{"id":"https://openalex.org/W2966817341","doi":"https://doi.org/10.1093/bioinformatics/btz574","title":"Bayesian inference of distributed time delay in transcriptional and translational regulation","display_name":"Bayesian inference of distributed time delay in transcriptional and translational regulation","publication_year":2019,"publication_date":"2019-07-24","ids":{"openalex":"https://openalex.org/W2966817341","doi":"https://doi.org/10.1093/bioinformatics/btz574","mag":"2966817341","pmid":"https://pubmed.ncbi.nlm.nih.gov/31347688"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz574","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz574","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/2/586/31962697/btz574.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/36/2/586/31962697/btz574.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037306919","display_name":"Boseung Choi","orcid":"https://orcid.org/0000-0001-7512-118X"},"institutions":[{"id":"https://openalex.org/I1317225278","display_name":"Statistics Korea","ror":"https://ror.org/004g7jm05","country_code":"KR","type":"government","lineage":["https://openalex.org/I1317225278","https://openalex.org/I2801339556","https://openalex.org/I4210126005"]},{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Boseung Choi","raw_affiliation_strings":["Department of National Statistics, Korea University Sejong Campus , Sejong 30019, Korea"],"affiliations":[{"raw_affiliation_string":"Department of National Statistics, Korea University Sejong Campus , Sejong 30019, Korea","institution_ids":["https://openalex.org/I197347611","https://openalex.org/I1317225278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047649404","display_name":"Yu\u2010Yu Cheng","orcid":"https://orcid.org/0000-0002-9173-7344"},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yu-Yu Cheng","raw_affiliation_strings":["Department of Biochemistry, University of Wisconsin-Madison , Madison, WI 53706, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Wisconsin-Madison , Madison, WI 53706, USA","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014170457","display_name":"Selahattin \u00c7\u0131nar","orcid":"https://orcid.org/0000-0002-9049-0044"},"institutions":[{"id":"https://openalex.org/I44461941","display_name":"University of Houston","ror":"https://ror.org/048sx0r50","country_code":"US","type":"education","lineage":["https://openalex.org/I44461941"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Selahattin Cinar","raw_affiliation_strings":["Department of Mathematics, University of Houston , Houston, TX 77204, USA"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Houston , Houston, TX 77204, USA","institution_ids":["https://openalex.org/I44461941"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042091553","display_name":"William Ott","orcid":"https://orcid.org/0000-0002-7119-491X"},"institutions":[{"id":"https://openalex.org/I44461941","display_name":"University of Houston","ror":"https://ror.org/048sx0r50","country_code":"US","type":"education","lineage":["https://openalex.org/I44461941"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William Ott","raw_affiliation_strings":["Department of Mathematics, University of Houston , Houston, TX 77204, USA"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Houston , Houston, TX 77204, USA","institution_ids":["https://openalex.org/I44461941"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053287366","display_name":"Matthew R. Bennett","orcid":"https://orcid.org/0000-0002-4975-8854"},"institutions":[{"id":"https://openalex.org/I74775410","display_name":"Rice University","ror":"https://ror.org/008zs3103","country_code":"US","type":"education","lineage":["https://openalex.org/I74775410"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew R Bennett","raw_affiliation_strings":["Department of Bioengineering, Rice University , Houston, TX 77005, USA","Department of Biosciences, Rice University , Houston, TX 77005, USA"],"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, Rice University , Houston, TX 77005, USA","institution_ids":["https://openalex.org/I74775410"]},{"raw_affiliation_string":"Department of Biosciences, Rice University , Houston, TX 77005, USA","institution_ids":["https://openalex.org/I74775410"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020814624","display_name":"Kre\u0161imir Josi\u0107\u0301","orcid":"https://orcid.org/0000-0002-1975-3913"},"institutions":[{"id":"https://openalex.org/I44461941","display_name":"University of Houston","ror":"https://ror.org/048sx0r50","country_code":"US","type":"education","lineage":["https://openalex.org/I44461941"]},{"id":"https://openalex.org/I74775410","display_name":"Rice University","ror":"https://ror.org/008zs3103","country_code":"US","type":"education","lineage":["https://openalex.org/I74775410"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kre\u0161imir Josi\u0107","raw_affiliation_strings":["Department of Biology and Biochemistry, University of Houston , Houston, TX 77204, USA","Department of Biosciences, Rice University , Houston, TX 77005, USA","Department of Mathematics, University of Houston , Houston, TX 77204, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biology and Biochemistry, University of Houston , Houston, TX 77204, USA","institution_ids":["https://openalex.org/I44461941"]},{"raw_affiliation_string":"Department of Biosciences, Rice University , Houston, TX 77005, USA","institution_ids":["https://openalex.org/I74775410"]},{"raw_affiliation_string":"Department of Mathematics, University of Houston , Houston, TX 77204, USA","institution_ids":["https://openalex.org/I44461941"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067034493","display_name":"Jae Kyoung Kim","orcid":null},"institutions":[{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Jae Kyoung Kim","raw_affiliation_strings":["Department of Mathematical Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Mathematical Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Korea","institution_ids":["https://openalex.org/I157485424"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5020814624","https://openalex.org/A5067034493"],"corresponding_institution_ids":["https://openalex.org/I157485424","https://openalex.org/I44461941","https://openalex.org/I74775410"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.2882,"has_fulltext":true,"cited_by_count":33,"citation_normalized_percentile":{"value":0.80180189,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"36","issue":"2","first_page":"586","last_page":"593"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.9682000279426575,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9488000273704529,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.7077705264091492},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6310440301895142},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.6085047721862793},{"id":"https://openalex.org/keywords/bayesian-inference","display_name":"Bayesian inference","score":0.5162367820739746},{"id":"https://openalex.org/keywords/statistical-inference","display_name":"Statistical inference","score":0.4219723343849182},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33885225653648376},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.3326689600944519},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3217906355857849},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21167993545532227},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.20777034759521484},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.17885276675224304}],"concepts":[{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.7077705264091492},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6310440301895142},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.6085047721862793},{"id":"https://openalex.org/C160234255","wikidata":"https://www.wikidata.org/wiki/Q812535","display_name":"Bayesian inference","level":3,"score":0.5162367820739746},{"id":"https://openalex.org/C134261354","wikidata":"https://www.wikidata.org/wiki/Q938438","display_name":"Statistical inference","level":2,"score":0.4219723343849182},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33885225653648376},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.3326689600944519},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3217906355857849},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21167993545532227},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.20777034759521484},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.17885276675224304}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btz574","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz574","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/2/586/31962697/btz574.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31347688","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31347688","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7868000","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7868000","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz574","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz574","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/2/586/31962697/btz574.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.7599999904632568}],"awards":[{"id":"https://openalex.org/G1002502107","display_name":null,"funder_award_id":"NRF-2016 RICIB 3008468","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G3289633681","display_name":null,"funder_award_id":"C-1729","funder_id":"https://openalex.org/F4320306196","funder_display_name":"Welch Foundation"},{"id":"https://openalex.org/G4036068232","display_name":null,"funder_award_id":"DMS 1662290","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6019667623","display_name":null,"funder_award_id":"DMS 1816315","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6369817466","display_name":null,"funder_award_id":"RO1 GM117138","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G685982641","display_name":null,"funder_award_id":"NRF-2017R1D1A3B03031008","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G8247888387","display_name":null,"funder_award_id":"DMS 1662305","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306196","display_name":"Welch Foundation","ror":"https://ror.org/00np6vq88"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2966817341.pdf","grobid_xml":"https://content.openalex.org/works/W2966817341.grobid-xml"},"referenced_works_count":63,"referenced_works":["https://openalex.org/W137653784","https://openalex.org/W1499965417","https://openalex.org/W1540505601","https://openalex.org/W1966062610","https://openalex.org/W1969101909","https://openalex.org/W1980570931","https://openalex.org/W1981354971","https://openalex.org/W1984217390","https://openalex.org/W1994263912","https://openalex.org/W2005535920","https://openalex.org/W2005776378","https://openalex.org/W2013178787","https://openalex.org/W2017899835","https://openalex.org/W2021872116","https://openalex.org/W2022984362","https://openalex.org/W2024137973","https://openalex.org/W2031822229","https://openalex.org/W2042942320","https://openalex.org/W2053156756","https://openalex.org/W2057107775","https://openalex.org/W2058131374","https://openalex.org/W2058419903","https://openalex.org/W2069500900","https://openalex.org/W2073045768","https://openalex.org/W2081970839","https://openalex.org/W2088925327","https://openalex.org/W2089961542","https://openalex.org/W2091198609","https://openalex.org/W2100118577","https://openalex.org/W2103049317","https://openalex.org/W2105057212","https://openalex.org/W2109353395","https://openalex.org/W2111167674","https://openalex.org/W2114870653","https://openalex.org/W2118274513","https://openalex.org/W2120196508","https://openalex.org/W2123368367","https://openalex.org/W2125744693","https://openalex.org/W2127006594","https://openalex.org/W2131048952","https://openalex.org/W2132828256","https://openalex.org/W2136771204","https://openalex.org/W2136796925","https://openalex.org/W2138538544","https://openalex.org/W2138835511","https://openalex.org/W2147078972","https://openalex.org/W2147745135","https://openalex.org/W2167244112","https://openalex.org/W2167378113","https://openalex.org/W2168282770","https://openalex.org/W2214664370","https://openalex.org/W2309771944","https://openalex.org/W2311223887","https://openalex.org/W2345364694","https://openalex.org/W2748084525","https://openalex.org/W2805468500","https://openalex.org/W2891471842","https://openalex.org/W2950586838","https://openalex.org/W3098928821","https://openalex.org/W3105845768","https://openalex.org/W4205814206","https://openalex.org/W6679842528","https://openalex.org/W6688550661"],"related_works":["https://openalex.org/W137830373","https://openalex.org/W3000984192","https://openalex.org/W2103073163","https://openalex.org/W4286952477","https://openalex.org/W4321348134","https://openalex.org/W4387929287","https://openalex.org/W2372267530","https://openalex.org/W1981934814","https://openalex.org/W2969189870","https://openalex.org/W3015855446"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
