{"id":"https://openalex.org/W2807186140","doi":"https://doi.org/10.1093/bioinformatics/bty458","title":"iEnhancer-EL: identifying enhancers and their strength with ensemble learning approach","display_name":"iEnhancer-EL: identifying enhancers and their strength with ensemble learning approach","publication_year":2018,"publication_date":"2018-06-06","ids":{"openalex":"https://openalex.org/W2807186140","doi":"https://doi.org/10.1093/bioinformatics/bty458","mag":"2807186140","pmid":"https://pubmed.ncbi.nlm.nih.gov/29878118"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty458","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty458","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/22/3835/26441591/bty458.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/22/3835/26441591/bty458.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100395591","display_name":"Bin Liu","orcid":"https://orcid.org/0000-0003-3685-9469"},"institutions":[{"id":"https://openalex.org/I4210098239","display_name":"The Gordon Life Science Institute","ror":"https://ror.org/0135ffj82","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210098239"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Bin Liu","raw_affiliation_strings":["Gordon Life Science Institute, Belmont, MA, USA","School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China"],"affiliations":[{"raw_affiliation_string":"Gordon Life Science Institute, Belmont, MA, USA","institution_ids":["https://openalex.org/I4210098239"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056214066","display_name":"Kai Li","orcid":"https://orcid.org/0000-0002-5505-7974"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Li","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060381913","display_name":"De-Shuang Huang","orcid":"https://orcid.org/0000-0002-6759-2691"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"De-Shuang Huang","raw_affiliation_strings":["Institute of Machine Learning and Systems Biology, School of Electronics and Information Engineering, Tongji University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Institute of Machine Learning and Systems Biology, School of Electronics and Information Engineering, Tongji University, Shanghai, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113500576","display_name":"Kuo\u2010Chen Chou","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098239","display_name":"The Gordon Life Science Institute","ror":"https://ror.org/0135ffj82","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210098239"]},{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Kuo-Chen Chou","raw_affiliation_strings":["Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China","Gordon Life Science Institute, Belmont, MA, USA"],"affiliations":[{"raw_affiliation_string":"Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]},{"raw_affiliation_string":"Gordon Life Science Institute, Belmont, MA, USA","institution_ids":["https://openalex.org/I4210098239"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5060381913","https://openalex.org/A5100395591","https://openalex.org/A5113500576"],"corresponding_institution_ids":["https://openalex.org/I116953780","https://openalex.org/I150229711","https://openalex.org/I204983213","https://openalex.org/I4210098239"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":11.6742,"has_fulltext":false,"cited_by_count":218,"citation_normalized_percentile":{"value":0.99159818,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"34","issue":"22","first_page":"3835","last_page":"3842"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6636998057365417},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.587004542350769},{"id":"https://openalex.org/keywords/enhancer","display_name":"Enhancer","score":0.5749660730361938},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.5527070760726929},{"id":"https://openalex.org/keywords/subsequence","display_name":"Subsequence","score":0.526646614074707},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.468483567237854},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4433351755142212},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4356009364128113},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.35746413469314575},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16904735565185547},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16612985730171204},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.15882638096809387},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.11779570579528809},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09841588139533997}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6636998057365417},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.587004542350769},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.5749660730361938},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.5527070760726929},{"id":"https://openalex.org/C137877099","wikidata":"https://www.wikidata.org/wiki/Q1332977","display_name":"Subsequence","level":3,"score":0.526646614074707},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.468483567237854},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4433351755142212},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4356009364128113},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.35746413469314575},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16904735565185547},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16612985730171204},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.15882638096809387},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.11779570579528809},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09841588139533997},{"id":"https://openalex.org/C34388435","wikidata":"https://www.wikidata.org/wiki/Q2267362","display_name":"Bounded function","level":2,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D009711","descriptor_name":"Nucleotides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009711","descriptor_name":"Nucleotides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009711","descriptor_name":"Nucleotides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bty458","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty458","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/22/3835/26441591/bty458.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29878118","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29878118","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty458","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty458","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/22/3835/26441591/bty458.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Reduced inequalities","score":0.7099999785423279,"id":"https://metadata.un.org/sdg/10"}],"awards":[{"id":"https://openalex.org/G3263865980","display_name":null,"funder_award_id":"61520106006","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G74711194","display_name":null,"funder_award_id":"61732012","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G75457812","display_name":null,"funder_award_id":"61672184","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2807186140.pdf","grobid_xml":"https://content.openalex.org/works/W2807186140.grobid-xml"},"referenced_works_count":98,"referenced_works":["https://openalex.org/W7721663","https://openalex.org/W1561712938","https://openalex.org/W1563088657","https://openalex.org/W1807324513","https://openalex.org/W1943237984","https://openalex.org/W1968361401","https://openalex.org/W1977927254","https://openalex.org/W1986865417","https://openalex.org/W1988334356","https://openalex.org/W1991141438","https://openalex.org/W1992577925","https://openalex.org/W1998064689","https://openalex.org/W1998306196","https://openalex.org/W2004132756","https://openalex.org/W2004216886","https://openalex.org/W2016015848","https://openalex.org/W2022965734","https://openalex.org/W2028549892","https://openalex.org/W2034070267","https://openalex.org/W2048356293","https://openalex.org/W2053963319","https://openalex.org/W2061881231","https://openalex.org/W2073700708","https://openalex.org/W2077467360","https://openalex.org/W2082247817","https://openalex.org/W2097571405","https://openalex.org/W2102354653","https://openalex.org/W2106141559","https://openalex.org/W2107425660","https://openalex.org/W2114024619","https://openalex.org/W2115272837","https://openalex.org/W2117792884","https://openalex.org/W2120026469","https://openalex.org/W2123525093","https://openalex.org/W2124266758","https://openalex.org/W2128817132","https://openalex.org/W2132247880","https://openalex.org/W2132292391","https://openalex.org/W2134854530","https://openalex.org/W2140240158","https://openalex.org/W2145957695","https://openalex.org/W2146628513","https://openalex.org/W2151754128","https://openalex.org/W2153635508","https://openalex.org/W2156125289","https://openalex.org/W2158698691","https://openalex.org/W2165232124","https://openalex.org/W2168602111","https://openalex.org/W2172162168","https://openalex.org/W2278741011","https://openalex.org/W2313411748","https://openalex.org/W2321308395","https://openalex.org/W2339812959","https://openalex.org/W2471518332","https://openalex.org/W2510820101","https://openalex.org/W2514430732","https://openalex.org/W2559068312","https://openalex.org/W2560732228","https://openalex.org/W2565121836","https://openalex.org/W2588467130","https://openalex.org/W2590653482","https://openalex.org/W2591130492","https://openalex.org/W2599457435","https://openalex.org/W2605516250","https://openalex.org/W2605763657","https://openalex.org/W2609394459","https://openalex.org/W2612935389","https://openalex.org/W2614370829","https://openalex.org/W2620316885","https://openalex.org/W2736742854","https://openalex.org/W2749697459","https://openalex.org/W2754289562","https://openalex.org/W2759893831","https://openalex.org/W2762315569","https://openalex.org/W2766389776","https://openalex.org/W2766812108","https://openalex.org/W2767196078","https://openalex.org/W2768705872","https://openalex.org/W2780936345","https://openalex.org/W2782893969","https://openalex.org/W2790865507","https://openalex.org/W2791600746","https://openalex.org/W2792363117","https://openalex.org/W2793168264","https://openalex.org/W2794797435","https://openalex.org/W2800333284","https://openalex.org/W2803011470","https://openalex.org/W2804489036","https://openalex.org/W2805791355","https://openalex.org/W4285719527","https://openalex.org/W4320800886","https://openalex.org/W6600307240","https://openalex.org/W6676236601","https://openalex.org/W6744949851","https://openalex.org/W6746060933","https://openalex.org/W6747408139","https://openalex.org/W6749192820","https://openalex.org/W6751150484"],"related_works":["https://openalex.org/W2113330652","https://openalex.org/W2996768723","https://openalex.org/W4212895949","https://openalex.org/W2061914098","https://openalex.org/W4230102134","https://openalex.org/W4247866870","https://openalex.org/W4393004084","https://openalex.org/W4309683845","https://openalex.org/W2118646732","https://openalex.org/W2112772040"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":15},{"year":2024,"cited_by_count":18},{"year":2023,"cited_by_count":24},{"year":2022,"cited_by_count":32},{"year":2021,"cited_by_count":36},{"year":2020,"cited_by_count":29},{"year":2019,"cited_by_count":34},{"year":2018,"cited_by_count":28}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
