{"id":"https://openalex.org/W2945631735","doi":"https://doi.org/10.1093/bioinformatics/btz399","title":"Prediction of survival risks with adjusted gene expression through risk-gene networks","display_name":"Prediction of survival risks with adjusted gene expression through risk-gene networks","publication_year":2019,"publication_date":"2019-05-08","ids":{"openalex":"https://openalex.org/W2945631735","doi":"https://doi.org/10.1093/bioinformatics/btz399","mag":"2945631735","pmid":"https://pubmed.ncbi.nlm.nih.gov/31095279"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz399","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz399","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101544150","display_name":"Minhyeok Lee","orcid":"https://orcid.org/0000-0003-2562-172X"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Minhyeok Lee","raw_affiliation_strings":["School of Electrical Engineering, Korea University , Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"School of Electrical Engineering, Korea University , Seoul, South Korea","institution_ids":["https://openalex.org/I197347611"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024995454","display_name":"Sung Won Han","orcid":"https://orcid.org/0000-0002-0040-3542"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Sung Won Han","raw_affiliation_strings":["School of Industrial Management Engineering, Korea University , Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"School of Industrial Management Engineering, Korea University , Seoul, South Korea","institution_ids":["https://openalex.org/I197347611"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069534195","display_name":"Junhee Seok","orcid":"https://orcid.org/0000-0002-6475-8457"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Junhee Seok","raw_affiliation_strings":["School of Electrical Engineering, Korea University , Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"School of Electrical Engineering, Korea University , Seoul, South Korea","institution_ids":["https://openalex.org/I197347611"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5024995454","https://openalex.org/A5069534195"],"corresponding_institution_ids":["https://openalex.org/I197347611"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.2557,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.55114988,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"35","issue":"23","first_page":"4898","last_page":"4906"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.972100019454956,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.6586422324180603},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5502623319625854},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5370496511459351},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.510700523853302},{"id":"https://openalex.org/keywords/intuition","display_name":"Intuition","score":0.49930524826049805},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4990541934967041},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.44059455394744873},{"id":"https://openalex.org/keywords/regression","display_name":"Regression","score":0.4351280629634857},{"id":"https://openalex.org/keywords/gene-co-expression-network","display_name":"Gene co-expression network","score":0.43053194880485535},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.34960800409317017},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3446924090385437},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33724212646484375},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.3297322392463684},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.20953333377838135},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19515526294708252},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1115976870059967}],"concepts":[{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.6586422324180603},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5502623319625854},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5370496511459351},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.510700523853302},{"id":"https://openalex.org/C132010649","wikidata":"https://www.wikidata.org/wiki/Q189222","display_name":"Intuition","level":2,"score":0.49930524826049805},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4990541934967041},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.44059455394744873},{"id":"https://openalex.org/C83546350","wikidata":"https://www.wikidata.org/wiki/Q1139051","display_name":"Regression","level":2,"score":0.4351280629634857},{"id":"https://openalex.org/C2778022302","wikidata":"https://www.wikidata.org/wiki/Q18207329","display_name":"Gene co-expression network","level":5,"score":0.43053194880485535},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.34960800409317017},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3446924090385437},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33724212646484375},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.3297322392463684},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.20953333377838135},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19515526294708252},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1115976870059967},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btz399","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz399","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31095279","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31095279","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4099999964237213,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G5111390771","display_name":null,"funder_award_id":"K1719881","funder_id":"https://openalex.org/F4320321373","funder_display_name":"Korea University"},{"id":"https://openalex.org/G904438332","display_name":null,"funder_award_id":"K1822881","funder_id":"https://openalex.org/F4320321373","funder_display_name":"Korea University"}],"funders":[{"id":"https://openalex.org/F4320321373","display_name":"Korea University","ror":"https://ror.org/047dqcg40"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1930774693","https://openalex.org/W1972632700","https://openalex.org/W1995213405","https://openalex.org/W2001334414","https://openalex.org/W2010573862","https://openalex.org/W2026918499","https://openalex.org/W2032388524","https://openalex.org/W2037796411","https://openalex.org/W2051718666","https://openalex.org/W2057734084","https://openalex.org/W2073109785","https://openalex.org/W2094678200","https://openalex.org/W2110397906","https://openalex.org/W2111501574","https://openalex.org/W2117135012","https://openalex.org/W2130410032","https://openalex.org/W2133131759","https://openalex.org/W2138986862","https://openalex.org/W2141055671","https://openalex.org/W2143891888","https://openalex.org/W2149199519","https://openalex.org/W2154431984","https://openalex.org/W2164786997","https://openalex.org/W2288688156","https://openalex.org/W2289788816","https://openalex.org/W2322659453","https://openalex.org/W2345210474","https://openalex.org/W2545647509","https://openalex.org/W2546093131","https://openalex.org/W2559588208","https://openalex.org/W2565904822","https://openalex.org/W2596432151","https://openalex.org/W2611594661","https://openalex.org/W2618219496","https://openalex.org/W2618884399","https://openalex.org/W2626481916","https://openalex.org/W2782573192","https://openalex.org/W2790295707","https://openalex.org/W2792709886","https://openalex.org/W2802392794","https://openalex.org/W2964304355","https://openalex.org/W4229873072"],"related_works":["https://openalex.org/W2130939068","https://openalex.org/W3163717165","https://openalex.org/W2114466827","https://openalex.org/W249159571","https://openalex.org/W2791736663","https://openalex.org/W2806770614","https://openalex.org/W2129949791","https://openalex.org/W2131550814","https://openalex.org/W1710460698","https://openalex.org/W3199739261"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}