{"id":"https://openalex.org/W2127594626","doi":"https://doi.org/10.1093/bioinformatics/btu264","title":"An efficient parallel algorithm for accelerating computational protein design","display_name":"An efficient parallel algorithm for accelerating computational protein design","publication_year":2014,"publication_date":"2014-06-11","ids":{"openalex":"https://openalex.org/W2127594626","doi":"https://doi.org/10.1093/bioinformatics/btu264","mag":"2127594626","pmid":"https://pubmed.ncbi.nlm.nih.gov/24931991"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu264","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu264","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/12/i255/48923818/bioinformatics_30_12_i255.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/12/i255/48923818/bioinformatics_30_12_i255.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101780758","display_name":"Yichao Zhou","orcid":"https://orcid.org/0000-0003-3067-7963"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]},{"id":"https://openalex.org/I4210153043","display_name":"Duke University Hospital","ror":"https://ror.org/04bct7p84","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876","https://openalex.org/I4210144876","https://openalex.org/I4210153043"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Yichao Zhou","raw_affiliation_strings":["1 Institute for Theoretical Computer Science (ITCS), Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, P. R. China, 2Department of Computer Science, Duke University, Durham, NC 27708, USA and 3Department of Biochemistry, Duke University Medical Center, Durham, NC 27708, USA"],"affiliations":[{"raw_affiliation_string":"1 Institute for Theoretical Computer Science (ITCS), Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, P. R. China, 2Department of Computer Science, Duke University, Durham, NC 27708, USA and 3Department of Biochemistry, Duke University Medical Center, Durham, NC 27708, USA","institution_ids":["https://openalex.org/I99065089","https://openalex.org/I4210153043","https://openalex.org/I4210126298"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101650863","display_name":"Wei Xu","orcid":"https://orcid.org/0000-0001-8856-8677"},"institutions":[{"id":"https://openalex.org/I4210153043","display_name":"Duke University Hospital","ror":"https://ror.org/04bct7p84","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876","https://openalex.org/I4210144876","https://openalex.org/I4210153043"]},{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Wei Xu","raw_affiliation_strings":["1 Institute for Theoretical Computer Science (ITCS), Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, P. R. China, 2Department of Computer Science, Duke University, Durham, NC 27708, USA and 3Department of Biochemistry, Duke University Medical Center, Durham, NC 27708, USA"],"affiliations":[{"raw_affiliation_string":"1 Institute for Theoretical Computer Science (ITCS), Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, P. R. China, 2Department of Computer Science, Duke University, Durham, NC 27708, USA and 3Department of Biochemistry, Duke University Medical Center, Durham, NC 27708, USA","institution_ids":["https://openalex.org/I99065089","https://openalex.org/I4210153043","https://openalex.org/I4210126298"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046723017","display_name":"Bruce R. Donald","orcid":"https://orcid.org/0000-0001-6884-4398"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]},{"id":"https://openalex.org/I4210153043","display_name":"Duke University Hospital","ror":"https://ror.org/04bct7p84","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876","https://openalex.org/I4210144876","https://openalex.org/I4210153043"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Bruce R. Donald","raw_affiliation_strings":["1 Institute for Theoretical Computer Science (ITCS), Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, P. R. China, 2Department of Computer Science, Duke University, Durham, NC 27708, USA and 3Department of Biochemistry, Duke University Medical Center, Durham, NC 27708, USA"],"affiliations":[{"raw_affiliation_string":"1 Institute for Theoretical Computer Science (ITCS), Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, P. R. China, 2Department of Computer Science, Duke University, Durham, NC 27708, USA and 3Department of Biochemistry, Duke University Medical Center, Durham, NC 27708, USA","institution_ids":["https://openalex.org/I99065089","https://openalex.org/I4210153043","https://openalex.org/I4210126298"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009826239","display_name":"Jianyang Zeng","orcid":"https://orcid.org/0000-0003-0950-7716"},"institutions":[{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]},{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]},{"id":"https://openalex.org/I4210153043","display_name":"Duke University Hospital","ror":"https://ror.org/04bct7p84","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876","https://openalex.org/I4210144876","https://openalex.org/I4210153043"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Jianyang Zeng","raw_affiliation_strings":["1 Institute for Theoretical Computer Science (ITCS), Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, P. R. China, 2Department of Computer Science, Duke University, Durham, NC 27708, USA and 3Department of Biochemistry, Duke University Medical Center, Durham, NC 27708, USA"],"affiliations":[{"raw_affiliation_string":"1 Institute for Theoretical Computer Science (ITCS), Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, P. R. China, 2Department of Computer Science, Duke University, Durham, NC 27708, USA and 3Department of Biochemistry, Duke University Medical Center, Durham, NC 27708, USA","institution_ids":["https://openalex.org/I99065089","https://openalex.org/I4210153043","https://openalex.org/I4210126298"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5101780758"],"corresponding_institution_ids":["https://openalex.org/I4210126298","https://openalex.org/I4210153043","https://openalex.org/I99065089"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.7114,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.84353067,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"30","issue":"12","first_page":"i255","last_page":"i263"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8401802182197571},{"id":"https://openalex.org/keywords/speedup","display_name":"Speedup","score":0.6365481615066528},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.5831421613693237},{"id":"https://openalex.org/keywords/overhead","display_name":"Overhead (engineering)","score":0.5544023513793945},{"id":"https://openalex.org/keywords/pruning","display_name":"Pruning","score":0.5076533555984497},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5015058517456055},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4702410101890564},{"id":"https://openalex.org/keywords/massively-parallel","display_name":"Massively parallel","score":0.4422605633735657},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.4367290139198303},{"id":"https://openalex.org/keywords/search-algorithm","display_name":"Search algorithm","score":0.4128953814506531},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.33093559741973877},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13069963455200195},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12589386105537415}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8401802182197571},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.6365481615066528},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.5831421613693237},{"id":"https://openalex.org/C2779960059","wikidata":"https://www.wikidata.org/wiki/Q7113681","display_name":"Overhead (engineering)","level":2,"score":0.5544023513793945},{"id":"https://openalex.org/C108010975","wikidata":"https://www.wikidata.org/wiki/Q500094","display_name":"Pruning","level":2,"score":0.5076533555984497},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5015058517456055},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4702410101890564},{"id":"https://openalex.org/C190475519","wikidata":"https://www.wikidata.org/wiki/Q544384","display_name":"Massively parallel","level":2,"score":0.4422605633735657},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.4367290139198303},{"id":"https://openalex.org/C125583679","wikidata":"https://www.wikidata.org/wiki/Q755673","display_name":"Search algorithm","level":2,"score":0.4128953814506531},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.33093559741973877},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13069963455200195},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12589386105537415},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015202","descriptor_name":"Protein Engineering","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D015202","descriptor_name":"Protein Engineering","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D015202","descriptor_name":"Protein Engineering","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btu264","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu264","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/12/i255/48923818/bioinformatics_30_12_i255.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24931991","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24931991","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4058937","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4058937","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu264","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu264","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/12/i255/48923818/bioinformatics_30_12_i255.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Affordable and clean energy","score":0.6899999976158142,"id":"https://metadata.un.org/sdg/7"}],"awards":[{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G325743107","display_name":null,"funder_award_id":"61033001","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4886626501","display_name":null,"funder_award_id":"2011CBA00301","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G680756813","display_name":null,"funder_award_id":"61033001","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7219872841","display_name":null,"funder_award_id":"61361136003","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G741395852","display_name":null,"funder_award_id":"2011CBA00300, 2011CBA00301","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G7798674883","display_name":null,"funder_award_id":"61033001, 61361136003","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G832729633","display_name":null,"funder_award_id":"61136003","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8514270459","display_name":null,"funder_award_id":"61361136003","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8596328259","display_name":null,"funder_award_id":"6136113600","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8623030917","display_name":null,"funder_award_id":"2011CBA00300","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8745044071","display_name":null,"funder_award_id":"R01 GM-78031","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2127594626.pdf","grobid_xml":"https://content.openalex.org/works/W2127594626.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W8140907","https://openalex.org/W38076005","https://openalex.org/W1721447212","https://openalex.org/W1813117265","https://openalex.org/W1972728295","https://openalex.org/W1974647057","https://openalex.org/W1980703922","https://openalex.org/W1995596660","https://openalex.org/W1996576490","https://openalex.org/W2012987401","https://openalex.org/W2020530495","https://openalex.org/W2034882714","https://openalex.org/W2036502774","https://openalex.org/W2055676969","https://openalex.org/W2073125464","https://openalex.org/W2096648003","https://openalex.org/W2097649955","https://openalex.org/W2101712920","https://openalex.org/W2106775540","https://openalex.org/W2109948087","https://openalex.org/W2118558147","https://openalex.org/W2119547137","https://openalex.org/W2134634502","https://openalex.org/W2134759124","https://openalex.org/W2135815512","https://openalex.org/W2136531952","https://openalex.org/W2137804461","https://openalex.org/W2145898846","https://openalex.org/W2150470619","https://openalex.org/W2169660606","https://openalex.org/W2172114588","https://openalex.org/W2611076569","https://openalex.org/W6601538878","https://openalex.org/W6678107477"],"related_works":["https://openalex.org/W2058965144","https://openalex.org/W2164382479","https://openalex.org/W98480971","https://openalex.org/W2150291671","https://openalex.org/W2027972911","https://openalex.org/W2146343568","https://openalex.org/W2013643406","https://openalex.org/W2157978810","https://openalex.org/W2056543843","https://openalex.org/W1966837078"],"abstract_inverted_index":{"Our":[0],"software":[1],"is":[2],"available":[3],"and":[4],"distributed":[5],"open-source":[6],"under":[7],"the":[8],"GNU":[9],"Lesser":[10],"General":[11],"License":[12],"Version":[13],"2.1":[14],"(GNU,":[15],"February":[16],"1999).":[17],"The":[18],"source":[19],"code":[20],"can":[21],"be":[22],"downloaded":[23],"from":[24],"http://www.cs.duke.edu/donaldlab/osprey.php":[25],"or":[26],"http://iiis.tsinghua.edu.cn/\u223ccompbio/software.html.":[27]},"counts_by_year":[{"year":2021,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":4}],"updated_date":"2026-04-19T08:26:33.389920","created_date":"2025-10-10T00:00:00"}
