{"id":"https://openalex.org/W2152698440","doi":"https://doi.org/10.1093/database/bar003","title":"Quality assurance for the query and distribution systems of the RCSB Protein Data Bank","display_name":"Quality assurance for the query and distribution systems of the RCSB Protein Data Bank","publication_year":2011,"publication_date":"2011-03-07","ids":{"openalex":"https://openalex.org/W2152698440","doi":"https://doi.org/10.1093/database/bar003","mag":"2152698440","pmid":"https://pubmed.ncbi.nlm.nih.gov/21382834"},"language":"en","primary_location":{"id":"doi:10.1093/database/bar003","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bar003","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bar003/1254617/bar003.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bar003/1254617/bar003.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053815083","display_name":"Wolfgang F. Bluhm","orcid":null},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"W. F. Bluhm","raw_affiliation_strings":["University of California San Diego, La Jolla, CA 92093-0743, USA. wbluhm@ucsd.edu","San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"University of California San Diego, La Jolla, CA 92093-0743, USA. wbluhm@ucsd.edu","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033691629","display_name":"Bojan Beran","orcid":null},"institutions":[{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]},{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Beran","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065072281","display_name":"Bi Chen","orcid":"https://orcid.org/0000-0002-3586-6141"},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]},{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C. Bi","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074348793","display_name":"Dimitris Dimitropoulos","orcid":null},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]},{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Dimitropoulos","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077634829","display_name":"Andreas Prli\u0107","orcid":"https://orcid.org/0000-0001-6346-6391"},"institutions":[{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Prlic","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043470769","display_name":"Gregory B. Quinn","orcid":null},"institutions":[{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]},{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"G. B. Quinn","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070583038","display_name":"Peter W. Rose","orcid":"https://orcid.org/0000-0001-9981-9750"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. W. Rose","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061319881","display_name":"Chirag Shah","orcid":"https://orcid.org/0000-0002-3797-4293"},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]},{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C. Shah","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006418591","display_name":"Jasmine Young","orcid":"https://orcid.org/0000-0001-8896-6878"},"institutions":[{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Young","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004505377","display_name":"Benjamin T. Yukich","orcid":null},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]},{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Yukich","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071896859","display_name":"Helen M. Berman","orcid":"https://orcid.org/0000-0002-3337-0660"},"institutions":[{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]},{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"H. M. Berman","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075833022","display_name":"Philip E. Bourne","orcid":"https://orcid.org/0000-0002-7618-7292"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I181653535","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07","country_code":"US","type":"facility","lineage":["https://openalex.org/I181653535","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. E. Bourne","raw_affiliation_strings":["San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA"],"affiliations":[{"raw_affiliation_string":"San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, 2Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854-8087, USA and 3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, Mail code 0743, La Jolla, CA 92093-0743, USA","institution_ids":["https://openalex.org/I181653535","https://openalex.org/I36258959","https://openalex.org/I102322142"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5053815083"],"corresponding_institution_ids":["https://openalex.org/I102322142","https://openalex.org/I181653535","https://openalex.org/I36258959"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.667,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.69636836,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2011","issue":"0","first_page":"bar003","last_page":"bar003"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.8935023546218872},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6895753145217896},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank","score":0.6571549773216248},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.49575337767601013},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4451175332069397},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4447583556175232},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.41089341044425964},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11213579773902893},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.08575469255447388}],"concepts":[{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.8935023546218872},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6895753145217896},{"id":"https://openalex.org/C119145174","wikidata":"https://www.wikidata.org/wiki/Q7251429","display_name":"Protein Data Bank","level":3,"score":0.6571549773216248},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.49575337767601013},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4451175332069397},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4447583556175232},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.41089341044425964},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11213579773902893},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.08575469255447388},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/database/bar003","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bar003","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bar003/1254617/bar003.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:21382834","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21382834","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:osti.gov:1625300","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1625300","pdf_url":"https://www.osti.gov/servlets/purl/1625300","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:alma.01RUT_INST:11664965410004646","is_oa":false,"landing_page_url":"https://scholarship.libraries.rutgers.edu/esploro/outputs/journalArticle/Quality-assurance-for-the-query-and/991031665629904646","pdf_url":null,"source":{"id":"https://openalex.org/S4210197018","display_name":"View","issn_l":"2688-268X","issn":["2688-268X","2688-3988"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt5jt3p1cc","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/5jt3p1cc","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database, vol 2011, iss 0","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3056270","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3056270","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bar003","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bar003","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bar003/1254617/bar003.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.44999998807907104,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G2276489800","display_name":"PDB Management by the Research Collaboratory for Structural Bioinformatics","funder_award_id":"0829586","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8292114156","display_name":null,"funder_award_id":"DBI 0829586","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320332603","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337357","display_name":"National Institute of Diabetes and Digestive and Kidney Diseases","ror":"https://ror.org/00adh9b73"},{"id":"https://openalex.org/F4320337359","display_name":"National Institute of Neurological Disorders and Stroke","ror":"https://ror.org/01s5ya894"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"},{"id":"https://openalex.org/F4320337398","display_name":"Division of Biological Infrastructure","ror":"https://ror.org/04qn9mx93"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2152698440.pdf","grobid_xml":"https://content.openalex.org/works/W2152698440.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1995808589","https://openalex.org/W2002506464","https://openalex.org/W2002861821","https://openalex.org/W2024081008","https://openalex.org/W2028532640","https://openalex.org/W2032838501","https://openalex.org/W2060795628","https://openalex.org/W2061742318","https://openalex.org/W2100827887","https://openalex.org/W2107251251","https://openalex.org/W2124200821","https://openalex.org/W2124410686","https://openalex.org/W2130479394","https://openalex.org/W2134815007","https://openalex.org/W2147809382","https://openalex.org/W2150556577","https://openalex.org/W2150852650","https://openalex.org/W2166458835","https://openalex.org/W2170441710","https://openalex.org/W2991064287"],"related_works":["https://openalex.org/W2020669016","https://openalex.org/W2088162897","https://openalex.org/W2090630809","https://openalex.org/W4387804157","https://openalex.org/W2106612397","https://openalex.org/W2518314460","https://openalex.org/W2119891507","https://openalex.org/W2089869950","https://openalex.org/W2589205199","https://openalex.org/W2047544230"],"abstract_inverted_index":{"The":[0,20,41],"RCSB":[1,67,86],"Protein":[2],"Data":[3],"Bank":[4],"(RCSB":[5],"PDB,":[6],"www.pdb.org)":[7],"is":[8,22],"a":[9],"key":[10],"online":[11],"resource":[12],"for":[13,84,102,111,129],"structural":[14],"biology":[15],"and":[16,32,43,63,70,76,97,108,115,119,122],"related":[17],"scientific":[18],"disciplines.":[19],"website":[21,88],"used":[23],"on":[24,53],"average":[25],"by":[26],"165,000":[27],"unique":[28],"visitors":[29],"per":[30],"month,":[31],"more":[33],"than":[34],"2000":[35],"other":[36,131],"websites":[37,132],"link":[38],"to":[39],"it.":[40],"amount":[42],"complexity":[44],"of":[45,65],"PDB":[46,68,87],"data":[47],"as":[48,50],"well":[49],"the":[51,61,66,85],"expectations":[52],"its":[54],"usage":[55],"are":[56,73],"growing":[57],"rapidly.":[58],"Therefore,":[59],"ensuring":[60],"reliability":[62],"robustness":[64],"query":[69],"distribution":[71],"systems":[72],"crucially":[74],"important":[75],"increasingly":[77],"challenging.":[78],"This":[79],"article":[80],"describes":[81],"quality":[82],"assurance":[83],"at":[89],"several":[90],"distinct":[91],"levels,":[92],"including:":[93],"(i)":[94],"hardware":[95],"redundancy":[96],"failover,":[98],"(ii)":[99],"testing":[100,107],"protocols":[101],"weekly":[103],"database":[104],"updates,":[105],"(iii)":[106],"release":[109],"procedures":[110],"major":[112],"software":[113],"updates":[114],"(iv)":[116],"miscellaneous":[117],"monitoring":[118],"troubleshooting":[120],"tools":[121],"practices.":[123],"As":[124],"such":[125],"it":[126],"provides":[127],"suggestions":[128],"how":[130],"might":[133],"be":[134],"operated.":[135]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
