{"id":"https://openalex.org/W2991331105","doi":"https://doi.org/10.1093/bioinformatics/btz841","title":"HypercubeME: two hundred million combinatorially complete datasets from a single experiment","display_name":"HypercubeME: two hundred million combinatorially complete datasets from a single experiment","publication_year":2019,"publication_date":"2019-11-18","ids":{"openalex":"https://openalex.org/W2991331105","doi":"https://doi.org/10.1093/bioinformatics/btz841","mag":"2991331105","pmid":"https://pubmed.ncbi.nlm.nih.gov/31742320"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz841","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz841","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1960/32915557/btz841.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1960/32915557/btz841.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110651730","display_name":"Laura Avino Esteban","orcid":null},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Laura\u00a0A Esteban","raw_affiliation_strings":["Universitat Pompeu Fabra (UPF) , Barcelona 08003, Spain"],"affiliations":[{"raw_affiliation_string":"Universitat Pompeu Fabra (UPF) , Barcelona 08003, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040453454","display_name":"Lyubov R Lonishin","orcid":null},"institutions":[{"id":"https://openalex.org/I212220629","display_name":"Peter the Great St. Petersburg Polytechnic University","ror":"https://ror.org/02x91aj62","country_code":"RU","type":"education","lineage":["https://openalex.org/I212220629"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Lyubov R Lonishin","raw_affiliation_strings":["Faculty of Medical Physics, Institute of Biomedical System and Technologies, Peter the Great Saint Petersburg Polytechnic University , Saint Petersburg 195251, Russia"],"affiliations":[{"raw_affiliation_string":"Faculty of Medical Physics, Institute of Biomedical System and Technologies, Peter the Great Saint Petersburg Polytechnic University , Saint Petersburg 195251, Russia","institution_ids":["https://openalex.org/I212220629"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033239945","display_name":"Daniil M. Bobrovskiy","orcid":null},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Daniil M Bobrovskiy","raw_affiliation_strings":["Faculty of Bioengineering and Bioinformatics, Moscow State University , Moscow 119234, Russia"],"affiliations":[{"raw_affiliation_string":"Faculty of Bioengineering and Bioinformatics, Moscow State University , Moscow 119234, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052160986","display_name":"Gregory Leleytner","orcid":null},"institutions":[{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I4210089467","display_name":"Institute of Physics and Technology","ror":"https://ror.org/005n3yy14","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210089467"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Gregory Leleytner","raw_affiliation_strings":["Department of Innovation and High Technology, Moscow Institute of Physics and Technology , Moscow 141701, Russia"],"affiliations":[{"raw_affiliation_string":"Department of Innovation and High Technology, Moscow Institute of Physics and Technology , Moscow 141701, Russia","institution_ids":["https://openalex.org/I4210089467","https://openalex.org/I153845743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003443383","display_name":"Natalya S. Bogatyreva","orcid":"https://orcid.org/0000-0002-1719-1136"},"institutions":[{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I4210137602","display_name":"Institute of Protein Research","ror":"https://ror.org/0489f0s93","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210137602"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES","RU"],"is_corresponding":false,"raw_author_name":"Natalya S Bogatyreva","raw_affiliation_strings":["Bioinformatics and Genomics Programme, Center for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology , 08003 Barcelona, Spain","Laboratory of Protein Physics, Institute of Protein Research of the Russian Academy of Sciences , Moscow 142290, Russia","Universitat Pompeu Fabra (UPF) , Barcelona 08003, Spain"],"affiliations":[{"raw_affiliation_string":"Bioinformatics and Genomics Programme, Center for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology , 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"Laboratory of Protein Physics, Institute of Protein Research of the Russian Academy of Sciences , Moscow 142290, Russia","institution_ids":["https://openalex.org/I4210137602"]},{"raw_affiliation_string":"Universitat Pompeu Fabra (UPF) , Barcelona 08003, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072121403","display_name":"Fyodor A. Kondrashov","orcid":"https://orcid.org/0000-0001-8243-4694"},"institutions":[{"id":"https://openalex.org/I157556583","display_name":"Institute of Science and Technology Austria","ror":"https://ror.org/03gnh5541","country_code":"AT","type":"education","lineage":["https://openalex.org/I157556583"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Fyodor A Kondrashov","raw_affiliation_strings":["Institute of Science and Technology Austria , 3400 Klosterneuburg, Austria"],"affiliations":[{"raw_affiliation_string":"Institute of Science and Technology Austria , 3400 Klosterneuburg, Austria","institution_ids":["https://openalex.org/I157556583"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028642432","display_name":"Dmitry N. Ivankov","orcid":"https://orcid.org/0000-0002-8224-4118"},"institutions":[{"id":"https://openalex.org/I125989756","display_name":"Skolkovo Institute of Science and Technology","ror":"https://ror.org/03f9nc143","country_code":"RU","type":"education","lineage":["https://openalex.org/I125989756"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Dmitry N Ivankov","raw_affiliation_strings":["Center of Life Sciences, Skolkovo Institute of Science and Technology , Moscow 121205, Russia"],"affiliations":[{"raw_affiliation_string":"Center of Life Sciences, Skolkovo Institute of Science and Technology , Moscow 121205, Russia","institution_ids":["https://openalex.org/I125989756"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5028642432"],"corresponding_institution_ids":["https://openalex.org/I125989756"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.1786,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.64791098,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"36","issue":"6","first_page":"1960","last_page":"1962"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epistasis","display_name":"Epistasis","score":0.9025802612304688},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5835797786712646},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5764693021774292},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5185261964797974},{"id":"https://openalex.org/keywords/curse-of-dimensionality","display_name":"Curse of dimensionality","score":0.49333325028419495},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.46282726526260376},{"id":"https://openalex.org/keywords/hypercube","display_name":"Hypercube","score":0.4575241804122925},{"id":"https://openalex.org/keywords/mutagenesis","display_name":"Mutagenesis","score":0.4326443076133728},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.40884503722190857},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.38518720865249634},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2877765893936157},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22190594673156738},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10799163579940796},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.10578688979148865}],"concepts":[{"id":"https://openalex.org/C61727976","wikidata":"https://www.wikidata.org/wiki/Q751748","display_name":"Epistasis","level":3,"score":0.9025802612304688},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5835797786712646},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5764693021774292},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5185261964797974},{"id":"https://openalex.org/C111030470","wikidata":"https://www.wikidata.org/wiki/Q1430460","display_name":"Curse of dimensionality","level":2,"score":0.49333325028419495},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.46282726526260376},{"id":"https://openalex.org/C50820777","wikidata":"https://www.wikidata.org/wiki/Q213723","display_name":"Hypercube","level":2,"score":0.4575241804122925},{"id":"https://openalex.org/C16318435","wikidata":"https://www.wikidata.org/wiki/Q149299","display_name":"Mutagenesis","level":4,"score":0.4326443076133728},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.40884503722190857},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.38518720865249634},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2877765893936157},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22190594673156738},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10799163579940796},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.10578688979148865},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btz841","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz841","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1960/32915557/btz841.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31742320","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31742320","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:repositori-api.upf.edu:10230/45879","is_oa":true,"landing_page_url":"http://hdl.handle.net/10230/45879","pdf_url":null,"source":{"id":"https://openalex.org/S4306402615","display_name":"Repositori digital de la UPF (Universitat Pompeu Fabra)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I170486558","host_organization_name":"Universitat Pompeu Fabra","host_organization_lineage":["https://openalex.org/I170486558"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:7703787","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7703787","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz841","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz841","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1960/32915557/btz841.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320317174","display_name":"Centre de Regulaci\u00f3 Gen\u00f2mica","ror":"https://ror.org/03wyzt892"},{"id":"https://openalex.org/F4320338335","display_name":"H2020 European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2991331105.pdf","grobid_xml":"https://content.openalex.org/works/W2991331105.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1526446139","https://openalex.org/W2016185554","https://openalex.org/W2073171022","https://openalex.org/W2339766289","https://openalex.org/W2379594833","https://openalex.org/W2573833626","https://openalex.org/W2615678788","https://openalex.org/W2767078712","https://openalex.org/W2790509526","https://openalex.org/W2889211202","https://openalex.org/W2937251344","https://openalex.org/W2950308590","https://openalex.org/W2951905689","https://openalex.org/W6749268652"],"related_works":["https://openalex.org/W2916710807","https://openalex.org/W2413588304","https://openalex.org/W2774705104","https://openalex.org/W4286907761","https://openalex.org/W2009411567","https://openalex.org/W3205447645","https://openalex.org/W2097769911","https://openalex.org/W2371629703","https://openalex.org/W2122785676","https://openalex.org/W72835634"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-23T05:10:03.516525","created_date":"2025-10-10T00:00:00"}
