{"id":"https://openalex.org/W2892079508","doi":"https://doi.org/10.1093/bioinformatics/bty827","title":"iTerm-PseKNC: a sequence-based tool for predicting bacterial transcriptional terminators","display_name":"iTerm-PseKNC: a sequence-based tool for predicting bacterial transcriptional terminators","publication_year":2018,"publication_date":"2018-09-20","ids":{"openalex":"https://openalex.org/W2892079508","doi":"https://doi.org/10.1093/bioinformatics/bty827","mag":"2892079508","pmid":"https://pubmed.ncbi.nlm.nih.gov/30247625"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty827","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty827","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006282435","display_name":"Chao-Qin Feng","orcid":null},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chao-Qin Feng","raw_affiliation_strings":["Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073409235","display_name":"Zhao\u2010Yue Zhang","orcid":"https://orcid.org/0000-0002-4619-247X"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhao-Yue Zhang","raw_affiliation_strings":["Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065270673","display_name":"Xiaojuan Zhu","orcid":"https://orcid.org/0000-0003-2594-8968"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiao-Juan Zhu","raw_affiliation_strings":["Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110637482","display_name":"Yan Lin","orcid":"https://orcid.org/0009-0006-9829-1564"},"institutions":[{"id":"https://openalex.org/I37574244","display_name":"Sichuan Agricultural University","ror":"https://ror.org/0388c3403","country_code":"CN","type":"education","lineage":["https://openalex.org/I37574244"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Lin","raw_affiliation_strings":["Key Laboratory for Animal Disease Resistance Nutrition of the Ministry of Education, Animal Nutrition Institute, Sichuan Agricultural University, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory for Animal Disease Resistance Nutrition of the Ministry of Education, Animal Nutrition Institute, Sichuan Agricultural University, Chengdu, China","institution_ids":["https://openalex.org/I37574244"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100344463","display_name":"Wei Chen","orcid":"https://orcid.org/0000-0002-6857-7696"},"institutions":[{"id":"https://openalex.org/I137506752","display_name":"North China University of Science and Technology","ror":"https://ror.org/04z4wmb81","country_code":"CN","type":"education","lineage":["https://openalex.org/I137506752"]},{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wei Chen","raw_affiliation_strings":["Center for Genomics and Computational Biology, School of Life Sciences, North China University of Science and Technology, Tangshan, China","Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Center for Genomics and Computational Biology, School of Life Sciences, North China University of Science and Technology, Tangshan, China","institution_ids":["https://openalex.org/I137506752"]},{"raw_affiliation_string":"Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043530440","display_name":"Hua Tang","orcid":"https://orcid.org/0000-0001-6728-4544"},"institutions":[{"id":"https://openalex.org/I3017480383","display_name":"Southwest Medical University","ror":"https://ror.org/00g2rqs52","country_code":"CN","type":"funder","lineage":["https://openalex.org/I3017480383"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hua Tang","raw_affiliation_strings":["Department of Pathophysiology, Southwest Medical University, Luzhou, China"],"affiliations":[{"raw_affiliation_string":"Department of Pathophysiology, Southwest Medical University, Luzhou, China","institution_ids":["https://openalex.org/I3017480383"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041539298","display_name":"Hao Lin","orcid":"https://orcid.org/0000-0001-6265-2862"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hao Lin","raw_affiliation_strings":["Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5041539298","https://openalex.org/A5043530440","https://openalex.org/A5100344463"],"corresponding_institution_ids":["https://openalex.org/I137506752","https://openalex.org/I150229711","https://openalex.org/I3017480383"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":14.5217,"has_fulltext":false,"cited_by_count":222,"citation_normalized_percentile":{"value":0.99420251,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"35","issue":"9","first_page":"1469","last_page":"1477"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6534889340400696},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5342522859573364},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.505852222442627},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3302764892578125},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.28286004066467285}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6534889340400696},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5342522859573364},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.505852222442627},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3302764892578125},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28286004066467285}],"mesh":[{"descriptor_ui":"D001412","descriptor_name":"Bacillus subtilis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001412","descriptor_name":"Bacillus subtilis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001412","descriptor_name":"Bacillus subtilis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009711","descriptor_name":"Nucleotides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009711","descriptor_name":"Nucleotides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009711","descriptor_name":"Nucleotides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009876","descriptor_name":"Operon","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009876","descriptor_name":"Operon","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009876","descriptor_name":"Operon","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014158","descriptor_name":"Transcription, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014158","descriptor_name":"Transcription, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014158","descriptor_name":"Transcription, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bty827","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty827","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30247625","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30247625","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1739709948","display_name":null,"funder_award_id":"61772119","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1755459497","display_name":null,"funder_award_id":"ZYGX2016J125","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G2731577396","display_name":null,"funder_award_id":"ZYGX2015Z006","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G3040512177","display_name":null,"funder_award_id":"31771471","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4052108563","display_name":null,"funder_award_id":"61702430","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6231769588","display_name":null,"funder_award_id":"ZYGX2016J118","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":88,"referenced_works":["https://openalex.org/W1253096047","https://openalex.org/W1484114705","https://openalex.org/W1526664730","https://openalex.org/W1549877559","https://openalex.org/W1592870802","https://openalex.org/W1602283030","https://openalex.org/W1663797894","https://openalex.org/W1711085333","https://openalex.org/W1914245470","https://openalex.org/W1966807997","https://openalex.org/W1972265170","https://openalex.org/W1976882280","https://openalex.org/W1976978745","https://openalex.org/W1983808106","https://openalex.org/W1986784214","https://openalex.org/W1995285602","https://openalex.org/W2001349696","https://openalex.org/W2004132756","https://openalex.org/W2005436483","https://openalex.org/W2010201333","https://openalex.org/W2015990617","https://openalex.org/W2017775009","https://openalex.org/W2021823827","https://openalex.org/W2022889591","https://openalex.org/W2038873127","https://openalex.org/W2040183015","https://openalex.org/W2042286958","https://openalex.org/W2043296204","https://openalex.org/W2048279801","https://openalex.org/W2051514418","https://openalex.org/W2093567555","https://openalex.org/W2099298539","https://openalex.org/W2101536723","https://openalex.org/W2103525038","https://openalex.org/W2107337820","https://openalex.org/W2114024619","https://openalex.org/W2120026469","https://openalex.org/W2120900330","https://openalex.org/W2124266758","https://openalex.org/W2132247880","https://openalex.org/W2139166279","https://openalex.org/W2139212933","https://openalex.org/W2139695444","https://openalex.org/W2144539964","https://openalex.org/W2153635508","https://openalex.org/W2154053567","https://openalex.org/W2157642860","https://openalex.org/W2168012258","https://openalex.org/W2170747616","https://openalex.org/W2217901696","https://openalex.org/W2232370058","https://openalex.org/W2254740876","https://openalex.org/W2400814742","https://openalex.org/W2472502719","https://openalex.org/W2501904318","https://openalex.org/W2508405377","https://openalex.org/W2514534732","https://openalex.org/W2520682509","https://openalex.org/W2528774686","https://openalex.org/W2553132141","https://openalex.org/W2563322674","https://openalex.org/W2582058293","https://openalex.org/W2587688848","https://openalex.org/W2591975816","https://openalex.org/W2622345656","https://openalex.org/W2726111596","https://openalex.org/W2735537070","https://openalex.org/W2737592062","https://openalex.org/W2763789477","https://openalex.org/W2765199136","https://openalex.org/W2766389776","https://openalex.org/W2791600746","https://openalex.org/W2794797435","https://openalex.org/W2800333284","https://openalex.org/W2805110914","https://openalex.org/W2805791355","https://openalex.org/W2808950870","https://openalex.org/W2810225085","https://openalex.org/W2886373325","https://openalex.org/W2889300381","https://openalex.org/W2963614249","https://openalex.org/W4285719527","https://openalex.org/W6635200387","https://openalex.org/W6720570500","https://openalex.org/W6733365994","https://openalex.org/W6749192820","https://openalex.org/W6751150484","https://openalex.org/W6754283962"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189"],"abstract_inverted_index":{"For":[0],"the":[1,8,26,31],"convenience":[2],"of":[3,5],"most":[4],"wet-experimental":[6],"researchers,":[7],"web-server":[9],"for":[10],"'iTerm-PseKNC'":[11],"was":[12],"established":[13],"at":[14],"http://lin-group.cn/server/iTerm-PseKNC/,":[15],"by":[16],"which":[17],"users":[18],"can":[19],"easily":[20],"obtain":[21],"their":[22],"desired":[23],"result":[24],"without":[25],"need":[27],"to":[28],"go":[29],"through":[30],"detailed":[32],"mathematical":[33],"equations":[34],"involved.":[35]},"counts_by_year":[{"year":2026,"cited_by_count":8},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":19},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":18},{"year":2021,"cited_by_count":21},{"year":2020,"cited_by_count":57},{"year":2019,"cited_by_count":74},{"year":2018,"cited_by_count":4}],"updated_date":"2026-04-15T08:11:43.952461","created_date":"2025-10-10T00:00:00"}
