{"id":"https://openalex.org/W2892842742","doi":"https://doi.org/10.1093/bioinformatics/bty809","title":"Presenting and sharing clinical data using the eTRIKS Standards Master Tree for tranSMART","display_name":"Presenting and sharing clinical data using the eTRIKS Standards Master Tree for tranSMART","publication_year":2018,"publication_date":"2018-09-25","ids":{"openalex":"https://openalex.org/W2892842742","doi":"https://doi.org/10.1093/bioinformatics/bty809","mag":"2892842742","pmid":"https://pubmed.ncbi.nlm.nih.gov/30256906"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty809","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty809","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/9/1562/28557322/bty809.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/9/1562/28557322/bty809.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063632942","display_name":"Adriano Barbosa-Silva","orcid":"https://orcid.org/0000-0002-5260-2607"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I166337079","display_name":"Queen Mary University of London","ror":"https://ror.org/026zzn846","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I166337079"]}],"countries":["GB","LU"],"is_corresponding":true,"raw_author_name":"Adriano Barbosa-Silva","raw_affiliation_strings":["Department of Clinical Pharmacology, Centre for Translational Bioinformatics, William Harvey Research, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, Charterhouse Square, London EC1M6BQ, UK","University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Pharmacology, Centre for Translational Bioinformatics, William Harvey Research, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, Charterhouse Square, London EC1M6BQ, UK","institution_ids":["https://openalex.org/I166337079"]},{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088022627","display_name":"Dorina Bratfalean","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Dorina Bratfalean","raw_affiliation_strings":["CDISC, Clinical Data Interchange Standards Consortium and CDISC EU Foundation, Saint-Louis, Alsace, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CDISC, Clinical Data Interchange Standards Consortium and CDISC EU Foundation, Saint-Louis, Alsace, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043795951","display_name":"Wei Gu","orcid":"https://orcid.org/0000-0003-3951-6680"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Wei Gu","raw_affiliation_strings":["University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088017410","display_name":"Venkata Satagopam","orcid":"https://orcid.org/0000-0002-6532-5880"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Venkata Satagopam","raw_affiliation_strings":["University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020307480","display_name":"Paul D. Houston","orcid":"https://orcid.org/0000-0002-0612-5344"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paul Houston","raw_affiliation_strings":["CDISC, Clinical Data Interchange Standards Consortium and CDISC EU Foundation, Saint-Louis, Alsace, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CDISC, Clinical Data Interchange Standards Consortium and CDISC EU Foundation, Saint-Louis, Alsace, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028540543","display_name":"Lauren B. Becnel","orcid":"https://orcid.org/0000-0002-4899-1777"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lauren B Becnel","raw_affiliation_strings":["CDISC, Clinical Data Interchange Standards Consortium and CDISC EU Foundation, Saint-Louis, Alsace, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CDISC, Clinical Data Interchange Standards Consortium and CDISC EU Foundation, Saint-Louis, Alsace, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003317508","display_name":"Serge Eifes","orcid":null},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Serge Eifes","raw_affiliation_strings":["Information Technology for Translational Medicine (ITTM) S.A, Esch/Belval, Luxembourg","University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Information Technology for Translational Medicine (ITTM) S.A, Esch/Belval, Luxembourg","institution_ids":[]},{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111929798","display_name":"Fabien Richard","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fabien Richard","raw_affiliation_strings":["Centre National de la Recherche Scientifique (CNRS), Lyon, Auvergne-Rh\u00f4ne-Alpes, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre National de la Recherche Scientifique (CNRS), Lyon, Auvergne-Rh\u00f4ne-Alpes, France","institution_ids":["https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011733669","display_name":"Andreas Tielmann","orcid":null},"institutions":[{"id":"https://openalex.org/I164928964","display_name":"Merck (Germany)","ror":"https://ror.org/04b2dty93","country_code":"DE","type":"company","lineage":["https://openalex.org/I164928964"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Tielmann","raw_affiliation_strings":["Department of Research and Bioinformatics, Merck KGaA, Darmstadt, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Research and Bioinformatics, Merck KGaA, Darmstadt, Germany","institution_ids":["https://openalex.org/I164928964"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030119724","display_name":"Sascha Herzinger","orcid":"https://orcid.org/0000-0003-0935-2910"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Sascha Herzinger","raw_affiliation_strings":["University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011842139","display_name":"Kavita Rege","orcid":"https://orcid.org/0009-0008-5992-3391"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Kavita Rege","raw_affiliation_strings":["University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064019707","display_name":"Rudi Balling","orcid":"https://orcid.org/0000-0003-2902-5650"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Rudi Balling","raw_affiliation_strings":["University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077264769","display_name":"Paul Peeters","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paul Peeters","raw_affiliation_strings":["BioSci Consulting, Maasmechelen, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioSci Consulting, Maasmechelen, Belgium","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079833473","display_name":"Reinhard Schneider","orcid":"https://orcid.org/0000-0002-8278-1618"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Reinhard Schneider","raw_affiliation_strings":["University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, L-4371 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5063632942"],"corresponding_institution_ids":["https://openalex.org/I166337079","https://openalex.org/I186903577"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14849806,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"35","issue":"9","first_page":"1562","last_page":"1565"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.599399983882904,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.599399983882904,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.19779999554157257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.040699999779462814,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7802674174308777},{"id":"https://openalex.org/keywords/standardization","display_name":"Standardization","score":0.6940791606903076},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.6494985222816467},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.5454339981079102},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.5282251834869385},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5084749460220337},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42662087082862854},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3937082290649414},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1008726954460144}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7802674174308777},{"id":"https://openalex.org/C188087704","wikidata":"https://www.wikidata.org/wiki/Q369577","display_name":"Standardization","level":2,"score":0.6940791606903076},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.6494985222816467},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.5454339981079102},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.5282251834869385},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5084749460220337},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42662087082862854},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3937082290649414},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1008726954460144},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bty809","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty809","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/9/1562/28557322/bty809.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30256906","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30256906","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:orbilu.uni.lu:10993/36683","is_oa":true,"landing_page_url":"http://orbilu.uni.lu/handle/10993/36683","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-sa","license_id":"https://openalex.org/licenses/cc-by-nc-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, bty809 (2018)","raw_type":"peer reviewed"},{"id":"pmh:oai:pubmedcentral.nih.gov:6499239","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6499239","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty809","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty809","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/9/1562/28557322/bty809.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4233647439","display_name":null,"funder_award_id":"MR/S003827/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"}],"funders":[{"id":"https://openalex.org/F4320310700","display_name":"Universit\u00e9 du Luxembourg","ror":"https://ror.org/036x5ad56"},{"id":"https://openalex.org/F4320314178","display_name":"European Federation of Pharmaceutical Industries and Associations","ror":"https://ror.org/00g1x4v36"},{"id":"https://openalex.org/F4320325955","display_name":"Erzincan \u00dcniversitesi","ror":"https://ror.org/02h1e8605"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2892842742.pdf","grobid_xml":"https://content.openalex.org/works/W2892842742.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W192628470","https://openalex.org/W278411638","https://openalex.org/W1987777080","https://openalex.org/W2302501749","https://openalex.org/W2387057733","https://openalex.org/W2441924832","https://openalex.org/W2508021580","https://openalex.org/W2611562788","https://openalex.org/W2773787581","https://openalex.org/W4210950737","https://openalex.org/W6607827657","https://openalex.org/W6610116564","https://openalex.org/W6725315659"],"related_works":["https://openalex.org/W2378767206","https://openalex.org/W1540871478","https://openalex.org/W328308450","https://openalex.org/W282641168","https://openalex.org/W2376963063","https://openalex.org/W2066396794","https://openalex.org/W2366734808","https://openalex.org/W2002476357","https://openalex.org/W2391444248","https://openalex.org/W2390716080"],"abstract_inverted_index":{"MOTIVATION:":[0],"Standardization":[1],"and":[2,40,48,73,112,123,141,149],"semantic":[3],"alignment":[4],"have":[5],"been":[6],"considered":[7],"one":[8],"of":[9,21,44,61,91,108],"the":[10,22,29,42,59,65,78,106,161],"major":[11],"challenges":[12],"for":[13,58,95],"data":[14,26,45,93,113],"integration":[15],"in":[16],"clinical":[17,25,101],"research.":[18],"The":[19,81,136],"inclusion":[20],"CDISC":[23],"SDTM":[24,62,100],"standard":[27],"into":[28,64],"tranSMART":[30,66,130],"i2b2":[31,67],"via":[32],"a":[33,56,71,129,150],"guiding":[34],"master":[35,83],"ontology":[36],"tree":[37,68,84],"positively":[38],"impacts":[39],"supports":[41],"efficacy":[43],"sharing,":[46],"visualization":[47],"exploration":[49],"across":[50],"datasets.":[51],"RESULTS:":[52],"We":[53,103],"present":[54],"here":[55],"schema":[57],"organization":[60],"variables":[63],"along":[69],"with":[70],"script":[72],"test":[74,142],"dataset":[75],"to":[76,117],"exemplify":[77],"mapping":[79],"strategy.":[80],"eTRIKS":[82,137],"concept":[85],"is":[86],"demonstrated":[87],"by":[88],"making":[89],"use":[90],"fictitious":[92],"generated":[94],"four":[96],"patients,":[97],"including":[98],"16":[99],"domains.":[102],"describe":[104],"how":[105],"usage":[107],"correct":[109],"visit":[110],"names":[111],"labels":[114],"can":[115,164],"help":[116],"integrate":[118],"multiple":[119],"readouts":[120],"per":[121],"patient":[122],"avoid":[124],"ETL":[125],"crashes":[126],"when":[127],"running":[128],"loading":[131],"routine.":[132],"AVAILABILITY":[133],"AND":[134],"IMPLEMENTATION:":[135],"Master":[138],"Tree":[139,158],"package":[140],"datasets":[143],"are":[144],"publicly":[145],"available":[146],"at":[147,154],"https://doi.org/10.5281/zenodo.1009098":[148],"functional":[151],"demo":[152],"installation":[153],"https://public.etriks.org/transmart/datasetExplorer/":[155],"under":[156],"eTRIKS-Master":[157],"branch,":[159],"where":[160],"discussed":[162],"examples":[163],"be":[165],"visualized.":[166]},"counts_by_year":[],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
