{"id":"https://openalex.org/W2153167299","doi":"https://doi.org/10.1093/bioinformatics/btr035","title":"OrthoNets: simultaneous visual analysis of orthologs and their interaction neighborhoods across different organisms","display_name":"OrthoNets: simultaneous visual analysis of orthologs and their interaction neighborhoods across different organisms","publication_year":2011,"publication_date":"2011-01-20","ids":{"openalex":"https://openalex.org/W2153167299","doi":"https://doi.org/10.1093/bioinformatics/btr035","mag":"2153167299","pmid":"https://pubmed.ncbi.nlm.nih.gov/21257609"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr035","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/6/883/48865825/bioinformatics_27_6_883.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/6/883/48865825/bioinformatics_27_6_883.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054987803","display_name":"Yanqi Hao","orcid":null},"institutions":[{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Yanqi Hao","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031259929","display_name":"Anna Merkoulovitch","orcid":null},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]},{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Anna Merkoulovitch","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044558261","display_name":"James Vlasblom","orcid":null},"institutions":[{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]},{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"James Vlasblom","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040906445","display_name":"Shuye Pu","orcid":"https://orcid.org/0000-0002-6664-8438"},"institutions":[{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Shuye Pu","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027840785","display_name":"Andrei L. Turinsky","orcid":"https://orcid.org/0000-0002-5555-8461"},"institutions":[{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Andrei L. Turinsky","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002299910","display_name":"Denitza Roudeva","orcid":null},"institutions":[{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]},{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Denitza Roudeva","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020419781","display_name":"Brian Turner","orcid":"https://orcid.org/0000-0003-3150-3762"},"institutions":[{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]},{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Brian Turner","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102837838","display_name":"Jack Greenblatt","orcid":"https://orcid.org/0000-0003-1762-2861"},"institutions":[{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]},{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Jack Greenblatt","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074905519","display_name":"Shoshana J. Wodak","orcid":"https://orcid.org/0000-0002-0701-6545"},"institutions":[{"id":"https://openalex.org/I2801862477","display_name":"Canada Research Chairs","ror":"https://ror.org/0517h6h17","country_code":"CA","type":"government","lineage":["https://openalex.org/I2801862477","https://openalex.org/I2802286613"]},{"id":"https://openalex.org/I2801317318","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2801317318"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Shoshana J. Wodak","raw_affiliation_strings":["1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8"],"affiliations":[{"raw_affiliation_string":"1 Molecular Structure & Function program, Hospital for Sick Children, 555 University Ave, Toronto, ON, Canada M5G 1X8, 2Department of Biochemistry, 3Department of Molecular Genetics and 4Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, 1 King's College Circle, Toronto ON, Canada M5S 1A8","institution_ids":["https://openalex.org/I2801862477","https://openalex.org/I185261750","https://openalex.org/I2801317318"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5044558261"],"corresponding_institution_ids":["https://openalex.org/I185261750","https://openalex.org/I2801317318","https://openalex.org/I2801862477"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.1303,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.53449271,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"27","issue":"6","first_page":"883","last_page":"884"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9624999761581421,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9609000086784363,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7969108819961548},{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.7645022869110107},{"id":"https://openalex.org/keywords/organism","display_name":"Organism","score":0.7424299120903015},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6185727715492249},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.5303434133529663},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5295268893241882},{"id":"https://openalex.org/keywords/model-organism","display_name":"Model organism","score":0.5243411660194397},{"id":"https://openalex.org/keywords/protein-interaction-networks","display_name":"Protein Interaction Networks","score":0.4997897148132324},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32533925771713257},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1216905415058136},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09475332498550415},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08361908793449402},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.07392072677612305}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7969108819961548},{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.7645022869110107},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.7424299120903015},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6185727715492249},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.5303434133529663},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5295268893241882},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.5243411660194397},{"id":"https://openalex.org/C2909613950","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Protein Interaction Networks","level":3,"score":0.4997897148132324},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32533925771713257},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1216905415058136},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09475332498550415},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08361908793449402},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.07392072677612305}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btr035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr035","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/6/883/48865825/bioinformatics_27_6_883.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21257609","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21257609","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3051336","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3051336","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr035","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/6/883/48865825/bioinformatics_27_6_883.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323654","display_name":"Hospital for Sick Children","ror":"https://ror.org/057q4rt57"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2153167299.pdf","grobid_xml":"https://content.openalex.org/works/W2153167299.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1513938829","https://openalex.org/W1994127362","https://openalex.org/W2050721857","https://openalex.org/W2096083625","https://openalex.org/W2101181377","https://openalex.org/W2103856023","https://openalex.org/W2116117181","https://openalex.org/W2117513900","https://openalex.org/W2133102806","https://openalex.org/W2137464714","https://openalex.org/W2141885858","https://openalex.org/W2153724129","https://openalex.org/W2158197251","https://openalex.org/W2159675211","https://openalex.org/W2164813401","https://openalex.org/W4210400672","https://openalex.org/W6682345636"],"related_works":["https://openalex.org/W1967123050","https://openalex.org/W82005175","https://openalex.org/W2153167299","https://openalex.org/W2580045273","https://openalex.org/W2029974030","https://openalex.org/W2108238425","https://openalex.org/W1968617703","https://openalex.org/W2397051753","https://openalex.org/W428298599","https://openalex.org/W194554374"],"abstract_inverted_index":{"OrthoNets":[0],"is":[1],"freely":[2],"available":[3],"at":[4],"http://wodaklab.org/orthonets/.":[5]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
