{"id":"https://openalex.org/W2987335406","doi":"https://doi.org/10.1093/bioinformatics/btz828","title":"QMEANDisCo\u2014distance constraints applied on model quality estimation","display_name":"QMEANDisCo\u2014distance constraints applied on model quality estimation","publication_year":2019,"publication_date":"2019-11-06","ids":{"openalex":"https://openalex.org/W2987335406","doi":"https://doi.org/10.1093/bioinformatics/btz828","mag":"2987335406","pmid":"https://pubmed.ncbi.nlm.nih.gov/31697312"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz828","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz828","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1765/32915393/btz828.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1765/32915393/btz828.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053683682","display_name":"Gabriel Studer","orcid":"https://orcid.org/0000-0003-0462-1456"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Gabriel Studer","raw_affiliation_strings":["Biozentrum, University of Basel , Basel 4056, Switzerland","SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland"],"affiliations":[{"raw_affiliation_string":"Biozentrum, University of Basel , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031325756","display_name":"Christine Rempfer","orcid":"https://orcid.org/0000-0002-0672-3897"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Christine Rempfer","raw_affiliation_strings":["Biozentrum, University of Basel , Basel 4056, Switzerland","SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland"],"affiliations":[{"raw_affiliation_string":"Biozentrum, University of Basel , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039618816","display_name":"Andrew Waterhouse","orcid":"https://orcid.org/0009-0004-5717-6063"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Andrew M Waterhouse","raw_affiliation_strings":["Biozentrum, University of Basel , Basel 4056, Switzerland","SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland"],"affiliations":[{"raw_affiliation_string":"Biozentrum, University of Basel , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060490044","display_name":"Rafal Gumienny","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Rafal Gumienny","raw_affiliation_strings":["Biozentrum, University of Basel , Basel 4056, Switzerland","SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland"],"affiliations":[{"raw_affiliation_string":"Biozentrum, University of Basel , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008152480","display_name":"Juergen Haas","orcid":"https://orcid.org/0000-0002-3255-7773"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Juergen Haas","raw_affiliation_strings":["Biozentrum, University of Basel , Basel 4056, Switzerland","SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland"],"affiliations":[{"raw_affiliation_string":"Biozentrum, University of Basel , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049569891","display_name":"Torsten Schwede","orcid":"https://orcid.org/0000-0003-2715-335X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Torsten Schwede","raw_affiliation_strings":["Biozentrum, University of Basel , Basel 4056, Switzerland","SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland"],"affiliations":[{"raw_affiliation_string":"Biozentrum, University of Basel , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics , Basel 4056, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5049569891"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I1850255"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":71.5965,"has_fulltext":false,"cited_by_count":1016,"citation_normalized_percentile":{"value":0.99990248,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"36","issue":"6","first_page":"1765","last_page":"1771"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10876","display_name":"Fault Detection and Control Systems","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10876","display_name":"Fault Detection and Control Systems","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11236","display_name":"Control Systems and Identification","score":0.989300012588501,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10928","display_name":"Probabilistic and Robust Engineering Design","score":0.9776999950408936,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/estimation","display_name":"Estimation","score":0.7028217315673828},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.635427713394165},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.5832235217094421},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.3332088589668274},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.23251873254776},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.06258460879325867}],"concepts":[{"id":"https://openalex.org/C96250715","wikidata":"https://www.wikidata.org/wiki/Q965330","display_name":"Estimation","level":2,"score":0.7028217315673828},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.635427713394165},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.5832235217094421},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.3332088589668274},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23251873254776},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.06258460879325867},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btz828","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz828","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1765/32915393/btz828.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31697312","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31697312","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmid:32048708","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32048708","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:edoc.unibas.ch:72647","is_oa":false,"landing_page_url":"https://edoc.unibas.ch/72647/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401836","display_name":"edoc (University of Basel)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1850255","host_organization_name":"University of Basel","host_organization_lineage":["https://openalex.org/I1850255"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:6034297","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7075525","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:7178391","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7178391","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz828","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz828","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1765/32915393/btz828.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.47999998927116394,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320331322","display_name":"Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2987335406.pdf","grobid_xml":"https://content.openalex.org/works/W2987335406.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1972276034","https://openalex.org/W1994550454","https://openalex.org/W2008708467","https://openalex.org/W2011345135","https://openalex.org/W2015403140","https://openalex.org/W2028440694","https://openalex.org/W2033357321","https://openalex.org/W2051210555","https://openalex.org/W2081556853","https://openalex.org/W2096495474","https://openalex.org/W2103986334","https://openalex.org/W2106154817","https://openalex.org/W2110483430","https://openalex.org/W2111872356","https://openalex.org/W2113267464","https://openalex.org/W2119228200","https://openalex.org/W2120230374","https://openalex.org/W2130672128","https://openalex.org/W2140673705","https://openalex.org/W2141783940","https://openalex.org/W2145268834","https://openalex.org/W2149605074","https://openalex.org/W2153187042","https://openalex.org/W2159614853","https://openalex.org/W2168321064","https://openalex.org/W2170471837","https://openalex.org/W2171419407","https://openalex.org/W2534288757","https://openalex.org/W2594725344","https://openalex.org/W2609811411","https://openalex.org/W2748374366","https://openalex.org/W2770647690","https://openalex.org/W2804822363","https://openalex.org/W2889674656","https://openalex.org/W2894445194","https://openalex.org/W2949382809","https://openalex.org/W2951639995","https://openalex.org/W3198971594","https://openalex.org/W4234714728"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":40},{"year":2025,"cited_by_count":166},{"year":2024,"cited_by_count":223},{"year":2023,"cited_by_count":177},{"year":2022,"cited_by_count":183},{"year":2021,"cited_by_count":169},{"year":2020,"cited_by_count":55}],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2019-11-22T00:00:00"}
