{"id":"https://openalex.org/W2109819853","doi":"https://doi.org/10.1093/bioinformatics/btr251","title":"Systematic exploration of error sources in pyrosequencing flowgram data","display_name":"Systematic exploration of error sources in pyrosequencing flowgram data","publication_year":2011,"publication_date":"2011-06-14","ids":{"openalex":"https://openalex.org/W2109819853","doi":"https://doi.org/10.1093/bioinformatics/btr251","mag":"2109819853","pmid":"https://pubmed.ncbi.nlm.nih.gov/21685085"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr251","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr251","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/13/i304/48875955/bioinformatics_27_13_i304.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/13/i304/48875955/bioinformatics_27_13_i304.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016699956","display_name":"Susanne Balzer","orcid":null},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]},{"id":"https://openalex.org/I2802153510","display_name":"Norwegian Institute of Marine Research","ror":"https://ror.org/05vg74d16","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2802153510","https://openalex.org/I4210116418","https://openalex.org/I4210149801"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Susanne Balzer","raw_affiliation_strings":["1 Institute of Marine Research, P.O. Box 1870, N\u22125817 Bergen, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen and 3Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway"],"affiliations":[{"raw_affiliation_string":"1 Institute of Marine Research, P.O. Box 1870, N\u22125817 Bergen, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen and 3Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway","institution_ids":["https://openalex.org/I4432739","https://openalex.org/I2802153510"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061545123","display_name":"Ketil Malde","orcid":"https://orcid.org/0000-0001-7381-1849"},"institutions":[{"id":"https://openalex.org/I2802153510","display_name":"Norwegian Institute of Marine Research","ror":"https://ror.org/05vg74d16","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2802153510","https://openalex.org/I4210116418","https://openalex.org/I4210149801"]},{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Ketil Malde","raw_affiliation_strings":["1 Institute of Marine Research, P.O. Box 1870, N\u22125817 Bergen, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen and 3Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway"],"affiliations":[{"raw_affiliation_string":"1 Institute of Marine Research, P.O. Box 1870, N\u22125817 Bergen, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen and 3Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway","institution_ids":["https://openalex.org/I4432739","https://openalex.org/I2802153510"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012964587","display_name":"Inge Jonassen","orcid":"https://orcid.org/0000-0003-4110-0748"},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]},{"id":"https://openalex.org/I2802153510","display_name":"Norwegian Institute of Marine Research","ror":"https://ror.org/05vg74d16","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2802153510","https://openalex.org/I4210116418","https://openalex.org/I4210149801"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Inge Jonassen","raw_affiliation_strings":["1 Institute of Marine Research, P.O. Box 1870, N\u22125817 Bergen, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen and 3Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway"],"affiliations":[{"raw_affiliation_string":"1 Institute of Marine Research, P.O. Box 1870, N\u22125817 Bergen, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen and 3Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway","institution_ids":["https://openalex.org/I4432739","https://openalex.org/I2802153510"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5016699956"],"corresponding_institution_ids":["https://openalex.org/I2802153510","https://openalex.org/I4432739"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":5.6028,"has_fulltext":true,"cited_by_count":82,"citation_normalized_percentile":{"value":0.96937287,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"27","issue":"13","first_page":"i304","last_page":"i309"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9682000279426575,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10669","display_name":"Freshwater macroinvertebrate diversity and ecology","score":0.9386000037193298,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pyrosequencing","display_name":"Pyrosequencing","score":0.9252806901931763},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5656324028968811},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.43520402908325195},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.30068302154541016},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1771261990070343},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08338925242424011}],"concepts":[{"id":"https://openalex.org/C125009961","wikidata":"https://www.wikidata.org/wiki/Q2342248","display_name":"Pyrosequencing","level":3,"score":0.9252806901931763},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5656324028968811},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43520402908325195},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.30068302154541016},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1771261990070343},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08338925242424011}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001492","descriptor_name":"Bass","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001492","descriptor_name":"Bass","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001492","descriptor_name":"Bass","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btr251","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr251","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/13/i304/48875955/bioinformatics_27_13_i304.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21685085","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21685085","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:bora.uib.no:1956/7457","is_oa":true,"landing_page_url":"https://hdl.handle.net/1956/7457","pdf_url":null,"source":{"id":"https://openalex.org/S4306400085","display_name":"Bergen Open Research Archive (BORA) (University of Bergen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4432739","host_organization_name":"University of Bergen","host_organization_lineage":["https://openalex.org/I4432739"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"info:eu-repo/semantics/other"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:27/13/i304","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/27/13/i304","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3117331","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3117331","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr251","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr251","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/13/i304/48875955/bioinformatics_27_13_i304.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2096367874","display_name":null,"funder_award_id":"Project","funder_id":"https://openalex.org/F4320323299","funder_display_name":"Norges Forskningsr\u00e5d"},{"id":"https://openalex.org/G3748656914","display_name":null,"funder_award_id":"Norway","funder_id":"https://openalex.org/F4320323299","funder_display_name":"Norges Forskningsr\u00e5d"}],"funders":[{"id":"https://openalex.org/F4320320337","display_name":"University of Glasgow","ror":"https://ror.org/00vtgdb53"},{"id":"https://openalex.org/F4320323078","display_name":"Universitetet i Bergen","ror":"https://ror.org/03zga2b32"},{"id":"https://openalex.org/F4320323260","display_name":"Universitetet i Oslo","ror":"https://ror.org/01xtthb56"},{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2109819853.pdf","grobid_xml":"https://content.openalex.org/works/W2109819853.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1985726486","https://openalex.org/W1986473212","https://openalex.org/W2000072710","https://openalex.org/W2031207772","https://openalex.org/W2037532428","https://openalex.org/W2055043387","https://openalex.org/W2106308757","https://openalex.org/W2108166985","https://openalex.org/W2128114769","https://openalex.org/W2129067616","https://openalex.org/W2130077037","https://openalex.org/W2142403957","https://openalex.org/W2153993827","https://openalex.org/W2156125289","https://openalex.org/W2163236435"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2082860237","https://openalex.org/W2359295417","https://openalex.org/W2144480915","https://openalex.org/W2005015095","https://openalex.org/W2001808934","https://openalex.org/W2119695867","https://openalex.org/W2156417649","https://openalex.org/W2161558410","https://openalex.org/W2028431644"],"abstract_inverted_index":{"susanne.balzer@imr.no.":[0]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":20},{"year":2014,"cited_by_count":12},{"year":2013,"cited_by_count":14},{"year":2012,"cited_by_count":16}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
