{"id":"https://openalex.org/W2511835277","doi":"https://doi.org/10.1093/bioinformatics/btw560","title":"Imbalanced multi-label learning for identifying antimicrobial peptides and their functional types","display_name":"Imbalanced multi-label learning for identifying antimicrobial peptides and their functional types","publication_year":2016,"publication_date":"2016-08-26","ids":{"openalex":"https://openalex.org/W2511835277","doi":"https://doi.org/10.1093/bioinformatics/btw560","mag":"2511835277","pmid":"https://pubmed.ncbi.nlm.nih.gov/27565585"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw560","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw560","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/24/3745/13622392/btw560.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/24/3745/13622392/btw560.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109225892","display_name":"Wei\u2010Zhong Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]},{"id":"https://openalex.org/I105991555","display_name":"Jingdezhen Ceramic Institute","ror":"https://ror.org/01d0jcz74","country_code":"CN","type":"education","lineage":["https://openalex.org/I105991555"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Weizhong Lin","raw_affiliation_strings":["1nformation Engineering School, Jingdezhen Ceramic Institute, Jingdezhen 333406, China","2Department of Computer Science and Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA"],"affiliations":[{"raw_affiliation_string":"1nformation Engineering School, Jingdezhen Ceramic Institute, Jingdezhen 333406, China","institution_ids":["https://openalex.org/I105991555"]},{"raw_affiliation_string":"2Department of Computer Science and Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082428303","display_name":"Dong Xu","orcid":"https://orcid.org/0000-0002-4809-0514"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Dong Xu","raw_affiliation_strings":["2Department of Computer Science and Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA"],"affiliations":[{"raw_affiliation_string":"2Department of Computer Science and Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5082428303"],"corresponding_institution_ids":["https://openalex.org/I76835614"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":4.0032,"has_fulltext":false,"cited_by_count":112,"citation_normalized_percentile":{"value":0.94063007,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"32","issue":"24","first_page":"3745","last_page":"3752"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11550","display_name":"Text and Document Classification Technologies","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/antimicrobial-peptides","display_name":"Antimicrobial peptides","score":0.7953766584396362},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6386356353759766},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.6385786533355713},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6295786499977112},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.6052097082138062},{"id":"https://openalex.org/keywords/immune-recognition","display_name":"Immune recognition","score":0.5611441135406494},{"id":"https://openalex.org/keywords/hamming-distance","display_name":"Hamming distance","score":0.4998438358306885},{"id":"https://openalex.org/keywords/multi-label-classification","display_name":"Multi-label classification","score":0.48377344012260437},{"id":"https://openalex.org/keywords/innate-immune-system","display_name":"Innate immune system","score":0.4128727316856384},{"id":"https://openalex.org/keywords/antimicrobial","display_name":"Antimicrobial","score":0.3689555525779724},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3483123779296875},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2939201891422272},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.252375066280365},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.17983880639076233},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.12213131785392761}],"concepts":[{"id":"https://openalex.org/C540938839","wikidata":"https://www.wikidata.org/wiki/Q1201508","display_name":"Antimicrobial peptides","level":3,"score":0.7953766584396362},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6386356353759766},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.6385786533355713},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6295786499977112},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.6052097082138062},{"id":"https://openalex.org/C3018252375","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune recognition","level":3,"score":0.5611441135406494},{"id":"https://openalex.org/C193319292","wikidata":"https://www.wikidata.org/wiki/Q272172","display_name":"Hamming distance","level":2,"score":0.4998438358306885},{"id":"https://openalex.org/C2776482837","wikidata":"https://www.wikidata.org/wiki/Q3553958","display_name":"Multi-label classification","level":2,"score":0.48377344012260437},{"id":"https://openalex.org/C136449434","wikidata":"https://www.wikidata.org/wiki/Q428253","display_name":"Innate immune system","level":3,"score":0.4128727316856384},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.3689555525779724},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3483123779296875},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2939201891422272},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.252375066280365},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.17983880639076233},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.12213131785392761},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023181","descriptor_name":"Antimicrobial Cationic Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D023181","descriptor_name":"Antimicrobial Cationic Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D023181","descriptor_name":"Antimicrobial Cationic Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btw560","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw560","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/24/3745/13622392/btw560.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27565585","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27565585","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/24/3745","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/24/3745","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:5167070","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5167070","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw560","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw560","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/24/3745/13622392/btw560.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1267135791","display_name":null,"funder_award_id":"61462047, 31560316","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7213916153","display_name":null,"funder_award_id":"GM100701","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2511835277.pdf","grobid_xml":"https://content.openalex.org/works/W2511835277.grobid-xml"},"referenced_works_count":92,"referenced_works":["https://openalex.org/W175634338","https://openalex.org/W1496056137","https://openalex.org/W1524416683","https://openalex.org/W1563938718","https://openalex.org/W1577818368","https://openalex.org/W1807324513","https://openalex.org/W1964467472","https://openalex.org/W1970696760","https://openalex.org/W1971057981","https://openalex.org/W1977241485","https://openalex.org/W1978444624","https://openalex.org/W1981091069","https://openalex.org/W1982289655","https://openalex.org/W1985718285","https://openalex.org/W1991476392","https://openalex.org/W1998064689","https://openalex.org/W1999954155","https://openalex.org/W2001004762","https://openalex.org/W2002830978","https://openalex.org/W2009758767","https://openalex.org/W2010211703","https://openalex.org/W2010979687","https://openalex.org/W2015490529","https://openalex.org/W2022657456","https://openalex.org/W2027731040","https://openalex.org/W2029119755","https://openalex.org/W2031321072","https://openalex.org/W2034070267","https://openalex.org/W2035055162","https://openalex.org/W2035755292","https://openalex.org/W2036087614","https://openalex.org/W2037223753","https://openalex.org/W2038759777","https://openalex.org/W2039175997","https://openalex.org/W2047187013","https://openalex.org/W2049864610","https://openalex.org/W2052684427","https://openalex.org/W2053463056","https://openalex.org/W2065806863","https://openalex.org/W2069389043","https://openalex.org/W2074888575","https://openalex.org/W2076860935","https://openalex.org/W2080915318","https://openalex.org/W2081697244","https://openalex.org/W2083416546","https://openalex.org/W2087548537","https://openalex.org/W2091520430","https://openalex.org/W2094244309","https://openalex.org/W2104087716","https://openalex.org/W2112862199","https://openalex.org/W2118729365","https://openalex.org/W2120026469","https://openalex.org/W2124266758","https://openalex.org/W2128495797","https://openalex.org/W2129115651","https://openalex.org/W2131361833","https://openalex.org/W2132292391","https://openalex.org/W2133223948","https://openalex.org/W2133990480","https://openalex.org/W2135107501","https://openalex.org/W2137107481","https://openalex.org/W2145957695","https://openalex.org/W2146241755","https://openalex.org/W2146543014","https://openalex.org/W2148143831","https://openalex.org/W2153099927","https://openalex.org/W2157599860","https://openalex.org/W2159148537","https://openalex.org/W2161621183","https://openalex.org/W2168025622","https://openalex.org/W2205505631","https://openalex.org/W2209329607","https://openalex.org/W2270702445","https://openalex.org/W2278741011","https://openalex.org/W2313411748","https://openalex.org/W2321308395","https://openalex.org/W2321499681","https://openalex.org/W2340970647","https://openalex.org/W2344859163","https://openalex.org/W2345938495","https://openalex.org/W2387572940","https://openalex.org/W2388497630","https://openalex.org/W2911964244","https://openalex.org/W3008214279","https://openalex.org/W4210968711","https://openalex.org/W4291817994","https://openalex.org/W6634609459","https://openalex.org/W6650610306","https://openalex.org/W6680470464","https://openalex.org/W6680483772","https://openalex.org/W6700377828","https://openalex.org/W6710540090"],"related_works":["https://openalex.org/W2066136773","https://openalex.org/W2565121077","https://openalex.org/W1495541589","https://openalex.org/W2883687614","https://openalex.org/W4385723643","https://openalex.org/W2314450753","https://openalex.org/W1987802636","https://openalex.org/W2117626607","https://openalex.org/W1785988267","https://openalex.org/W2805174638"],"abstract_inverted_index":{"A":[0],"user-friendly":[1],"web-server":[2],"for":[3],"MLAMP":[4],"was":[5],"established":[6],"at":[7],"http://www.jci-bioinfo.cn/MLAMP":[8],"CONTACTS:":[9],"linweizhong@jci.edu.cn":[10],"or":[11],"xudong@missouri.edu.":[12]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":19},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":21},{"year":2021,"cited_by_count":15},{"year":2020,"cited_by_count":14},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":6}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
