{"id":"https://openalex.org/W2950437427","doi":"https://doi.org/10.1093/bioinformatics/bty1011","title":"Insights on protein thermal stability: a graph representation of molecular interactions","display_name":"Insights on protein thermal stability: a graph representation of molecular interactions","publication_year":2018,"publication_date":"2018-12-07","ids":{"openalex":"https://openalex.org/W2950437427","doi":"https://doi.org/10.1093/bioinformatics/bty1011","mag":"2950437427","pmid":"https://pubmed.ncbi.nlm.nih.gov/30535291"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty1011","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty1011","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/15/2569/29012458/bty1011.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/15/2569/29012458/bty1011.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080168003","display_name":"Mattia Miotto","orcid":"https://orcid.org/0000-0002-0043-8921"},"institutions":[{"id":"https://openalex.org/I30771326","display_name":"Italian Institute of Technology","ror":"https://ror.org/042t93s57","country_code":"IT","type":"facility","lineage":["https://openalex.org/I30771326"]},{"id":"https://openalex.org/I4210091015","display_name":"Istituto di Nanotecnologia","ror":"https://ror.org/00bc51d88","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210091015","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Mattia Miotto","raw_affiliation_strings":["Center for Life Nano Science@Sapienza, Instituto Italiano di Tecnologia, Viale Regina Elena, 291 Roma (RM), Italy","Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy","Soft and Living Matter Laboratory, Institute of Nanotechnology, Consiglio Nazionale delle Ricerche, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Life Nano Science@Sapienza, Instituto Italiano di Tecnologia, Viale Regina Elena, 291 Roma (RM), Italy","institution_ids":["https://openalex.org/I30771326"]},{"raw_affiliation_string":"Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy","institution_ids":["https://openalex.org/I861853513"]},{"raw_affiliation_string":"Soft and Living Matter Laboratory, Institute of Nanotechnology, Consiglio Nazionale delle Ricerche, Rome, Italy","institution_ids":["https://openalex.org/I4210091015","https://openalex.org/I4210155236"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028516477","display_name":"Pier Paolo Olimpieri","orcid":"https://orcid.org/0000-0001-7934-9034"},"institutions":[{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Pier Paolo Olimpieri","raw_affiliation_strings":["Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy","institution_ids":["https://openalex.org/I861853513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004111266","display_name":"Lorenzo Di Rienzo","orcid":"https://orcid.org/0000-0003-4114-5049"},"institutions":[{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Lorenzo Di Rienzo","raw_affiliation_strings":["Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy","institution_ids":["https://openalex.org/I861853513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024336074","display_name":"Francesco Ambrosetti","orcid":"https://orcid.org/0000-0003-1791-7555"},"institutions":[{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT","NL"],"is_corresponding":false,"raw_author_name":"Francesco Ambrosetti","raw_affiliation_strings":["Bijvoet Center for Biomolecular Research, Faculty of Science \u2013 Chemistry, Utrecht University, Padualaan 8, Utrecht, the Netherlands","Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bijvoet Center for Biomolecular Research, Faculty of Science \u2013 Chemistry, Utrecht University, Padualaan 8, Utrecht, the Netherlands","institution_ids":["https://openalex.org/I193662353"]},{"raw_affiliation_string":"Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy","institution_ids":["https://openalex.org/I861853513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077830332","display_name":"Pietro Corsi","orcid":"https://orcid.org/0000-0002-9245-1401"},"institutions":[{"id":"https://openalex.org/I119003972","display_name":"Roma Tre University","ror":"https://ror.org/05vf0dg29","country_code":"IT","type":"education","lineage":["https://openalex.org/I119003972"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Pietro Corsi","raw_affiliation_strings":["Department of Science, Universit\u00e0 degli Studi \u201cRoma Tre\u201d, via della Vasca Navale 84, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Science, Universit\u00e0 degli Studi \u201cRoma Tre\u201d, via della Vasca Navale 84, Rome, Italy","institution_ids":["https://openalex.org/I119003972"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057595671","display_name":"Rosalba Lepore","orcid":"https://orcid.org/0000-0002-9481-2557"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Rosalba Lepore","raw_affiliation_strings":["Biozentrum, University of Basel, Klingelbergstrasse 50\u201370, CH-4056 Basel, Switzerland","SIB Swiss Institute of Bioinformatics, Biozentrum, University of Basel, Klingelbergstrasse 50\u201370, CH-4056 Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biozentrum, University of Basel, Klingelbergstrasse 50\u201370, CH-4056 Basel, Switzerland","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Biozentrum, University of Basel, Klingelbergstrasse 50\u201370, CH-4056 Basel, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I1850255"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052209378","display_name":"Gian Gaetano Tartaglia","orcid":"https://orcid.org/0000-0001-7524-6310"},"institutions":[{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["ES","IT"],"is_corresponding":true,"raw_author_name":"Gian Gaetano Tartaglia","raw_affiliation_strings":["Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader St. 88, Barcelona, Spain","Department of Biology and Biotechnology, Sapienza University of Rome, Piazzale Aldo Moro 5, Rome, Italy","Institucio\u2019 Catalana de Recerca i Estudis Avancats (ICREA), 23 Passeig Llu\u00ecs Companys, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader St. 88, Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"Department of Biology and Biotechnology, Sapienza University of Rome, Piazzale Aldo Moro 5, Rome, Italy","institution_ids":["https://openalex.org/I861853513"]},{"raw_affiliation_string":"Institucio\u2019 Catalana de Recerca i Estudis Avancats (ICREA), 23 Passeig Llu\u00ecs Companys, Barcelona, Spain","institution_ids":["https://openalex.org/I11932220"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015294553","display_name":"Edoardo Milanetti","orcid":"https://orcid.org/0000-0002-3046-5170"},"institutions":[{"id":"https://openalex.org/I30771326","display_name":"Italian Institute of Technology","ror":"https://ror.org/042t93s57","country_code":"IT","type":"facility","lineage":["https://openalex.org/I30771326"]},{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Edoardo Milanetti","raw_affiliation_strings":["Center for Life Nano Science@Sapienza, Instituto Italiano di Tecnologia, Viale Regina Elena, 291 Roma (RM), Italy","Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Life Nano Science@Sapienza, Instituto Italiano di Tecnologia, Viale Regina Elena, 291 Roma (RM), Italy","institution_ids":["https://openalex.org/I30771326"]},{"raw_affiliation_string":"Department of Physics, Sapienza University, Piazzale Aldo Moro 5, Rome, Italy","institution_ids":["https://openalex.org/I861853513"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5052209378"],"corresponding_institution_ids":["https://openalex.org/I11932220","https://openalex.org/I4210137962","https://openalex.org/I861853513"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.3457,"has_fulltext":true,"cited_by_count":105,"citation_normalized_percentile":{"value":0.89707143,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"35","issue":"15","first_page":"2569","last_page":"2577"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.8777999877929688,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.8777999877929688,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.05770000070333481,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.010400000028312206,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6425305604934692},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5785960555076599},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5470028519630432},{"id":"https://openalex.org/keywords/thermal-stability","display_name":"Thermal stability","score":0.46890178322792053},{"id":"https://openalex.org/keywords/stability","display_name":"Stability (learning theory)","score":0.45701223611831665},{"id":"https://openalex.org/keywords/protein-stability","display_name":"Protein stability","score":0.4202612638473511},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3731568157672882},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.34169384837150574},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2771119773387909},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21510061621665955},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.17373019456863403},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.13278722763061523}],"concepts":[{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6425305604934692},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5785960555076599},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5470028519630432},{"id":"https://openalex.org/C59061564","wikidata":"https://www.wikidata.org/wiki/Q7783071","display_name":"Thermal stability","level":2,"score":0.46890178322792053},{"id":"https://openalex.org/C112972136","wikidata":"https://www.wikidata.org/wiki/Q7595718","display_name":"Stability (learning theory)","level":2,"score":0.45701223611831665},{"id":"https://openalex.org/C2988375501","wikidata":"https://www.wikidata.org/wiki/Q847556","display_name":"Protein stability","level":2,"score":0.4202612638473511},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3731568157672882},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.34169384837150574},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2771119773387909},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21510061621665955},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.17373019456863403},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.13278722763061523},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055550","descriptor_name":"Protein Stability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055550","descriptor_name":"Protein Stability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055550","descriptor_name":"Protein Stability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/bty1011","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty1011","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/15/2569/29012458/bty1011.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30535291","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30535291","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:repositori-api.upf.edu:10230/42543","is_oa":true,"landing_page_url":"http://hdl.handle.net/10230/42543","pdf_url":null,"source":{"id":"https://openalex.org/S4306402615","display_name":"Repositori digital de la UPF (Universitat Pompeu Fabra)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I170486558","host_organization_name":"Universitat Pompeu Fabra","host_organization_lineage":["https://openalex.org/I170486558"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:5625145","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6662296","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:iris.uniroma1.it:11573/1223470","is_oa":true,"landing_page_url":"https://hdl.handle.net/11573/1223470","pdf_url":null,"source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:iris.uniroma1.it:11573/1279567","is_oa":true,"landing_page_url":"http://hdl.handle.net/11573/1279567","pdf_url":null,"source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty1011","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty1011","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/15/2569/29012458/bty1011.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5418912364","display_name":null,"funder_award_id":"BFU2014","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G6870755724","display_name":null,"funder_award_id":"043296","funder_id":"https://openalex.org/F4320338335","funder_display_name":"H2020 European Research Council"}],"funders":[{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320338335","display_name":"H2020 European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2950437427.pdf","grobid_xml":"https://content.openalex.org/works/W2950437427.grobid-xml"},"referenced_works_count":69,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W1496610192","https://openalex.org/W1536428180","https://openalex.org/W1623768750","https://openalex.org/W1891587661","https://openalex.org/W1969620541","https://openalex.org/W1969761972","https://openalex.org/W1992462914","https://openalex.org/W1998235708","https://openalex.org/W1998490996","https://openalex.org/W2001840083","https://openalex.org/W2002418866","https://openalex.org/W2003894319","https://openalex.org/W2005824433","https://openalex.org/W2006927892","https://openalex.org/W2008708467","https://openalex.org/W2016381774","https://openalex.org/W2017736462","https://openalex.org/W2025878809","https://openalex.org/W2026253150","https://openalex.org/W2027304997","https://openalex.org/W2029174024","https://openalex.org/W2031328428","https://openalex.org/W2043960005","https://openalex.org/W2045608551","https://openalex.org/W2048537773","https://openalex.org/W2057246411","https://openalex.org/W2057267661","https://openalex.org/W2060433756","https://openalex.org/W2062332413","https://openalex.org/W2063654429","https://openalex.org/W2067552612","https://openalex.org/W2070184351","https://openalex.org/W2072479690","https://openalex.org/W2072599243","https://openalex.org/W2075789210","https://openalex.org/W2078459473","https://openalex.org/W2083000982","https://openalex.org/W2088893052","https://openalex.org/W2099672241","https://openalex.org/W2101414808","https://openalex.org/W2122570878","https://openalex.org/W2141179031","https://openalex.org/W2149055390","https://openalex.org/W2150981663","https://openalex.org/W2154665416","https://openalex.org/W2155733474","https://openalex.org/W2157024474","https://openalex.org/W2162875257","https://openalex.org/W2163641424","https://openalex.org/W2164243919","https://openalex.org/W2298358682","https://openalex.org/W2313941074","https://openalex.org/W2328425223","https://openalex.org/W2345718491","https://openalex.org/W2519539312","https://openalex.org/W2529452802","https://openalex.org/W2531018082","https://openalex.org/W2565045120","https://openalex.org/W2608356044","https://openalex.org/W2614314148","https://openalex.org/W2648949596","https://openalex.org/W2757959296","https://openalex.org/W3005478791","https://openalex.org/W3026000087","https://openalex.org/W4251849913","https://openalex.org/W4252310231","https://openalex.org/W6608852248","https://openalex.org/W6728145516"],"related_works":["https://openalex.org/W2062195135","https://openalex.org/W2795079307","https://openalex.org/W2793058541","https://openalex.org/W1983629434","https://openalex.org/W2055929693","https://openalex.org/W4324271173","https://openalex.org/W1967645776","https://openalex.org/W2352227742","https://openalex.org/W4387581414","https://openalex.org/W3104156022"],"abstract_inverted_index":{"MOTIVATION:":[0],"Understanding":[1],"the":[2,16,34,48,67,92,98,124],"molecular":[3],"mechanisms":[4],"of":[5,33,41,50,88,94,119,129],"thermal":[6,63],"stability":[7,64],"is":[8,135],"a":[9,38,57,71,104],"challenge":[10],"in":[11],"protein":[12],"biology.":[13],"Indeed,":[14],"knowing":[15],"temperature":[17],"at":[18,147],"which":[19,27],"proteins":[20,79,115],"are":[21,28,145],"stable":[22],"has":[23],"important":[24],"theoretical":[25],"implications,":[26],"intimately":[29],"linked":[30],"with":[31,116],"properties":[32],"native":[35,100],"fold,":[36],"and":[37,83,113,121],"wide":[39],"range":[40],"potential":[42],"applications":[43],"from":[44],"drug":[45],"design":[46],"to":[47,61,110,139],"optimization":[49],"enzyme":[51],"activity.":[52],"RESULTS:":[53],"Here,":[54],"we":[55,77,102],"present":[56],"novel":[58],"graph-theoretical":[59],"framework":[60],"assess":[62],"based":[65],"on":[66],"structure":[68],"without":[69],"any":[70],"priori":[72],"information.":[73],"In":[74],"this":[75],"approach":[76],"describe":[78],"as":[80],"energy-weighted":[81],"graphs":[82],"compare":[84],"them":[85],"using":[86],"ensembles":[87],"interaction":[89],"networks.":[90],"Investigating":[91],"position":[93],"specific":[95],"interactions":[96],"within":[97],"3D":[99],"structure,":[101],"developed":[103],"parameter-free":[105],"network":[106],"descriptor":[107],"that":[108],"permits":[109],"distinguish":[111],"thermostable":[112],"mesostable":[114],"an":[117],"accuracy":[118],"76%":[120],"area":[122],"under":[123],"receiver":[125],"operating":[126],"characteristic":[127],"curve":[128],"78%.":[130],"AVAILABILITY":[131],"AND":[132],"IMPLEMENTATION:":[133],"Code":[134],"available":[136,146],"upon":[137],"request":[138],"edoardo.milanetti@uniroma1.it.":[140],"SUPPLEMENTARY":[141],"INFORMATION:":[142],"Supplementary":[143],"data":[144],"Bioinformatics":[148],"online.":[149]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":24},{"year":2023,"cited_by_count":21},{"year":2022,"cited_by_count":20},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
