{"id":"https://openalex.org/W2152026276","doi":"https://doi.org/10.1093/bioinformatics/btt019","title":"CluePedia Cytoscape plugin: pathway insights using integrated experimental and <i>in silico</i> data","display_name":"CluePedia Cytoscape plugin: pathway insights using integrated experimental and <i>in silico</i> data","publication_year":2013,"publication_date":"2013-01-16","ids":{"openalex":"https://openalex.org/W2152026276","doi":"https://doi.org/10.1093/bioinformatics/btt019","mag":"2152026276","pmid":"https://pubmed.ncbi.nlm.nih.gov/23325622"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt019","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt019","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/5/661/16918665/btt019.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/5/661/16918665/btt019.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062069569","display_name":"Gabriela Bindea","orcid":"https://orcid.org/0000-0001-6013-6645"},"institutions":[{"id":"https://openalex.org/I4210133830","display_name":"Laboratoire d\u2019immunologie int\u00e9grative du cancer","ror":"https://ror.org/03cqwn895","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I39804081","https://openalex.org/I4210092322","https://openalex.org/I4210133830"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210092322","display_name":"Centre de Recherche des Cordeliers","ror":"https://ror.org/00dmms154","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210092322"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Gabriela Bindea","raw_affiliation_strings":["1 INSERM, Laboratory of Integrative Cancer Immunology, 75006 Paris, 2Cordeliers Research Center, Universit\u00e9 Paris Descartes, 75006 Paris and 3Cordeliers Research Center, Universit\u00e9 Pierre et Marie Curie Paris 6, Cordeliers Research Center, 75005 Paris, France"],"affiliations":[{"raw_affiliation_string":"1 INSERM, Laboratory of Integrative Cancer Immunology, 75006 Paris, 2Cordeliers Research Center, Universit\u00e9 Paris Descartes, 75006 Paris and 3Cordeliers Research Center, Universit\u00e9 Pierre et Marie Curie Paris 6, Cordeliers Research Center, 75005 Paris, France","institution_ids":["https://openalex.org/I4210092322","https://openalex.org/I154526488","https://openalex.org/I4210133830","https://openalex.org/I39804081","https://openalex.org/I204730241"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070615133","display_name":"J\u00e9r\u00f4me Galon","orcid":"https://orcid.org/0000-0001-9635-1339"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210092322","display_name":"Centre de Recherche des Cordeliers","ror":"https://ror.org/00dmms154","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210092322"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210133830","display_name":"Laboratoire d\u2019immunologie int\u00e9grative du cancer","ror":"https://ror.org/03cqwn895","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I39804081","https://openalex.org/I4210092322","https://openalex.org/I4210133830"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"J\u00e9r\u00f4me Galon","raw_affiliation_strings":["1 INSERM, Laboratory of Integrative Cancer Immunology, 75006 Paris, 2Cordeliers Research Center, Universit\u00e9 Paris Descartes, 75006 Paris and 3Cordeliers Research Center, Universit\u00e9 Pierre et Marie Curie Paris 6, Cordeliers Research Center, 75005 Paris, France"],"affiliations":[{"raw_affiliation_string":"1 INSERM, Laboratory of Integrative Cancer Immunology, 75006 Paris, 2Cordeliers Research Center, Universit\u00e9 Paris Descartes, 75006 Paris and 3Cordeliers Research Center, Universit\u00e9 Pierre et Marie Curie Paris 6, Cordeliers Research Center, 75005 Paris, France","institution_ids":["https://openalex.org/I4210092322","https://openalex.org/I154526488","https://openalex.org/I4210133830","https://openalex.org/I39804081","https://openalex.org/I204730241"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078219830","display_name":"Bernhard Mlecnik","orcid":"https://orcid.org/0000-0002-3345-1030"},"institutions":[{"id":"https://openalex.org/I4210133830","display_name":"Laboratoire d\u2019immunologie int\u00e9grative du cancer","ror":"https://ror.org/03cqwn895","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I39804081","https://openalex.org/I4210092322","https://openalex.org/I4210133830"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210092322","display_name":"Centre de Recherche des Cordeliers","ror":"https://ror.org/00dmms154","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210092322"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Bernhard Mlecnik","raw_affiliation_strings":["1 INSERM, Laboratory of Integrative Cancer Immunology, 75006 Paris, 2Cordeliers Research Center, Universit\u00e9 Paris Descartes, 75006 Paris and 3Cordeliers Research Center, Universit\u00e9 Pierre et Marie Curie Paris 6, Cordeliers Research Center, 75005 Paris, France"],"affiliations":[{"raw_affiliation_string":"1 INSERM, Laboratory of Integrative Cancer Immunology, 75006 Paris, 2Cordeliers Research Center, Universit\u00e9 Paris Descartes, 75006 Paris and 3Cordeliers Research Center, Universit\u00e9 Pierre et Marie Curie Paris 6, Cordeliers Research Center, 75005 Paris, France","institution_ids":["https://openalex.org/I4210092322","https://openalex.org/I154526488","https://openalex.org/I4210133830","https://openalex.org/I39804081","https://openalex.org/I204730241"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5070615133","https://openalex.org/A5078219830"],"corresponding_institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210092322","https://openalex.org/I4210133830"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":17.0705,"has_fulltext":false,"cited_by_count":1108,"citation_normalized_percentile":{"value":0.9954058,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"29","issue":"5","first_page":"661","last_page":"663"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.9649760723114014},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.7955754399299622},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7057251930236816},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6085754036903381},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4597485363483429},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4134875535964966},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.37471094727516174},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37237703800201416},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3149945139884949},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.23900830745697021},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1332625448703766},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10458338260650635}],"concepts":[{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.9649760723114014},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.7955754399299622},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7057251930236816},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6085754036903381},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4597485363483429},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4134875535964966},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.37471094727516174},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37237703800201416},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3149945139884949},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.23900830745697021},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1332625448703766},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10458338260650635}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btt019","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt019","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/5/661/16918665/btt019.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23325622","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23325622","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:2579195","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3582273","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3582273","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3582273","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt019","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt019","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/5/661/16918665/btt019.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2152026276.pdf","grobid_xml":"https://content.openalex.org/works/W2152026276.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1771155305","https://openalex.org/W2000860171","https://openalex.org/W2017426710","https://openalex.org/W2023205960","https://openalex.org/W2024858956","https://openalex.org/W2028133290","https://openalex.org/W2046182607","https://openalex.org/W2057545775","https://openalex.org/W2103017472","https://openalex.org/W2132034930","https://openalex.org/W2134118500","https://openalex.org/W2136482324","https://openalex.org/W2140000393","https://openalex.org/W2159675211","https://openalex.org/W2165253681","https://openalex.org/W2165700458","https://openalex.org/W2166542841","https://openalex.org/W2169589032","https://openalex.org/W6656136078"],"related_works":["https://openalex.org/W47352601","https://openalex.org/W2981957539","https://openalex.org/W4287378204","https://openalex.org/W2545422590","https://openalex.org/W4240705470","https://openalex.org/W2945311252","https://openalex.org/W2912862995","https://openalex.org/W3129816939","https://openalex.org/W2985427592","https://openalex.org/W631546281"],"abstract_inverted_index":{"http://www.ici.upmc.fr/cluepedia/":[0],"and":[1],"via":[2],"the":[3,13],"Cytoscape":[4],"plugin":[5],"manager.":[6],"The":[7],"user":[8],"manual":[9],"is":[10],"available":[11],"at":[12],"CluePedia":[14],"website.":[15]},"counts_by_year":[{"year":2026,"cited_by_count":13},{"year":2025,"cited_by_count":73},{"year":2024,"cited_by_count":65},{"year":2023,"cited_by_count":104},{"year":2022,"cited_by_count":137},{"year":2021,"cited_by_count":175},{"year":2020,"cited_by_count":164},{"year":2019,"cited_by_count":120},{"year":2018,"cited_by_count":82},{"year":2017,"cited_by_count":60},{"year":2016,"cited_by_count":51},{"year":2015,"cited_by_count":35},{"year":2014,"cited_by_count":24},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2016-06-24T00:00:00"}
