{"id":"https://openalex.org/W2145748421","doi":"https://doi.org/10.1093/bioinformatics/bts366","title":"GO-Elite: a flexible solution for pathway and ontology over-representation","display_name":"GO-Elite: a flexible solution for pathway and ontology over-representation","publication_year":2012,"publication_date":"2012-06-27","ids":{"openalex":"https://openalex.org/W2145748421","doi":"https://doi.org/10.1093/bioinformatics/bts366","mag":"2145748421","pmid":"https://pubmed.ncbi.nlm.nih.gov/22743224"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts366","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/16/2209/16906007/bts366.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/16/2209/16906007/bts366.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013084636","display_name":"Alexander C. Zambon","orcid":"https://orcid.org/0000-0001-7874-4462"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL","US"],"is_corresponding":true,"raw_author_name":"Alexander C. Zambon","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022407711","display_name":"Stan Gaj","orcid":null},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Stan Gaj","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039785034","display_name":"Isaac Ho","orcid":null},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Isaac Ho","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063972221","display_name":"Kristina Hanspers","orcid":"https://orcid.org/0000-0001-5410-599X"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Kristina Hanspers","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111733160","display_name":"Karen Vranizan","orcid":null},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Karen Vranizan","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075750072","display_name":"Chris T. Evelo","orcid":"https://orcid.org/0000-0002-5301-3142"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Chris T. Evelo","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051428406","display_name":"Bruce R. Conklin","orcid":"https://orcid.org/0000-0003-1463-6061"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Bruce R. Conklin","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070456387","display_name":"Alexander R. Pico","orcid":"https://orcid.org/0000-0001-5706-2163"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Alexander R. Pico","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058320928","display_name":"Nathan Salomonis","orcid":"https://orcid.org/0000-0001-9689-2469"},"institutions":[{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]},{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Nathan Salomonis","raw_affiliation_strings":["1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA"],"affiliations":[{"raw_affiliation_string":"1 Departments of Pharmacology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA, 2Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands, 3Gladstone Institute of Cardiovascular Disease and 4Departments of Medicine and Molecular and Cellular Pharmacology, University of California, San Francisco, CA 94158, USA","institution_ids":["https://openalex.org/I34352273","https://openalex.org/I180670191"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5013084636"],"corresponding_institution_ids":["https://openalex.org/I180670191","https://openalex.org/I34352273"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":7.7985,"has_fulltext":false,"cited_by_count":283,"citation_normalized_percentile":{"value":0.98280766,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"28","issue":"16","first_page":"2209","last_page":"2210"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.7569271922111511},{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.6331825852394104},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6115733981132507},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.601787805557251},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.5304412841796875},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.4655953347682953},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.46496444940567017},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.43018078804016113},{"id":"https://openalex.org/keywords/elite","display_name":"Elite","score":0.4142056405544281},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.36801591515541077},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.34947097301483154},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3218122720718384},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.24683517217636108},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.156915545463562},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12690210342407227},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1242271363735199}],"concepts":[{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.7569271922111511},{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.6331825852394104},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6115733981132507},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.601787805557251},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.5304412841796875},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.4655953347682953},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.46496444940567017},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.43018078804016113},{"id":"https://openalex.org/C2775987171","wikidata":"https://www.wikidata.org/wiki/Q192797","display_name":"Elite","level":3,"score":0.4142056405544281},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.36801591515541077},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.34947097301483154},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3218122720718384},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.24683517217636108},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.156915545463562},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12690210342407227},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1242271363735199},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/bts366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts366","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/16/2209/16906007/bts366.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22743224","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22743224","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:cris.maastrichtuniversity.nl:openaire/75dc29c4-d2a9-4f3e-8816-cdff8132d357","is_oa":false,"landing_page_url":"https://cris.maastrichtuniversity.nl/en/publications/75dc29c4-d2a9-4f3e-8816-cdff8132d357","pdf_url":null,"source":{"id":"https://openalex.org/S4306402616","display_name":"Research Publications (Maastricht University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I34352273","host_organization_name":"Maastricht University","host_organization_lineage":["https://openalex.org/I34352273"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Zambon, A C, Gaj, S, Ho, I, Hanspers, K, Vranizan, K, Evelo, C T A, Conklin, B R, Pico, A R & Salomonis, N 2012, 'GO-Elite: a flexible solution for pathway and ontology over-representation.', Bioinformatics, vol. 28, no. 16, pp. 2209-2210. https://doi.org/10.1093/bioinformatics/bts366","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt4rq469h6","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/4rq469h6","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics (Oxford, England), vol 28, iss 16","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2418721","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3413395","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts366","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/16/2209/16906007/bts366.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2145748421.pdf","grobid_xml":"https://content.openalex.org/works/W2145748421.grobid-xml"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W2071830424","https://openalex.org/W2108539496","https://openalex.org/W2111619115","https://openalex.org/W2131989143","https://openalex.org/W2133465414","https://openalex.org/W2141156480","https://openalex.org/W2153493935","https://openalex.org/W2166048811"],"related_works":["https://openalex.org/W3173976592","https://openalex.org/W4287378204","https://openalex.org/W2981957539","https://openalex.org/W47352601","https://openalex.org/W4386010110","https://openalex.org/W650538140","https://openalex.org/W2545422590","https://openalex.org/W4240705470","https://openalex.org/W2322432826","https://openalex.org/W2047008865"],"abstract_inverted_index":{"http://www.genmapp.org/go_elite":[0]},"counts_by_year":[{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":14},{"year":2021,"cited_by_count":39},{"year":2020,"cited_by_count":30},{"year":2019,"cited_by_count":35},{"year":2018,"cited_by_count":35},{"year":2017,"cited_by_count":28},{"year":2016,"cited_by_count":23},{"year":2015,"cited_by_count":20},{"year":2014,"cited_by_count":27},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
