{"id":"https://openalex.org/W2150821298","doi":"https://doi.org/10.1093/bioinformatics/btt135","title":"CistromeFinder for ChIP-seq and DNase-seq data reuse","display_name":"CistromeFinder for ChIP-seq and DNase-seq data reuse","publication_year":2013,"publication_date":"2013-03-18","ids":{"openalex":"https://openalex.org/W2150821298","doi":"https://doi.org/10.1093/bioinformatics/btt135","mag":"2150821298","pmid":"https://pubmed.ncbi.nlm.nih.gov/23508969"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt135","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt135","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/10/1352/715105/btt135.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/10/1352/715105/btt135.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016231964","display_name":"Hanfei Sun","orcid":null},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Hanfei Sun","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088622606","display_name":"Bo Qin","orcid":"https://orcid.org/0000-0001-7093-6531"},"institutions":[{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Bo Qin","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100338122","display_name":"Tao Liu","orcid":"https://orcid.org/0000-0002-8818-8313"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Tao Liu","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051667992","display_name":"Qixuan Wang","orcid":"https://orcid.org/0000-0001-6612-3634"},"institutions":[{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Qixuan Wang","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116016368","display_name":"Jing Liu","orcid":"https://orcid.org/0000-0002-9377-1626"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Jing Liu","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100347481","display_name":"Juan Wang","orcid":"https://orcid.org/0000-0003-2244-6102"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Juan Wang","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065271113","display_name":"Xueqiu Lin","orcid":"https://orcid.org/0000-0001-8706-9657"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Xueqiu Lin","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006125769","display_name":"Yu\u2010Lin Yang","orcid":"https://orcid.org/0000-0002-0380-4237"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Yulin Yang","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055277353","display_name":"Len Taing","orcid":"https://orcid.org/0000-0001-7453-5372"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Len Taing","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013531754","display_name":"Prakash K. Rao","orcid":null},"institutions":[{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Prakash K. Rao","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033532061","display_name":"Myles Brown","orcid":"https://orcid.org/0000-0002-8213-1658"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Myles Brown","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007650371","display_name":"Yong Zhang","orcid":"https://orcid.org/0000-0001-6316-2734"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Yong Zhang","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066070097","display_name":"Henry W. Long","orcid":"https://orcid.org/0000-0001-6849-6629"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Henry W. Long","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045575546","display_name":"X. Shirley Liu","orcid":"https://orcid.org/0000-0003-4736-7339"},"institutions":[{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"X. Shirley Liu","raw_affiliation_strings":["1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai 20092, China, 2Center for Functional Cancer Epigenetics, Dana-Faber Cancer Institute, Boston, MA 02215, USA, 3Department of Biostatistics and Computational Biology, Dana-Faber Cancer Institute and Harvard School of Public Health, Boston, MA 02215, USA, 4Division of Molecular and Cellular Oncology, Department of Medical Oncology, Dana-Farber Cancer Institute and 5Department of Medicine, Brigham and Women\u2019s Hospital and Harvard Medical School, Boston, MA 02215, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984","https://openalex.org/I116953780"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5045575546","https://openalex.org/A5066070097"],"corresponding_institution_ids":["https://openalex.org/I116953780","https://openalex.org/I136199984","https://openalex.org/I4210117453"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.9467,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.86311738,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"29","issue":"10","first_page":"1352","last_page":"1354"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.7646694183349609},{"id":"https://openalex.org/keywords/chromatin-immunoprecipitation","display_name":"Chromatin immunoprecipitation","score":0.6818976402282715},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5678858160972595},{"id":"https://openalex.org/keywords/chromatin","display_name":"Chromatin","score":0.5027410984039307},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4955350160598755},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4750533103942871},{"id":"https://openalex.org/keywords/chip-sequencing","display_name":"ChIP-sequencing","score":0.4401002824306488},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3653547465801239},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.3614814281463623},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.35752394795417786},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.269831120967865},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2248118817806244},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18984860181808472},{"id":"https://openalex.org/keywords/chromatin-remodeling","display_name":"Chromatin remodeling","score":0.144137442111969},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.10849913954734802},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.0971839427947998},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.06542313098907471}],"concepts":[{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.7646694183349609},{"id":"https://openalex.org/C134320426","wikidata":"https://www.wikidata.org/wiki/Q901026","display_name":"Chromatin immunoprecipitation","level":5,"score":0.6818976402282715},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5678858160972595},{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.5027410984039307},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4955350160598755},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4750533103942871},{"id":"https://openalex.org/C176619506","wikidata":"https://www.wikidata.org/wiki/Q5065899","display_name":"ChIP-sequencing","level":5,"score":0.4401002824306488},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3653547465801239},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.3614814281463623},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.35752394795417786},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.269831120967865},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2248118817806244},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18984860181808472},{"id":"https://openalex.org/C167227067","wikidata":"https://www.wikidata.org/wiki/Q5113739","display_name":"Chromatin remodeling","level":4,"score":0.144137442111969},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.10849913954734802},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0971839427947998},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.06542313098907471}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003850","descriptor_name":"Deoxyribonuclease I","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003850","descriptor_name":"Deoxyribonuclease I","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003850","descriptor_name":"Deoxyribonuclease I","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D047369","descriptor_name":"Chromatin Immunoprecipitation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047369","descriptor_name":"Chromatin Immunoprecipitation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047369","descriptor_name":"Chromatin Immunoprecipitation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btt135","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt135","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/10/1352/715105/btt135.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23508969","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23508969","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:2995732","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3654708","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3654708","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3654708","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt135","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt135","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/10/1352/715105/btt135.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4300000071525574,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1690469056","display_name":null,"funder_award_id":"31028011","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2150821298.pdf","grobid_xml":"https://content.openalex.org/works/W2150821298.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1544691147","https://openalex.org/W1964963969","https://openalex.org/W2084160423","https://openalex.org/W2120358246","https://openalex.org/W2123460634","https://openalex.org/W2124425346","https://openalex.org/W2124985265","https://openalex.org/W2125362831","https://openalex.org/W2128016314","https://openalex.org/W2162098634","https://openalex.org/W2167852161","https://openalex.org/W2171808845"],"related_works":["https://openalex.org/W2289499401","https://openalex.org/W2076891695","https://openalex.org/W2610477594","https://openalex.org/W2971816719","https://openalex.org/W4207076385","https://openalex.org/W2586209022","https://openalex.org/W2787900975","https://openalex.org/W2142244017","https://openalex.org/W2166762931","https://openalex.org/W2127835459"],"abstract_inverted_index":{"xsliu@jimmy.harvard.edu":[0],"or":[1],"henry_long@dfci.harvard.edu.":[2]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":2}],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2025-10-10T00:00:00"}