{"id":"https://openalex.org/W2983296017","doi":"https://doi.org/10.1093/bioinformatics/btz815","title":"PRODIGY: personalized prioritization of driver genes","display_name":"PRODIGY: personalized prioritization of driver genes","publication_year":2019,"publication_date":"2019-10-30","ids":{"openalex":"https://openalex.org/W2983296017","doi":"https://doi.org/10.1093/bioinformatics/btz815","mag":"2983296017","pmid":"https://pubmed.ncbi.nlm.nih.gov/31681944"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz815","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz815","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1831/32915523/btz815.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1831/32915523/btz815.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062850341","display_name":"Gal Dinstag","orcid":"https://orcid.org/0009-0004-3942-9629"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Gal Dinstag","raw_affiliation_strings":["Blavatnik School of Computer Science, Tel-Aviv University , Tel Aviv 6997801, Israel"],"affiliations":[{"raw_affiliation_string":"Blavatnik School of Computer Science, Tel-Aviv University , Tel Aviv 6997801, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038806020","display_name":"Ron Shamir","orcid":"https://orcid.org/0000-0003-1889-9870"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Ron Shamir","raw_affiliation_strings":["Blavatnik School of Computer Science, Tel-Aviv University , Tel Aviv 6997801, Israel"],"affiliations":[{"raw_affiliation_string":"Blavatnik School of Computer Science, Tel-Aviv University , Tel Aviv 6997801, Israel","institution_ids":["https://openalex.org/I16391192"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5038806020"],"corresponding_institution_ids":["https://openalex.org/I16391192"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.9756,"has_fulltext":true,"cited_by_count":58,"citation_normalized_percentile":{"value":0.87142776,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"36","issue":"6","first_page":"1831","last_page":"1839"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6463762521743774},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5098928213119507},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.4656318724155426},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4352347254753113},{"id":"https://openalex.org/keywords/prioritization","display_name":"Prioritization","score":0.4229593873023987},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.41114482283592224},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3784043788909912},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.35790586471557617},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3070176839828491}],"concepts":[{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6463762521743774},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5098928213119507},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.4656318724155426},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4352347254753113},{"id":"https://openalex.org/C2777615720","wikidata":"https://www.wikidata.org/wiki/Q11888847","display_name":"Prioritization","level":2,"score":0.4229593873023987},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.41114482283592224},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3784043788909912},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.35790586471557617},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3070176839828491},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btz815","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz815","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1831/32915523/btz815.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31681944","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31681944","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7703777","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7703777","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz815","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz815","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/6/1831/32915523/btz815.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.6100000143051147}],"awards":[{"id":"https://openalex.org/G3711085794","display_name":null,"funder_award_id":"1339/18","funder_id":"https://openalex.org/F4320322252","funder_display_name":"Israel Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320312914","display_name":"Blavatnik Family Foundation","ror":null},{"id":"https://openalex.org/F4320322252","display_name":"Israel Science Foundation","ror":"https://ror.org/04sazxf24"},{"id":"https://openalex.org/F4320322596","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2983296017.pdf","grobid_xml":"https://content.openalex.org/works/W2983296017.grobid-xml"},"referenced_works_count":66,"referenced_works":["https://openalex.org/W117704561","https://openalex.org/W173585903","https://openalex.org/W1579271636","https://openalex.org/W1864161604","https://openalex.org/W1880949099","https://openalex.org/W1986241711","https://openalex.org/W1992826811","https://openalex.org/W2009720434","https://openalex.org/W2022495797","https://openalex.org/W2038809664","https://openalex.org/W2042778855","https://openalex.org/W2044433401","https://openalex.org/W2044702943","https://openalex.org/W2045582876","https://openalex.org/W2058539819","https://openalex.org/W2059300459","https://openalex.org/W2066861312","https://openalex.org/W2068523052","https://openalex.org/W2072810564","https://openalex.org/W2074613642","https://openalex.org/W2076865561","https://openalex.org/W2077098920","https://openalex.org/W2087025655","https://openalex.org/W2088891952","https://openalex.org/W2096173332","https://openalex.org/W2096283457","https://openalex.org/W2096766502","https://openalex.org/W2102140136","https://openalex.org/W2112947018","https://openalex.org/W2122796622","https://openalex.org/W2127611185","https://openalex.org/W2131876608","https://openalex.org/W2132623845","https://openalex.org/W2139227366","https://openalex.org/W2140563244","https://openalex.org/W2141152663","https://openalex.org/W2144940507","https://openalex.org/W2147714160","https://openalex.org/W2149082178","https://openalex.org/W2152176732","https://openalex.org/W2158485828","https://openalex.org/W2159482845","https://openalex.org/W2168303063","https://openalex.org/W2174632898","https://openalex.org/W2179438025","https://openalex.org/W2180481128","https://openalex.org/W2206969062","https://openalex.org/W2262414037","https://openalex.org/W2546500680","https://openalex.org/W2557187647","https://openalex.org/W2558715006","https://openalex.org/W2560367415","https://openalex.org/W2606778219","https://openalex.org/W2626754773","https://openalex.org/W2737623232","https://openalex.org/W2739902663","https://openalex.org/W2762107751","https://openalex.org/W2784142616","https://openalex.org/W2805428254","https://openalex.org/W2917581429","https://openalex.org/W2950753203","https://openalex.org/W2950945059","https://openalex.org/W4248142848","https://openalex.org/W6604799420","https://openalex.org/W6607055750","https://openalex.org/W6675104955"],"related_works":["https://openalex.org/W2506292322","https://openalex.org/W4283209547","https://openalex.org/W4367627632","https://openalex.org/W653452717","https://openalex.org/W2554445088","https://openalex.org/W3088013537","https://openalex.org/W2621003306","https://openalex.org/W2335661150","https://openalex.org/W1595456161","https://openalex.org/W4210478379"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":14},{"year":2024,"cited_by_count":13},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":13},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":3}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
