{"id":"https://openalex.org/W2948269756","doi":"https://doi.org/10.1093/bioinformatics/btz228","title":"Figure and caption extraction from biomedical documents","display_name":"Figure and caption extraction from biomedical documents","publication_year":2019,"publication_date":"2019-04-03","ids":{"openalex":"https://openalex.org/W2948269756","doi":"https://doi.org/10.1093/bioinformatics/btz228","mag":"2948269756","pmid":"https://pubmed.ncbi.nlm.nih.gov/30949681"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz228","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz228","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/21/4381/30330814/btz228.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/21/4381/30330814/btz228.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067099783","display_name":"Pengyuan Li","orcid":"https://orcid.org/0000-0002-8205-7611"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Pengyuan Li","raw_affiliation_strings":["Department of Computer and Information Sciences, University of Delaware , Newark, DE, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware , Newark, DE, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029696274","display_name":"Xiangying Jiang","orcid":null},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiangying Jiang","raw_affiliation_strings":["Department of Computer and Information Sciences, University of Delaware , Newark, DE, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware , Newark, DE, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5107218585","display_name":"Hagit Shatkay","orcid":null},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Hagit Shatkay","raw_affiliation_strings":["Department of Computer and Information Sciences, University of Delaware , Newark, DE, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware , Newark, DE, USA","institution_ids":["https://openalex.org/I86501945"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5067099783","https://openalex.org/A5107218585"],"corresponding_institution_ids":["https://openalex.org/I86501945"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.46,"has_fulltext":true,"cited_by_count":44,"citation_normalized_percentile":{"value":0.82127023,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"35","issue":"21","first_page":"4381","last_page":"4388"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9817000031471252,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13523","display_name":"Mathematics, Computing, and Information Processing","score":0.9747999906539917,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8499692678451538},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.788597822189331},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6482217311859131},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6471789479255676},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.632118284702301},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4874449074268341},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.48371317982673645},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.39764463901519775},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3949694037437439},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.19535034894943237}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8499692678451538},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.788597822189331},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6482217311859131},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6471789479255676},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.632118284702301},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4874449074268341},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.48371317982673645},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.39764463901519775},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3949694037437439},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.19535034894943237},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btz228","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz228","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/21/4381/30330814/btz228.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30949681","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30949681","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:5796537","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6821181","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz228","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz228","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/21/4381/30330814/btz228.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.44999998807907104,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G2887819486","display_name":null,"funder_award_id":"R56LM011354","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4585225537","display_name":null,"funder_award_id":"R01LM012527","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G7744054851","display_name":null,"funder_award_id":"R56LM011354","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G8119267997","display_name":null,"funder_award_id":"R01LM012527","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2948269756.pdf","grobid_xml":"https://content.openalex.org/works/W2948269756.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1970545216","https://openalex.org/W1972950646","https://openalex.org/W1988832870","https://openalex.org/W1994352714","https://openalex.org/W2000941677","https://openalex.org/W2015031017","https://openalex.org/W2048022386","https://openalex.org/W2053673723","https://openalex.org/W2063865897","https://openalex.org/W2073982987","https://openalex.org/W2102672399","https://openalex.org/W2104544690","https://openalex.org/W2133525847","https://openalex.org/W2135164809","https://openalex.org/W2139069711","https://openalex.org/W2145819879","https://openalex.org/W2158295445","https://openalex.org/W2168074160","https://openalex.org/W2398933260","https://openalex.org/W2509752429","https://openalex.org/W2571037679","https://openalex.org/W2733857666","https://openalex.org/W2762282176","https://openalex.org/W2786189816","https://openalex.org/W2789861020","https://openalex.org/W2915391685","https://openalex.org/W3023411394","https://openalex.org/W3106422812","https://openalex.org/W6680258410"],"related_works":["https://openalex.org/W3004288456","https://openalex.org/W4362496998","https://openalex.org/W2184397297","https://openalex.org/W1663435917","https://openalex.org/W2810079151","https://openalex.org/W2572241437","https://openalex.org/W2164881856","https://openalex.org/W2103320915","https://openalex.org/W3092715749","https://openalex.org/W3040870191"],"abstract_inverted_index":{"Our":[0],"system":[1],"is":[2],"publicly":[3],"available":[4,14],"for":[5],"use":[6],"at:":[7,15],"https://www.eecis.udel.edu/~compbio/PDFigCapX.":[8],"The":[9],"two":[10],"new":[11],"datasets":[12],"are":[13],"https://www.eecis.udel.edu/~compbio/PDFigCapX/Downloads.":[16]},"counts_by_year":[{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":8}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
