{"id":"https://openalex.org/W2119451273","doi":"https://doi.org/10.1093/bioinformatics/bts277","title":"BEDOPS: high-performance genomic feature operations","display_name":"BEDOPS: high-performance genomic feature operations","publication_year":2012,"publication_date":"2012-05-09","ids":{"openalex":"https://openalex.org/W2119451273","doi":"https://doi.org/10.1093/bioinformatics/bts277","mag":"2119451273","pmid":"https://pubmed.ncbi.nlm.nih.gov/22576172"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts277","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts277","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/14/1919/48870388/bioinformatics_28_14_1919.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/14/1919/48870388/bioinformatics_28_14_1919.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077099192","display_name":"Shane Neph","orcid":"https://orcid.org/0000-0003-2962-8777"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Shane Neph","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103551801","display_name":"Michael S. Kuehn","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Scott Kuehn","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042642744","display_name":"Alex Reynolds","orcid":"https://orcid.org/0000-0003-0382-4921"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alex P. Reynolds","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026268911","display_name":"Eric Haugen","orcid":"https://orcid.org/0000-0001-7444-8981"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric Haugen","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040512461","display_name":"Robert E. Thurman","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert E. Thurman","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103782022","display_name":"Audra Johnson","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Audra K. Johnson","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088660764","display_name":"Eric Rynes","orcid":"https://orcid.org/0000-0003-0620-631X"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric Rynes","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051109596","display_name":"Matthew T. Maurano","orcid":"https://orcid.org/0000-0002-2218-8628"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew T. Maurano","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027054450","display_name":"Jeff Vierstra","orcid":"https://orcid.org/0000-0001-6406-8563"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeff Vierstra","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102992304","display_name":"Sean Thomas","orcid":"https://orcid.org/0000-0001-8446-0191"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sean Thomas","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015944898","display_name":"Richard Sandstrom","orcid":"https://orcid.org/0000-0002-3356-1547"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Richard Sandstrom","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109212670","display_name":"Richard Humbert","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Richard Humbert","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006847496","display_name":"J Stamatoyannopoulos","orcid":"https://orcid.org/0000-0002-2664-5769"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John A. Stamatoyannopoulos","raw_affiliation_strings":["1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Genome Sciences and 2Department of Medicine, University of Washington, Seattle, Washington, DC 98195, USA","institution_ids":["https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":13,"corresponding_author_ids":["https://openalex.org/A5077099192"],"corresponding_institution_ids":["https://openalex.org/I201448701"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":9.1437,"has_fulltext":false,"cited_by_count":1162,"citation_normalized_percentile":{"value":0.98686394,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"28","issue":"14","first_page":"1919","last_page":"1920"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8402971029281616},{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.8052140474319458},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6828528046607971},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.6283375024795532},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6081814169883728},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.593707263469696},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5628578066825867},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5616165995597839},{"id":"https://openalex.org/keywords/software-suite","display_name":"Software suite","score":0.5039650797843933},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.45281922817230225},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.44555193185806274},{"id":"https://openalex.org/keywords/lossless-compression","display_name":"Lossless compression","score":0.4156811237335205},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.29590126872062683},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2405693233013153},{"id":"https://openalex.org/keywords/data-compression","display_name":"Data compression","score":0.22935697436332703},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.12212851643562317}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8402971029281616},{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.8052140474319458},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6828528046607971},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.6283375024795532},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6081814169883728},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.593707263469696},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5628578066825867},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5616165995597839},{"id":"https://openalex.org/C2778736646","wikidata":"https://www.wikidata.org/wiki/Q1143070","display_name":"Software suite","level":3,"score":0.5039650797843933},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.45281922817230225},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.44555193185806274},{"id":"https://openalex.org/C81081738","wikidata":"https://www.wikidata.org/wiki/Q55542","display_name":"Lossless compression","level":3,"score":0.4156811237335205},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.29590126872062683},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2405693233013153},{"id":"https://openalex.org/C78548338","wikidata":"https://www.wikidata.org/wiki/Q2493","display_name":"Data compression","level":2,"score":0.22935697436332703},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.12212851643562317},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bts277","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts277","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/14/1919/48870388/bioinformatics_28_14_1919.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22576172","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22576172","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:2705534","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3389768","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3389768","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3389768","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts277","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts277","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/14/1919/48870388/bioinformatics_28_14_1919.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2119451273.pdf","grobid_xml":"https://content.openalex.org/works/W2119451273.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W2102619694","https://openalex.org/W2108234281","https://openalex.org/W2128016314","https://openalex.org/W2149992227","https://openalex.org/W2161645441","https://openalex.org/W2167852161"],"related_works":["https://openalex.org/W1516095885","https://openalex.org/W4231704780","https://openalex.org/W2158573927","https://openalex.org/W2108921801","https://openalex.org/W1981336497","https://openalex.org/W4206079007","https://openalex.org/W2398058485","https://openalex.org/W254965819","https://openalex.org/W3156231268","https://openalex.org/W4205365843"],"abstract_inverted_index":{"http://code.google.com/p/bedops/":[0],"includes":[1],"binaries,":[2],"source":[3],"and":[4],"documentation.":[5]},"counts_by_year":[{"year":2026,"cited_by_count":24},{"year":2025,"cited_by_count":107},{"year":2024,"cited_by_count":180},{"year":2023,"cited_by_count":135},{"year":2022,"cited_by_count":125},{"year":2021,"cited_by_count":122},{"year":2020,"cited_by_count":121},{"year":2019,"cited_by_count":110},{"year":2018,"cited_by_count":69},{"year":2017,"cited_by_count":52},{"year":2016,"cited_by_count":49},{"year":2015,"cited_by_count":26},{"year":2014,"cited_by_count":26},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":6}],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2025-10-10T00:00:00"}
