{"id":"https://openalex.org/W2884893767","doi":"https://doi.org/10.1093/bioinformatics/bty629","title":"Determination of sets of covariating gene expression using graph analysis on pairwise expression ratios","display_name":"Determination of sets of covariating gene expression using graph analysis on pairwise expression ratios","publication_year":2018,"publication_date":"2018-07-13","ids":{"openalex":"https://openalex.org/W2884893767","doi":"https://doi.org/10.1093/bioinformatics/bty629","mag":"2884893767","pmid":"https://pubmed.ncbi.nlm.nih.gov/30010788"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty629","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty629","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/2/258/27497135/bty629.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/2/258/27497135/bty629.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001284001","display_name":"Emmanuel Curis","orcid":"https://orcid.org/0000-0001-8382-1493"},"institutions":[{"id":"https://openalex.org/I110736937","display_name":"D\u00e9l\u00e9gation Paris 5","ror":"https://ror.org/02e0y6e06","country_code":"FR","type":"government","lineage":["https://openalex.org/I110736937","https://openalex.org/I154526488"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I169173203","display_name":"D\u00e9l\u00e9gation Paris 7","ror":"https://ror.org/00bw5n526","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488","https://openalex.org/I169173203"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210091437","display_name":"Sorbonne Paris Cit\u00e9","ror":"https://ror.org/001z21q04","country_code":"FR","type":"other","lineage":["https://openalex.org/I4210091437"]},{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]},{"id":"https://openalex.org/I4210144610","display_name":"H\u00f4pital Saint-Louis","ror":"https://ror.org/049am9t04","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159","https://openalex.org/I4210144610"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Emmanuel Curis","raw_affiliation_strings":["Laboratoire de Biomath\u00e9matiques, Facult\u00e9 de Pharmacie de Paris, Universit\u00e9 Paris Descartes, Sorbonne Paris Cit\u00e9, Paris F-75006, France","Service de Bioinformatique et Information M\u00e9dicale, H\u00f4pital Saint-Louis, AP-HP, Paris F-75012, France","UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France"],"affiliations":[{"raw_affiliation_string":"Laboratoire de Biomath\u00e9matiques, Facult\u00e9 de Pharmacie de Paris, Universit\u00e9 Paris Descartes, Sorbonne Paris Cit\u00e9, Paris F-75006, France","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I4210091437","https://openalex.org/I110736937"]},{"raw_affiliation_string":"Service de Bioinformatique et Information M\u00e9dicale, H\u00f4pital Saint-Louis, AP-HP, Paris F-75012, France","institution_ids":["https://openalex.org/I4210144610","https://openalex.org/I4210097159"]},{"raw_affiliation_string":"UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I169173203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105779043","display_name":"Cindie Courtin","orcid":null},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I169173203","display_name":"D\u00e9l\u00e9gation Paris 7","ror":"https://ror.org/00bw5n526","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488","https://openalex.org/I169173203"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Cindie Courtin","raw_affiliation_strings":["UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France"],"affiliations":[{"raw_affiliation_string":"UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I169173203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050706969","display_name":"Pierre A. Geoffroy","orcid":"https://orcid.org/0000-0001-9121-209X"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I169173203","display_name":"D\u00e9l\u00e9gation Paris 7","ror":"https://ror.org/00bw5n526","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488","https://openalex.org/I169173203"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Alexis Geoffroy","raw_affiliation_strings":["P\u00f4le de Psychiatrie et de M\u00e9decine, Addictologique GH Saint-Louis \u2013 Lariboisi\u00e8re \u2013 F. Widal AP-HP, Paris F-75475, France","UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France"],"affiliations":[{"raw_affiliation_string":"P\u00f4le de Psychiatrie et de M\u00e9decine, Addictologique GH Saint-Louis \u2013 Lariboisi\u00e8re \u2013 F. Widal AP-HP, Paris F-75475, France","institution_ids":["https://openalex.org/I4210097159"]},{"raw_affiliation_string":"UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I169173203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082594966","display_name":"Jean Laplanche","orcid":"https://orcid.org/0000-0003-2836-2903"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I169173203","display_name":"D\u00e9l\u00e9gation Paris 7","ror":"https://ror.org/00bw5n526","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488","https://openalex.org/I169173203"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Louis Laplanche","raw_affiliation_strings":["UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France"],"affiliations":[{"raw_affiliation_string":"UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I169173203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020813130","display_name":"Bruno Saubam\u00e9a","orcid":"https://orcid.org/0000-0002-6218-0460"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I169173203","display_name":"D\u00e9l\u00e9gation Paris 7","ror":"https://ror.org/00bw5n526","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488","https://openalex.org/I169173203"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Bruno Saubam\u00e9a","raw_affiliation_strings":["UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France"],"affiliations":[{"raw_affiliation_string":"UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I169173203"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5114374166","display_name":"Cynthia Marie\u2010Claire","orcid":"https://orcid.org/0000-0002-2282-134X"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I169173203","display_name":"D\u00e9l\u00e9gation Paris 7","ror":"https://ror.org/00bw5n526","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488","https://openalex.org/I169173203"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Cynthia Marie-Claire","raw_affiliation_strings":["UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France"],"affiliations":[{"raw_affiliation_string":"UMR S-1144 INSERM\u2014Universit\u00e9 Paris Descartes\u2014Universit\u00e9 Paris Diderot, Paris F-75006, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I169173203"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5001284001"],"corresponding_institution_ids":["https://openalex.org/I110736937","https://openalex.org/I154526488","https://openalex.org/I169173203","https://openalex.org/I204730241","https://openalex.org/I4210091437","https://openalex.org/I4210097159","https://openalex.org/I4210144610"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.0154,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.82648658,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"35","issue":"2","first_page":"258","last_page":"265"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12157","display_name":"Geochemistry and Geologic Mapping","score":0.9693999886512756,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12157","display_name":"Geochemistry and Geologic Mapping","score":0.9693999886512756,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9297999739646912,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9212999939918518,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.6904455423355103},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6720807552337646},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5731453895568848},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.565464198589325},{"id":"https://openalex.org/keywords/disjoint-sets","display_name":"Disjoint sets","score":0.5419429540634155},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4427383840084076},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.41448915004730225},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.33642876148223877},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.32283279299736023},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.23740270733833313},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.21894940733909607},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.10008826851844788}],"concepts":[{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.6904455423355103},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6720807552337646},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5731453895568848},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.565464198589325},{"id":"https://openalex.org/C45340560","wikidata":"https://www.wikidata.org/wiki/Q215382","display_name":"Disjoint sets","level":2,"score":0.5419429540634155},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4427383840084076},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.41448915004730225},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.33642876148223877},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.32283279299736023},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23740270733833313},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.21894940733909607},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.10008826851844788},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bty629","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty629","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/2/258/27497135/bty629.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30010788","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30010788","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-03033388v1","is_oa":true,"landing_page_url":"https://hal.science/hal-03033388","pdf_url":"https://hal.science/hal-03033388/document","source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2018, 35, pp.258 - 265. ⟨10.1093/bioinformatics/bty629⟩","raw_type":"Journal articles"},{"id":"pmh:oai:HAL:hal-01904746v1","is_oa":true,"landing_page_url":"https://hal.science/hal-01904746","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2018, ⟨10.1093/bioinformatics/bty629⟩","raw_type":"Journal articles"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty629","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty629","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/2/258/27497135/bty629.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1404270698","display_name":null,"funder_award_id":"NR-11-IDEX-0004-02","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G4009746975","display_name":null,"funder_award_id":"ANR-11-IDEX-0004-02","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G4866930200","display_name":null,"funder_award_id":"ANR-11-IDEX","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G5003875507","display_name":null,"funder_award_id":"-11-IDEX-0004-02","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G5615659713","display_name":null,"funder_award_id":"IDEX-0004-02","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6182026652","display_name":null,"funder_award_id":"11-IDEX-0004","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6246589203","display_name":null,"funder_award_id":"11-IDEX-0004-02","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6654833908","display_name":null,"funder_award_id":"ANR-11-IDEX-0004","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7823808512","display_name":null,"funder_award_id":"ANR-11-IDEX-000","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G8094503923","display_name":null,"funder_award_id":"ANR-11-IDEX-0004-02","funder_id":"https://openalex.org/F4320318134","funder_display_name":"Fondation FondaMental"},{"id":"https://openalex.org/G846706564","display_name":null,"funder_award_id":"ANR-11-IDEX-0004-0","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320318134","display_name":"Fondation FondaMental","ror":"https://ror.org/00rrhf939"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320320893","display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale","ror":"https://ror.org/02vjkv261"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2884893767.pdf","grobid_xml":"https://content.openalex.org/works/W2884893767.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W1577577364","https://openalex.org/W1951724000","https://openalex.org/W1968473875","https://openalex.org/W1971698866","https://openalex.org/W2022712608","https://openalex.org/W2025543856","https://openalex.org/W2039521726","https://openalex.org/W2047940964","https://openalex.org/W2061551655","https://openalex.org/W2063055942","https://openalex.org/W2093923965","https://openalex.org/W2107277218","https://openalex.org/W2109726592","https://openalex.org/W2113758107","https://openalex.org/W2113977541","https://openalex.org/W2123327278","https://openalex.org/W2125601829","https://openalex.org/W2128443399","https://openalex.org/W2168420558","https://openalex.org/W2169001731","https://openalex.org/W2169373818","https://openalex.org/W2173292682","https://openalex.org/W2179438025","https://openalex.org/W2211905129","https://openalex.org/W2326641739","https://openalex.org/W2334099820","https://openalex.org/W2343429629","https://openalex.org/W2510675082","https://openalex.org/W2561613850","https://openalex.org/W2576929122","https://openalex.org/W2582743722","https://openalex.org/W2743105407","https://openalex.org/W2904250115","https://openalex.org/W6608852248","https://openalex.org/W6678793509","https://openalex.org/W6730823237","https://openalex.org/W6732237580"],"related_works":["https://openalex.org/W2487162673","https://openalex.org/W2793211469","https://openalex.org/W2949152769","https://openalex.org/W4372354731","https://openalex.org/W2942366970","https://openalex.org/W4256429076","https://openalex.org/W2807634898","https://openalex.org/W1971174658","https://openalex.org/W2020053772","https://openalex.org/W2035433397"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}