{"id":"https://openalex.org/W2894848101","doi":"https://doi.org/10.1093/bioinformatics/bty859","title":"Inferring disease-associated long non-coding RNAs using genome-wide tissue expression profiles","display_name":"Inferring disease-associated long non-coding RNAs using genome-wide tissue expression profiles","publication_year":2018,"publication_date":"2018-10-04","ids":{"openalex":"https://openalex.org/W2894848101","doi":"https://doi.org/10.1093/bioinformatics/bty859","mag":"2894848101","pmid":"https://pubmed.ncbi.nlm.nih.gov/30295698"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty859","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty859","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091365447","display_name":"Xiaoyong Pan","orcid":"https://orcid.org/0000-0001-5010-464X"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I2801134892","display_name":"Novo Nordisk Foundation","ror":"https://ror.org/04txyc737","country_code":"DK","type":"facility","lineage":["https://openalex.org/I2801134892"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Xiaoyong Pan","raw_affiliation_strings":["Department of Veterinary and Animal Sciences, Center for Non-coding RNA in Technology and Health, University of Copenhagen, Frederiksberg C, Denmark","Disease Systems Biology Program, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen N, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Veterinary and Animal Sciences, Center for Non-coding RNA in Technology and Health, University of Copenhagen, Frederiksberg C, Denmark","institution_ids":["https://openalex.org/I124055696"]},{"raw_affiliation_string":"Disease Systems Biology Program, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen N, Denmark","institution_ids":["https://openalex.org/I2801134892","https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005772961","display_name":"Lars Juhl Jensen","orcid":"https://orcid.org/0000-0001-7885-715X"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I2801134892","display_name":"Novo Nordisk Foundation","ror":"https://ror.org/04txyc737","country_code":"DK","type":"facility","lineage":["https://openalex.org/I2801134892"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"Lars Juhl Jensen","raw_affiliation_strings":["Disease Systems Biology Program, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen N, Denmark"],"affiliations":[{"raw_affiliation_string":"Disease Systems Biology Program, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen N, Denmark","institution_ids":["https://openalex.org/I2801134892","https://openalex.org/I124055696"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004614832","display_name":"Jan Gorodkin","orcid":"https://orcid.org/0000-0001-5823-4000"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"Jan Gorodkin","raw_affiliation_strings":["Department of Veterinary and Animal Sciences, Center for Non-coding RNA in Technology and Health, University of Copenhagen, Frederiksberg C, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Veterinary and Animal Sciences, Center for Non-coding RNA in Technology and Health, University of Copenhagen, Frederiksberg C, Denmark","institution_ids":["https://openalex.org/I124055696"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5004614832","https://openalex.org/A5005772961"],"corresponding_institution_ids":["https://openalex.org/I124055696","https://openalex.org/I2801134892"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.3495,"has_fulltext":false,"cited_by_count":24,"citation_normalized_percentile":{"value":0.78083268,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"35","issue":"9","first_page":"1494","last_page":"1502"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5696006417274475},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5658149719238281},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.5441537499427795},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5301904082298279},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4796772003173828},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.4325691759586334},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3576256036758423},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3476247191429138},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21036410331726074},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.09973546862602234},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.06478527188301086}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5696006417274475},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5658149719238281},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.5441537499427795},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5301904082298279},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4796772003173828},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.4325691759586334},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3576256036758423},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3476247191429138},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21036410331726074},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.09973546862602234},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.06478527188301086},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bty859","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty859","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30295698","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30295698","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/812713ed-fd7d-423f-b29b-6a658533348f","is_oa":false,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/812713ed-fd7d-423f-b29b-6a658533348f","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Pan , X , Jensen , L J & Gorodkin , J 2019 , ' Inferring disease-associated long non-coding RNAs using genome - wide tissue expression profiles ' , Bioinformatics , vol. 35 , no. 9 , pp. 1494-1502 . https://doi.org/10.1093/bioinformatics/bty859","raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1766184556","display_name":null,"funder_award_id":"0603-00320B","funder_id":"https://openalex.org/F4320313796","funder_display_name":"Innovationsfonden"},{"id":"https://openalex.org/G6662978750","display_name":null,"funder_award_id":"NNF14CC0001","funder_id":"https://openalex.org/F4320325957","funder_display_name":"Novo Nordisk Fonden"}],"funders":[{"id":"https://openalex.org/F4320313796","display_name":"Innovationsfonden","ror":"https://ror.org/00daj4111"},{"id":"https://openalex.org/F4320320945","display_name":"K\u00f8benhavns Universitet","ror":"https://ror.org/035b05819"},{"id":"https://openalex.org/F4320325957","display_name":"Novo Nordisk Fonden","ror":"https://ror.org/04txyc737"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":56,"referenced_works":["https://openalex.org/W1533942137","https://openalex.org/W1981409633","https://openalex.org/W1983275320","https://openalex.org/W2006358633","https://openalex.org/W2018570668","https://openalex.org/W2018838463","https://openalex.org/W2027762334","https://openalex.org/W2034368206","https://openalex.org/W2036568936","https://openalex.org/W2046831513","https://openalex.org/W2053039860","https://openalex.org/W2059185913","https://openalex.org/W2070777085","https://openalex.org/W2071879021","https://openalex.org/W2081098333","https://openalex.org/W2084185995","https://openalex.org/W2088069070","https://openalex.org/W2100667488","https://openalex.org/W2101234009","https://openalex.org/W2104406447","https://openalex.org/W2113868616","https://openalex.org/W2115746733","https://openalex.org/W2117446594","https://openalex.org/W2128983843","https://openalex.org/W2133567825","https://openalex.org/W2133696655","https://openalex.org/W2141458291","https://openalex.org/W2141831115","https://openalex.org/W2142019735","https://openalex.org/W2144086069","https://openalex.org/W2148603752","https://openalex.org/W2152970345","https://openalex.org/W2169456326","https://openalex.org/W2177146256","https://openalex.org/W2256102335","https://openalex.org/W2346094246","https://openalex.org/W2408796111","https://openalex.org/W2437043110","https://openalex.org/W2462108616","https://openalex.org/W2512000099","https://openalex.org/W2512308096","https://openalex.org/W2524881570","https://openalex.org/W2536862554","https://openalex.org/W2572986783","https://openalex.org/W2600749578","https://openalex.org/W2606172339","https://openalex.org/W2739216367","https://openalex.org/W2770098003","https://openalex.org/W2792450944","https://openalex.org/W2793017340","https://openalex.org/W2888027311","https://openalex.org/W2911964244","https://openalex.org/W2997591727","https://openalex.org/W4254721730","https://openalex.org/W6675354045","https://openalex.org/W6718962110"],"related_works":["https://openalex.org/W2086525401","https://openalex.org/W2006735166","https://openalex.org/W2079327011","https://openalex.org/W2053325634","https://openalex.org/W3178279768","https://openalex.org/W2987420353","https://openalex.org/W1491897707","https://openalex.org/W1969895229","https://openalex.org/W2108497208","https://openalex.org/W1970768498"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":4}],"updated_date":"2026-03-17T09:09:15.849793","created_date":"2025-10-10T00:00:00"}
