{"id":"https://openalex.org/W2101186567","doi":"https://doi.org/10.1093/bioinformatics/btu148","title":"A framework for installable external tools in Skyline","display_name":"A framework for installable external tools in Skyline","publication_year":2014,"publication_date":"2014-05-09","ids":{"openalex":"https://openalex.org/W2101186567","doi":"https://doi.org/10.1093/bioinformatics/btu148","mag":"2101186567","pmid":"https://pubmed.ncbi.nlm.nih.gov/24813211"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu148","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu148","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/17/2521/48927615/bioinformatics_30_17_2521.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/17/2521/48927615/bioinformatics_30_17_2521.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072838784","display_name":"Daniel Broudy","orcid":null},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Broudy","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079869401","display_name":"Trevor Killeen","orcid":null},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Trevor Killeen","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013802780","display_name":"Meena Choi","orcid":"https://orcid.org/0000-0002-6025-5035"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meena Choi","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041963504","display_name":"Nicholas Shulman","orcid":"https://orcid.org/0000-0003-1674-0794"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nicholas Shulman","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015184631","display_name":"D.R. Mani","orcid":"https://orcid.org/0000-0003-3914-133X"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Deepak R. Mani","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073281719","display_name":"Susan E. Abbatiello","orcid":"https://orcid.org/0000-0001-7477-2749"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan E. Abbatiello","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015184631","display_name":"D.R. Mani","orcid":"https://orcid.org/0000-0003-3914-133X"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Deepak Mani","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035429491","display_name":"Rushdy Ahmad","orcid":"https://orcid.org/0000-0003-2115-9478"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rushdy Ahmad","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001549694","display_name":"Alexandria K. Sahu","orcid":null},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexandria K. Sahu","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003883020","display_name":"Birgit Schilling","orcid":"https://orcid.org/0000-0001-9907-2749"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Birgit Schilling","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012275513","display_name":"Kaipo Tamura","orcid":null},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kaipo Tamura","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001646758","display_name":"Yuval Boss","orcid":null},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yuval Boss","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101918119","display_name":"Vagisha Sharma","orcid":"https://orcid.org/0000-0003-1922-439X"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vagisha Sharma","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056510065","display_name":"Bradford W. Gibson","orcid":"https://orcid.org/0000-0003-3745-1940"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bradford W. Gibson","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036255260","display_name":"Steven A. Carr","orcid":"https://orcid.org/0000-0002-7203-4299"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven A. Carr","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088073215","display_name":"Olga Vitek","orcid":"https://orcid.org/0000-0003-1728-1104"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Olga Vitek","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043959168","display_name":"Michael J. MacCoss","orcid":"https://orcid.org/0000-0003-1853-0256"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael J. MacCoss","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031754851","display_name":"Brendan MacLean","orcid":"https://orcid.org/0000-0002-9575-0255"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1337826666","display_name":"Buck Institute for Research on Aging","ror":"https://ror.org/050sv4x28","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1337826666"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Brendan MacLean","raw_affiliation_strings":["1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a01Department of Genome Sciences, University of Washington, Seattle, WA 98195, 2Department of Statistics, Purdue University, West Lafayette, IN 47907, 3Broad Institute of MIT and Harvard, Cambridge, MA 02142 and 4Buck Institute for Research on Aging, Novato, CA 94945, USA","institution_ids":["https://openalex.org/I1337826666","https://openalex.org/I219193219","https://openalex.org/I107606265","https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":18,"corresponding_author_ids":["https://openalex.org/A5031754851"],"corresponding_institution_ids":["https://openalex.org/I107606265","https://openalex.org/I1337826666","https://openalex.org/I201448701","https://openalex.org/I219193219"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":3.0726,"has_fulltext":true,"cited_by_count":36,"citation_normalized_percentile":{"value":0.91789909,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"30","issue":"17","first_page":"2521","last_page":"2523"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11106","display_name":"Data Management and Algorithms","score":0.9642000198364258,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/skyline","display_name":"Skyline","score":0.9871234893798828},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7604830265045166},{"id":"https://openalex.org/keywords/codebase","display_name":"Codebase","score":0.753246009349823},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.5683603286743164},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.46701911091804504},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4547123908996582},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.41523343324661255},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4023038148880005},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.11975321173667908}],"concepts":[{"id":"https://openalex.org/C2780757406","wikidata":"https://www.wikidata.org/wiki/Q465837","display_name":"Skyline","level":2,"score":0.9871234893798828},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7604830265045166},{"id":"https://openalex.org/C51929080","wikidata":"https://www.wikidata.org/wiki/Q2425187","display_name":"Codebase","level":3,"score":0.753246009349823},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.5683603286743164},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.46701911091804504},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4547123908996582},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.41523343324661255},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4023038148880005},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.11975321173667908},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btu148","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu148","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/17/2521/48927615/bioinformatics_30_17_2521.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24813211","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24813211","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4147880","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4147880","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu148","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu148","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/17/2521/48927615/bioinformatics_30_17_2521.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.44999998807907104}],"awards":[{"id":"https://openalex.org/G1131292509","display_name":null,"funder_award_id":"GM10355","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7324577958","display_name":null,"funder_award_id":"R01 GM103551","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2101186567.pdf","grobid_xml":"https://content.openalex.org/works/W2101186567.grobid-xml"},"referenced_works_count":3,"referenced_works":["https://openalex.org/W2114165700","https://openalex.org/W2129528062","https://openalex.org/W2141091417"],"related_works":["https://openalex.org/W1994126304","https://openalex.org/W2087306197","https://openalex.org/W1973297295","https://openalex.org/W2316530548","https://openalex.org/W2505069962","https://openalex.org/W3096764880","https://openalex.org/W2039842051","https://openalex.org/W2317048282","https://openalex.org/W102592377","https://openalex.org/W2101186567"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}