{"id":"https://openalex.org/W2794026812","doi":"https://doi.org/10.1093/bioinformatics/bty040","title":"TOXsIgN: a cross-species repository for toxicogenomic signatures","display_name":"TOXsIgN: a cross-species repository for toxicogenomic signatures","publication_year":2018,"publication_date":"2018-01-26","ids":{"openalex":"https://openalex.org/W2794026812","doi":"https://doi.org/10.1093/bioinformatics/bty040","mag":"2794026812"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty040","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty040","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/12/2116/25047720/bty040.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/12/2116/25047720/bty040.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024615654","display_name":"Thomas Darde","orcid":"https://orcid.org/0000-0003-0808-9786"},"institutions":[{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Thomas A Darde","raw_affiliation_strings":["Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires (IRISA/INRIA) \u2013 GenOuest Platform, Universit\u00e9 de Rennes 1, F-35042 Rennes, France","Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires (IRISA/INRIA) \u2013 GenOuest Platform, Universit\u00e9 de Rennes 1, F-35042 Rennes, France","institution_ids":["https://openalex.org/I2802519937","https://openalex.org/I56067802","https://openalex.org/I1326498283"]},{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057983454","display_name":"Pierre Gaudriault","orcid":"https://orcid.org/0000-0001-9791-9563"},"institutions":[{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Gaudriault","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052944172","display_name":"R\u00e9mi B\u00e9ranger","orcid":"https://orcid.org/0000-0002-6608-8020"},"institutions":[{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"R\u00e9mi Beranger","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039293363","display_name":"Cl\u00e9ment Lancien","orcid":null},"institutions":[{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Cl\u00e9ment Lancien","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035887336","display_name":"Anna\u00eblle Caillarec-Joly","orcid":null},"institutions":[{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Anna\u00eblle Caillarec-Joly","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083778633","display_name":"Olivier Sallou","orcid":"https://orcid.org/0000-0003-3561-5657"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier Sallou","raw_affiliation_strings":["Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires (IRISA/INRIA) \u2013 GenOuest Platform, Universit\u00e9 de Rennes 1, F-35042 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires (IRISA/INRIA) \u2013 GenOuest Platform, Universit\u00e9 de Rennes 1, F-35042 Rennes, France","institution_ids":["https://openalex.org/I2802519937","https://openalex.org/I56067802","https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080967219","display_name":"Nathalie Bonvallot","orcid":"https://orcid.org/0000-0002-8070-6008"},"institutions":[{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Nathalie Bonvallot","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015709540","display_name":"C\u00e9cile Chevrier","orcid":"https://orcid.org/0000-0003-3101-8222"},"institutions":[{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"C\u00e9cile Chevrier","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066403075","display_name":"S\u00e9verine Mazaud\u2010Guittot","orcid":"https://orcid.org/0000-0003-0566-4124"},"institutions":[{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"S\u00e9verine Mazaud-Guittot","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053877774","display_name":"Bernard J\u00e9gou","orcid":"https://orcid.org/0000-0003-0623-3609"},"institutions":[{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Bernard J\u00e9gou","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064301488","display_name":"Olivier Collin","orcid":"https://orcid.org/0000-0002-8959-8402"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier Collin","raw_affiliation_strings":["Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires (IRISA/INRIA) \u2013 GenOuest Platform, Universit\u00e9 de Rennes 1, F-35042 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires (IRISA/INRIA) \u2013 GenOuest Platform, Universit\u00e9 de Rennes 1, F-35042 Rennes, France","institution_ids":["https://openalex.org/I2802519937","https://openalex.org/I56067802","https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008418938","display_name":"E. Becker","orcid":"https://orcid.org/0000-0002-7673-0582"},"institutions":[{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Emmanuelle Becker","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042246697","display_name":"Antoine D. Rolland","orcid":"https://orcid.org/0000-0002-9758-4406"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Antoine D Rolland","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015996736","display_name":"Fr\u00e9d\u00e9ric Chalmel","orcid":"https://orcid.org/0000-0002-0535-3628"},"institutions":[{"id":"https://openalex.org/I4210108239","display_name":"Institut de Recherche en Sant\u00e9, Environnement et Travail","ror":"https://ror.org/01p178v10","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I49451733","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I165283593","display_name":"\u00c9cole des Hautes \u00c9tudes en Sant\u00e9 Publique","ror":"https://ror.org/01sc83v92","country_code":"FR","type":"education","lineage":["https://openalex.org/I165283593"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Fr\u00e9d\u00e9ric Chalmel","raw_affiliation_strings":["Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France"],"affiliations":[{"raw_affiliation_string":"Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en sant\u00e9, environnement et travail) - UMR_S1085, F-35000 Rennes, France","institution_ids":["https://openalex.org/I4210108239","https://openalex.org/I165283593","https://openalex.org/I154526488","https://openalex.org/I56067802"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5015996736"],"corresponding_institution_ids":["https://openalex.org/I154526488","https://openalex.org/I165283593","https://openalex.org/I4210108239","https://openalex.org/I56067802"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.1031,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.76786508,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"34","issue":"12","first_page":"2116","last_page":"2122"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7121362090110779},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.7039777040481567},{"id":"https://openalex.org/keywords/javascript","display_name":"JavaScript","score":0.5690515637397766},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5088574886322021},{"id":"https://openalex.org/keywords/information-repository","display_name":"Information repository","score":0.4378800690174103},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3587770462036133},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.34080201387405396},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3346261978149414},{"id":"https://openalex.org/keywords/computer-data-storage","display_name":"Computer data storage","score":0.14911025762557983},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.08559590578079224}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7121362090110779},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.7039777040481567},{"id":"https://openalex.org/C544833334","wikidata":"https://www.wikidata.org/wiki/Q2005","display_name":"JavaScript","level":2,"score":0.5690515637397766},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5088574886322021},{"id":"https://openalex.org/C3102742","wikidata":"https://www.wikidata.org/wiki/Q6031177","display_name":"Information repository","level":3,"score":0.4378800690174103},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3587770462036133},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.34080201387405396},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3346261978149414},{"id":"https://openalex.org/C194739806","wikidata":"https://www.wikidata.org/wiki/Q66221","display_name":"Computer data storage","level":2,"score":0.14911025762557983},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.08559590578079224}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bty040","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty040","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/12/2116/25047720/bty040.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:HAL:hal-01863047v1","is_oa":false,"landing_page_url":"https://univ-rennes.hal.science/hal-01863047","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://academic.oup.com/bioinformatics/article/34/12/2116/4827679","raw_type":"Journal articles"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty040","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty040","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/12/2116/25047720/bty040.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1868381787","display_name":null,"funder_award_id":"FRM n\u00b0DBI20131228558","funder_id":"https://openalex.org/F4320321589","funder_display_name":"Fondation pour la Recherche M\u00e9dicale"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321589","display_name":"Fondation pour la Recherche M\u00e9dicale","ror":"https://ror.org/04w6kn183"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2794026812.pdf","grobid_xml":"https://content.openalex.org/works/W2794026812.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W8265736","https://openalex.org/W136087945","https://openalex.org/W1149694606","https://openalex.org/W1964904043","https://openalex.org/W1966821478","https://openalex.org/W1979978607","https://openalex.org/W1986794061","https://openalex.org/W1987777080","https://openalex.org/W1992442866","https://openalex.org/W2032393099","https://openalex.org/W2048060485","https://openalex.org/W2048333079","https://openalex.org/W2067786443","https://openalex.org/W2073217671","https://openalex.org/W2094147349","https://openalex.org/W2094457503","https://openalex.org/W2096237167","https://openalex.org/W2098116405","https://openalex.org/W2099536383","https://openalex.org/W2103017472","https://openalex.org/W2106731207","https://openalex.org/W2107580398","https://openalex.org/W2113142309","https://openalex.org/W2118258530","https://openalex.org/W2121604817","https://openalex.org/W2123329045","https://openalex.org/W2123454534","https://openalex.org/W2126130217","https://openalex.org/W2130815948","https://openalex.org/W2135827569","https://openalex.org/W2167900797","https://openalex.org/W2175278559","https://openalex.org/W2302501749","https://openalex.org/W2323726454","https://openalex.org/W2335869819","https://openalex.org/W2473190403","https://openalex.org/W2489003193","https://openalex.org/W2545880513","https://openalex.org/W2557385283","https://openalex.org/W2558649973","https://openalex.org/W2773787581","https://openalex.org/W4234797890"],"related_works":["https://openalex.org/W2341492732","https://openalex.org/W3187193180","https://openalex.org/W106542691","https://openalex.org/W2461078469","https://openalex.org/W1699080303","https://openalex.org/W4297799326","https://openalex.org/W3116064965","https://openalex.org/W123790205","https://openalex.org/W2085515337","https://openalex.org/W4287027380"],"abstract_inverted_index":{"Abstract":[0],"Motivation":[1],"At":[2],"the":[3,16,24,28,52,87],"same":[4],"time":[5],"that":[6,76,95,125],"toxicologists":[7],"express":[8],"increasing":[9,53],"concern":[10],"about":[11],"reproducibility":[12],"in":[13,48,145],"this":[14,58],"field,":[15],"development":[17],"of":[18,32,83],"dedicated":[19],"databases":[20],"has":[21],"already":[22],"smoothed":[23],"path":[25],"toward":[26],"improving":[27],"storage":[29,80],"and":[30,42,81,102,133,148],"exchange":[31],"raw":[33],"toxicogenomic":[34,84],"data.":[35],"Nevertheless,":[36],"none":[37],"provides":[38,72,109],"access":[39,56],"to":[40,57],"analyzed":[41],"interpreted":[43],"data":[44,158],"as":[45,120,122],"originally":[46],"reported":[47],"scientific":[49,88],"publications.":[50],"Given":[51],"demand":[54],"for":[55,65],"information,":[59],"we":[60],"developed":[61],"TOXsIgN,":[62],"a":[63,73,112,116],"repository":[64,71,137],"TOXicogenomic":[66],"sIgNatures.":[67],"Results":[68],"The":[69,135],"TOXsIgN":[70,136],"flexible":[74],"environment":[75,114],"facilitates":[77],"online":[78],"submission,":[79],"retrieval":[82],"signatures":[85],"by":[86],"community.":[89],"It":[90,107],"currently":[91],"hosts":[92],"754":[93],"projects":[94],"describe":[96],"more":[97],"than":[98],"450":[99],"distinct":[100],"chemicals":[101],"their":[103],"8491":[104],"associated":[105],"signatures.":[106],"also":[108],"users":[110],"with":[111,150],"working":[113],"containing":[115],"powerful":[117],"search":[118],"engine":[119],"well":[121],"bioinformatics/biostatistics":[123],"modules":[124],"enable":[126],"signature":[127],"comparisons":[128],"or":[129],"enrichment":[130],"analyses.":[131],"Availability":[132],"implementation":[134],"is":[138],"freely":[139],"accessible":[140],"at":[141,161],"http://toxsign.genouest.org.":[142],"Website":[143],"implemented":[144],"Python,":[146],"JavaScript":[147],"MongoDB,":[149],"all":[151],"major":[152],"browsers":[153],"supported.":[154],"Supplementary":[155,157],"information":[156],"are":[159],"available":[160],"Bioinformatics":[162],"online.":[163]},"counts_by_year":[{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2018-03-29T00:00:00"}
