{"id":"https://openalex.org/W2949524341","doi":"https://doi.org/10.1093/bioinformatics/btw050","title":"Efficient privacy-preserving string search and an application in genomics","display_name":"Efficient privacy-preserving string search and an application in genomics","publication_year":2016,"publication_date":"2016-03-02","ids":{"openalex":"https://openalex.org/W2949524341","doi":"https://doi.org/10.1093/bioinformatics/btw050","mag":"2949524341","pmid":"https://pubmed.ncbi.nlm.nih.gov/27153731"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw050","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw050","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/11/1652/22693274/btw050.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/11/1652/22693274/btw050.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043657069","display_name":"Kana Shimizu","orcid":"https://orcid.org/0000-0001-6452-9091"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I73613424","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54","country_code":"JP","type":"government","lineage":["https://openalex.org/I73613424"]}],"countries":["JP","US"],"is_corresponding":true,"raw_author_name":"Kana Shimizu","raw_affiliation_strings":["1Biotechnology Research Institute for Drug Discovery, National Institute of Advanced Industrial Science and Technology, Tokyo 135-0064, Japan,","2Computational Biology, Memorial Sloan Kettering Cancer Center, New York, NY 1275 York, USA,"],"affiliations":[{"raw_affiliation_string":"1Biotechnology Research Institute for Drug Discovery, National Institute of Advanced Industrial Science and Technology, Tokyo 135-0064, Japan,","institution_ids":["https://openalex.org/I73613424"]},{"raw_affiliation_string":"2Computational Biology, Memorial Sloan Kettering Cancer Center, New York, NY 1275 York, USA,","institution_ids":["https://openalex.org/I1334819555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002435737","display_name":"Koji Nuida","orcid":"https://orcid.org/0000-0001-8259-9958"},"institutions":[{"id":"https://openalex.org/I4210086780","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210086780"]},{"id":"https://openalex.org/I73613424","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54","country_code":"JP","type":"government","lineage":["https://openalex.org/I73613424"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Koji Nuida","raw_affiliation_strings":["3Information Technology Research Institute, National Institute of Advanced Industrial Science and Technology, Tokyo 135-0064, Japan and","4Japan Science and Technology Agency (JST) PRESTO Researcher, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"3Information Technology Research Institute, National Institute of Advanced Industrial Science and Technology, Tokyo 135-0064, Japan and","institution_ids":["https://openalex.org/I73613424"]},{"raw_affiliation_string":"4Japan Science and Technology Agency (JST) PRESTO Researcher, Tokyo, Japan","institution_ids":["https://openalex.org/I4210086780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035416263","display_name":"Gunnar R\u00e4tsch","orcid":"https://orcid.org/0000-0001-5486-8532"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Gunnar R\u00e4tsch","raw_affiliation_strings":["2Computational Biology, Memorial Sloan Kettering Cancer Center, New York, NY 1275 York, USA,"],"affiliations":[{"raw_affiliation_string":"2Computational Biology, Memorial Sloan Kettering Cancer Center, New York, NY 1275 York, USA,","institution_ids":["https://openalex.org/I1334819555"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5035416263","https://openalex.org/A5043657069"],"corresponding_institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I73613424"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":12.4154,"has_fulltext":false,"cited_by_count":67,"citation_normalized_percentile":{"value":0.9859685,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"32","issue":"11","first_page":"1652","last_page":"1661"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/homomorphic-encryption","display_name":"Homomorphic encryption","score":0.86322021484375},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8048949241638184},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.6374233961105347},{"id":"https://openalex.org/keywords/encryption","display_name":"Encryption","score":0.6152278184890747},{"id":"https://openalex.org/keywords/cryptography","display_name":"Cryptography","score":0.4440051019191742},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.43130066990852356},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4292919635772705},{"id":"https://openalex.org/keywords/oblivious-transfer","display_name":"Oblivious transfer","score":0.4190221428871155},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41113072633743286},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.363203227519989},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3344990015029907},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.17964547872543335},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.13127809762954712},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09478524327278137},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09205994009971619},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09172269701957703}],"concepts":[{"id":"https://openalex.org/C158338273","wikidata":"https://www.wikidata.org/wiki/Q2154943","display_name":"Homomorphic encryption","level":3,"score":0.86322021484375},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8048949241638184},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.6374233961105347},{"id":"https://openalex.org/C148730421","wikidata":"https://www.wikidata.org/wiki/Q141090","display_name":"Encryption","level":2,"score":0.6152278184890747},{"id":"https://openalex.org/C178489894","wikidata":"https://www.wikidata.org/wiki/Q8789","display_name":"Cryptography","level":2,"score":0.4440051019191742},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.43130066990852356},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4292919635772705},{"id":"https://openalex.org/C53076038","wikidata":"https://www.wikidata.org/wiki/Q2915383","display_name":"Oblivious transfer","level":3,"score":0.4190221428871155},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41113072633743286},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.363203227519989},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3344990015029907},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.17964547872543335},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.13127809762954712},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09478524327278137},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09205994009971619},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09172269701957703},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btw050","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw050","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/11/1652/22693274/btw050.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27153731","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27153731","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:3863269","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4892414","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/11/1652","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/11/1652","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw050","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw050","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/11/1652/22693274/btw050.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320309468","display_name":"Memorial Sloan-Kettering Cancer Center","ror":"https://ror.org/02yrq0923"},{"id":"https://openalex.org/F4320311508","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2949524341.pdf","grobid_xml":"https://content.openalex.org/works/W2949524341.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W88105200","https://openalex.org/W127947978","https://openalex.org/W1511913323","https://openalex.org/W1558374100","https://openalex.org/W1562767160","https://openalex.org/W1582659671","https://openalex.org/W1729744401","https://openalex.org/W1838635991","https://openalex.org/W1889757464","https://openalex.org/W1980132682","https://openalex.org/W2047984110","https://openalex.org/W2048547735","https://openalex.org/W2055043387","https://openalex.org/W2074329597","https://openalex.org/W2087135382","https://openalex.org/W2093931624","https://openalex.org/W2096791516","https://openalex.org/W2097341408","https://openalex.org/W2103441770","https://openalex.org/W2105420280","https://openalex.org/W2108834246","https://openalex.org/W2114021497","https://openalex.org/W2119422255","https://openalex.org/W2124985265","https://openalex.org/W2127458553","https://openalex.org/W2132172731","https://openalex.org/W2136145671","https://openalex.org/W2147477044","https://openalex.org/W2166971704","https://openalex.org/W3121158821","https://openalex.org/W4210300416","https://openalex.org/W4235007327","https://openalex.org/W4293196852","https://openalex.org/W6678707656","https://openalex.org/W6842402754"],"related_works":["https://openalex.org/W2539930818","https://openalex.org/W2950359121","https://openalex.org/W4390664647","https://openalex.org/W3012147850","https://openalex.org/W2887779253","https://openalex.org/W2020316223","https://openalex.org/W2152299064","https://openalex.org/W2951391113","https://openalex.org/W2042675353","https://openalex.org/W103476166"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":4}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
