{"id":"https://openalex.org/W2757570408","doi":"https://doi.org/10.1093/bioinformatics/btx599","title":"HoTResDB: host transcriptional response database for viral hemorrhagic fevers","display_name":"HoTResDB: host transcriptional response database for viral hemorrhagic fevers","publication_year":2017,"publication_date":"2017-09-19","ids":{"openalex":"https://openalex.org/W2757570408","doi":"https://doi.org/10.1093/bioinformatics/btx599","mag":"2757570408","pmid":"https://pubmed.ncbi.nlm.nih.gov/29028885"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx599","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx599","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/2/321/25114344/btx599.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/2/321/25114344/btx599.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031605277","display_name":"Jonathan W. Lo","orcid":"https://orcid.org/0000-0002-2514-9333"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan Lo","raw_affiliation_strings":["Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032606261","display_name":"Deric Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Deric Zhang","raw_affiliation_strings":["Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034418318","display_name":"Emily Speranza","orcid":"https://orcid.org/0000-0003-0666-4804"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emily Speranza","raw_affiliation_strings":["Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA","Department of Microbiology, National Emerging Infectious Diseases Laboratories (NEIDL), Boston Univeristy, 620 Albany St, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"Department of Microbiology, National Emerging Infectious Diseases Laboratories (NEIDL), Boston Univeristy, 620 Albany St, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036307113","display_name":"Jose A. Negron","orcid":"https://orcid.org/0000-0003-3454-0104"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jose A Negron","raw_affiliation_strings":["Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013526416","display_name":"John H. Connor","orcid":"https://orcid.org/0000-0002-8867-7256"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"John H Connor","raw_affiliation_strings":["Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA","Department of Microbiology, National Emerging Infectious Diseases Laboratories (NEIDL), Boston Univeristy, 620 Albany St, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"Department of Microbiology, National Emerging Infectious Diseases Laboratories (NEIDL), Boston Univeristy, 620 Albany St, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5013526416"],"corresponding_institution_ids":["https://openalex.org/I111088046"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.1619,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.52640439,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"34","issue":"2","first_page":"321","last_page":"322"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11581","display_name":"Viral Infections and Outbreaks Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11581","display_name":"Viral Infections and Outbreaks Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10340","display_name":"Hepatitis B Virus Studies","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10976","display_name":"Viral gastroenteritis research and epidemiology","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.7345269918441772},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.5234969258308411},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4925718903541565},{"id":"https://openalex.org/keywords/microarray","display_name":"Microarray","score":0.49033355712890625},{"id":"https://openalex.org/keywords/host-response","display_name":"Host response","score":0.4801028072834015},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.46270325779914856},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3488602042198181},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.3297356367111206},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2433590590953827},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.23312193155288696},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19645392894744873},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.18251129984855652},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.07056841254234314}],"concepts":[{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.7345269918441772},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.5234969258308411},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4925718903541565},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.49033355712890625},{"id":"https://openalex.org/C2994443828","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Host response","level":3,"score":0.4801028072834015},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.46270325779914856},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3488602042198181},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.3297356367111206},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2433590590953827},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.23312193155288696},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19645392894744873},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.18251129984855652},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.07056841254234314}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btx599","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx599","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/2/321/25114344/btx599.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29028885","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29028885","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5860212","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5860212","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx599","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx599","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/2/321/25114344/btx599.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3054848719","display_name":null,"funder_award_id":"R21-AI1","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G502683639","display_name":null,"funder_award_id":"AI1096159","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G5312562340","display_name":null,"funder_award_id":"R01-AI1096159","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G5718272591","display_name":null,"funder_award_id":"R21-AI121933","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G5903061775","display_name":null,"funder_award_id":"NIAID","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6894402473","display_name":null,"funder_award_id":"Fellowship","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2757570408.pdf","grobid_xml":"https://content.openalex.org/works/W2757570408.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W1987222249","https://openalex.org/W2114104545","https://openalex.org/W2134043700","https://openalex.org/W2146512944","https://openalex.org/W2511907102","https://openalex.org/W6647398078"],"related_works":["https://openalex.org/W2796636403","https://openalex.org/W2015700328","https://openalex.org/W2364565895","https://openalex.org/W2767847608","https://openalex.org/W4246282885","https://openalex.org/W2911678823","https://openalex.org/W2152648570","https://openalex.org/W2037892364","https://openalex.org/W2319154570","https://openalex.org/W3152114242"],"abstract_inverted_index":{"HoTResDB":[0],"is":[1],"freely":[2],"available":[3],"at":[4],"http://hotresdb.bu.edu.":[5]},"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
