{"id":"https://openalex.org/W2914355569","doi":"https://doi.org/10.1093/bioinformatics/bty804","title":"Integrating hypertension phenotype and genotype with hybrid non-negative matrix factorization","display_name":"Integrating hypertension phenotype and genotype with hybrid non-negative matrix factorization","publication_year":2018,"publication_date":"2018-09-14","ids":{"openalex":"https://openalex.org/W2914355569","doi":"https://doi.org/10.1093/bioinformatics/bty804","mag":"2914355569","pmid":"https://pubmed.ncbi.nlm.nih.gov/30239588"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty804","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty804","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/8/1395/28500663/bty804.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/8/1395/28500663/bty804.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100452550","display_name":"Yuan Luo","orcid":"https://orcid.org/0000-0003-0195-7456"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yuan Luo","raw_affiliation_strings":["Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074672910","display_name":"Chengsheng Mao","orcid":"https://orcid.org/0000-0002-1515-9626"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chengsheng Mao","raw_affiliation_strings":["Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068201000","display_name":"Yiben Yang","orcid":"https://orcid.org/0009-0001-2864-7442"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yiben Yang","raw_affiliation_strings":["Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100455758","display_name":"Fei Wang","orcid":"https://orcid.org/0000-0001-8908-5618"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fei Wang","raw_affiliation_strings":["Department of Healthcare Policy & Research, Weill Cornell Medicine, Cornell University New York, NY, USA"],"affiliations":[{"raw_affiliation_string":"Department of Healthcare Policy & Research, Weill Cornell Medicine, Cornell University New York, NY, USA","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035626083","display_name":"Faraz S. Ahmad","orcid":"https://orcid.org/0000-0002-2613-2541"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Faraz S Ahmad","raw_affiliation_strings":["Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026873580","display_name":"Donna K. Arnett","orcid":"https://orcid.org/0000-0003-2219-657X"},"institutions":[{"id":"https://openalex.org/I143302722","display_name":"University of Kentucky","ror":"https://ror.org/02k3smh20","country_code":"US","type":"education","lineage":["https://openalex.org/I143302722"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Donna Arnett","raw_affiliation_strings":["Department of Epidemiology, College of Public Health, University of Kentucky, Lexington, KY, USA"],"affiliations":[{"raw_affiliation_string":"Department of Epidemiology, College of Public Health, University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062964883","display_name":"Marguerite R. Irvin","orcid":"https://orcid.org/0000-0002-1442-2023"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marguerite R Irvin","raw_affiliation_strings":["Department of Epidemiology, University of Alabama at Birmingham, Birmingham, AL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Epidemiology, University of Alabama at Birmingham, Birmingham, AL, USA","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005215114","display_name":"Sanjiv J. Shah","orcid":"https://orcid.org/0000-0002-5655-8201"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sanjiv J Shah","raw_affiliation_strings":["Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5100452550"],"corresponding_institution_ids":["https://openalex.org/I111979921"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.5585,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.67180025,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"35","issue":"8","first_page":"1395","last_page":"1403"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9617999792098999,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9617999792098999,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/non-negative-matrix-factorization","display_name":"Non-negative matrix factorization","score":0.7625724077224731},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.615253746509552},{"id":"https://openalex.org/keywords/subtyping","display_name":"Subtyping","score":0.5379133820533752},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.5295926928520203},{"id":"https://openalex.org/keywords/matrix-decomposition","display_name":"Matrix decomposition","score":0.5285638570785522},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.51729416847229},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.4133192002773285},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4101622700691223},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35326650738716125},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.327020525932312},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3160216212272644},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.23910307884216309},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12565931677818298},{"id":"https://openalex.org/keywords/eigenvalues-and-eigenvectors","display_name":"Eigenvalues and eigenvectors","score":0.08177605271339417}],"concepts":[{"id":"https://openalex.org/C152671427","wikidata":"https://www.wikidata.org/wiki/Q10843505","display_name":"Non-negative matrix factorization","level":4,"score":0.7625724077224731},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.615253746509552},{"id":"https://openalex.org/C83852419","wikidata":"https://www.wikidata.org/wiki/Q2713292","display_name":"Subtyping","level":2,"score":0.5379133820533752},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.5295926928520203},{"id":"https://openalex.org/C42355184","wikidata":"https://www.wikidata.org/wiki/Q1361088","display_name":"Matrix decomposition","level":3,"score":0.5285638570785522},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.51729416847229},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.4133192002773285},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4101622700691223},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35326650738716125},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.327020525932312},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3160216212272644},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.23910307884216309},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12565931677818298},{"id":"https://openalex.org/C158693339","wikidata":"https://www.wikidata.org/wiki/Q190524","display_name":"Eigenvalues and eigenvectors","level":2,"score":0.08177605271339417},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006973","descriptor_name":"Hypertension","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006973","descriptor_name":"Hypertension","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006973","descriptor_name":"Hypertension","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bty804","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty804","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/8/1395/28500663/bty804.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30239588","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30239588","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:6103327","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6477985","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty804","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty804","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/8/1395/28500663/bty804.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1067560820","display_name":null,"funder_award_id":"IIS-1750326","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G1153322124","display_name":null,"funder_award_id":"N00014-18-1-2585","funder_id":"https://openalex.org/F4320337345","funder_display_name":"Office of Naval Research"},{"id":"https://openalex.org/G1200760863","display_name":null,"funder_award_id":"#15CVGPSD27260148","funder_id":"https://openalex.org/F4320306230","funder_display_name":"American Heart Association"},{"id":"https://openalex.org/G2671397083","display_name":null,"funder_award_id":"1R21LM012618-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5794704315","display_name":null,"funder_award_id":"IIS-1716432","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G616500512","display_name":null,"funder_award_id":"R01 HL107577","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306230","display_name":"American Heart Association","ror":"https://ror.org/013kjyp64"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337345","display_name":"Office of Naval Research","ror":"https://ror.org/00rk2pe57"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2914355569.pdf","grobid_xml":"https://content.openalex.org/works/W2914355569.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1556386043","https://openalex.org/W1563940013","https://openalex.org/W1752064231","https://openalex.org/W1902027874","https://openalex.org/W1980740976","https://openalex.org/W1984068087","https://openalex.org/W1992644002","https://openalex.org/W2014426141","https://openalex.org/W2024356620","https://openalex.org/W2041437149","https://openalex.org/W2061587734","https://openalex.org/W2065760681","https://openalex.org/W2090247362","https://openalex.org/W2093492509","https://openalex.org/W2096465161","https://openalex.org/W2103686416","https://openalex.org/W2110096996","https://openalex.org/W2130186565","https://openalex.org/W2138945157","https://openalex.org/W2140141449","https://openalex.org/W2150199950","https://openalex.org/W2154790710","https://openalex.org/W2160995259","https://openalex.org/W2168103112","https://openalex.org/W2168133698","https://openalex.org/W2425519618","https://openalex.org/W2468477102","https://openalex.org/W2556399337","https://openalex.org/W2592007282","https://openalex.org/W2597217516","https://openalex.org/W2603863902","https://openalex.org/W2783685429","https://openalex.org/W3098758500","https://openalex.org/W4210524013","https://openalex.org/W4211188855","https://openalex.org/W4230962320","https://openalex.org/W4298053217","https://openalex.org/W4298826872","https://openalex.org/W6633399112","https://openalex.org/W6633589378","https://openalex.org/W6691995666","https://openalex.org/W6729761056"],"related_works":["https://openalex.org/W4390394189","https://openalex.org/W2037504162","https://openalex.org/W2539013788","https://openalex.org/W2792706544","https://openalex.org/W1568451138","https://openalex.org/W2156699640","https://openalex.org/W2045265907","https://openalex.org/W2972997031","https://openalex.org/W2146544734","https://openalex.org/W2075222291"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2}],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
