{"id":"https://openalex.org/W2114154621","doi":"https://doi.org/10.1093/bioinformatics/btq712","title":"HiSpOD: probe design for functional DNA microarrays","display_name":"HiSpOD: probe design for functional DNA microarrays","publication_year":2011,"publication_date":"2011-01-06","ids":{"openalex":"https://openalex.org/W2114154621","doi":"https://doi.org/10.1093/bioinformatics/btq712","mag":"2114154621","pmid":"https://pubmed.ncbi.nlm.nih.gov/21216777"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq712","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq712","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/5/641/16902110/btq712.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/5/641/16902110/btq712.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062798672","display_name":"\u00c9ric Dugat\u2010Bony","orcid":"https://orcid.org/0000-0002-5182-0063"},"institutions":[{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I4210099416","display_name":"Laboratoire d'Informatique, de Mod\u00e9lisation et d'Optimisation des Syst\u00e8mes","ror":"https://ror.org/00t3fpp34","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I198244214","https://openalex.org/I203339264","https://openalex.org/I205703379","https://openalex.org/I3019848993","https://openalex.org/I4210099416","https://openalex.org/I4210123221","https://openalex.org/I4210159245","https://openalex.org/I4387154249"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Eric Dugat-Bony","raw_affiliation_strings":["1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088547933","display_name":"Mohieddine Missaoui","orcid":"https://orcid.org/0000-0003-2126-6898"},"institutions":[{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I4210099416","display_name":"Laboratoire d'Informatique, de Mod\u00e9lisation et d'Optimisation des Syst\u00e8mes","ror":"https://ror.org/00t3fpp34","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I198244214","https://openalex.org/I203339264","https://openalex.org/I205703379","https://openalex.org/I3019848993","https://openalex.org/I4210099416","https://openalex.org/I4210123221","https://openalex.org/I4210159245","https://openalex.org/I4387154249"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Mohieddine Missaoui","raw_affiliation_strings":["1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111538384","display_name":"Eric Peyretaillade","orcid":null},"institutions":[{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I4210099416","display_name":"Laboratoire d'Informatique, de Mod\u00e9lisation et d'Optimisation des Syst\u00e8mes","ror":"https://ror.org/00t3fpp34","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I198244214","https://openalex.org/I203339264","https://openalex.org/I205703379","https://openalex.org/I3019848993","https://openalex.org/I4210099416","https://openalex.org/I4210123221","https://openalex.org/I4210159245","https://openalex.org/I4387154249"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Eric Peyretaillade","raw_affiliation_strings":["1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008883700","display_name":"Corinne Biderre\u2010Petit","orcid":"https://orcid.org/0000-0001-7962-4171"},"institutions":[{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I4210099416","display_name":"Laboratoire d'Informatique, de Mod\u00e9lisation et d'Optimisation des Syst\u00e8mes","ror":"https://ror.org/00t3fpp34","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I198244214","https://openalex.org/I203339264","https://openalex.org/I205703379","https://openalex.org/I3019848993","https://openalex.org/I4210099416","https://openalex.org/I4210123221","https://openalex.org/I4210159245","https://openalex.org/I4387154249"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Corinne Biderre-Petit","raw_affiliation_strings":["1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072574370","display_name":"Ourdia Bouzid","orcid":null},"institutions":[{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I4210099416","display_name":"Laboratoire d'Informatique, de Mod\u00e9lisation et d'Optimisation des Syst\u00e8mes","ror":"https://ror.org/00t3fpp34","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I198244214","https://openalex.org/I203339264","https://openalex.org/I205703379","https://openalex.org/I3019848993","https://openalex.org/I4210099416","https://openalex.org/I4210123221","https://openalex.org/I4210159245","https://openalex.org/I4387154249"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ourdia Bouzid","raw_affiliation_strings":["1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061007836","display_name":"Christophe Gouinaud","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I4210099416","display_name":"Laboratoire d'Informatique, de Mod\u00e9lisation et d'Optimisation des Syst\u00e8mes","ror":"https://ror.org/00t3fpp34","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I198244214","https://openalex.org/I203339264","https://openalex.org/I205703379","https://openalex.org/I3019848993","https://openalex.org/I4210099416","https://openalex.org/I4210123221","https://openalex.org/I4210159245","https://openalex.org/I4387154249"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Christophe Gouinaud","raw_affiliation_strings":["1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113497930","display_name":"David R. Hill","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210099416","display_name":"Laboratoire d'Informatique, de Mod\u00e9lisation et d'Optimisation des Syst\u00e8mes","ror":"https://ror.org/00t3fpp34","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I198244214","https://openalex.org/I203339264","https://openalex.org/I205703379","https://openalex.org/I3019848993","https://openalex.org/I4210099416","https://openalex.org/I4210123221","https://openalex.org/I4210159245","https://openalex.org/I4387154249"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"David Hill","raw_affiliation_strings":["1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002447097","display_name":"Pierre Peyret","orcid":"https://orcid.org/0000-0003-3114-0586"},"institutions":[{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I4210099416","display_name":"Laboratoire d'Informatique, de Mod\u00e9lisation et d'Optimisation des Syst\u00e8mes","ror":"https://ror.org/00t3fpp34","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I198244214","https://openalex.org/I203339264","https://openalex.org/I205703379","https://openalex.org/I3019848993","https://openalex.org/I4210099416","https://openalex.org/I4210123221","https://openalex.org/I4210159245","https://openalex.org/I4387154249"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Peyret","raw_affiliation_strings":["1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, 2UMR CNRS 6023, Universit\u00e9 Blaise Pascal, 63000 Clermont-Ferrand, 3Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, LIMOS, BP 10448, F-63000 Clermont-Ferrand, 4UMR CNRS 6158, LIMOS, F-63173 Aubi\u00e8re and 5Clermont Universit\u00e9, Universit\u00e9 d'Auvergne, Laboratoire Microorganismes: G\u00e9nome et Environnement, BP 10448, F63000, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5062798672"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210099416","https://openalex.org/I4210122170","https://openalex.org/I4210143836"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.8676,"has_fulltext":true,"cited_by_count":30,"citation_normalized_percentile":{"value":0.85478891,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"27","issue":"5","first_page":"641","last_page":"648"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.8154144287109375},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5246265530586243},{"id":"https://openalex.org/keywords/microarray","display_name":"Microarray","score":0.43862199783325195},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.39052942395210266},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.37237972021102905},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3304266929626465},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2139771282672882},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.11741778254508972}],"concepts":[{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.8154144287109375},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5246265530586243},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.43862199783325195},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.39052942395210266},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.37237972021102905},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3304266929626465},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2139771282672882},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.11741778254508972}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001673","descriptor_name":"Biodegradation, Environmental","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001673","descriptor_name":"Biodegradation, Environmental","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001673","descriptor_name":"Biodegradation, Environmental","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004784","descriptor_name":"Environmental Monitoring","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004784","descriptor_name":"Environmental Monitoring","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004784","descriptor_name":"Environmental Monitoring","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015345","descriptor_name":"Oligonucleotide Probes","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D015345","descriptor_name":"Oligonucleotide Probes","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D015345","descriptor_name":"Oligonucleotide Probes","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D016384","descriptor_name":"Consensus Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016384","descriptor_name":"Consensus Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016384","descriptor_name":"Consensus Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btq712","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq712","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/5/641/16902110/btq712.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21216777","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21216777","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-00842882v1","is_oa":true,"landing_page_url":"https://hal.science/hal-00842882","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/","raw_type":"Journal articles"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq712","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq712","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/5/641/16902110/btq712.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.5600000023841858,"display_name":"Life in Land"}],"awards":[{"id":"https://openalex.org/G3514550006","display_name":null,"funder_award_id":"Centre","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G495392292","display_name":null,"funder_award_id":"FEDER","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320321662","display_name":"Agence de l'Environnement et de la Ma\u00eetrise de l'Energie","ror":"https://ror.org/05rth8x13"},{"id":"https://openalex.org/F4320322892","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2114154621.pdf","grobid_xml":"https://content.openalex.org/works/W2114154621.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W26308787","https://openalex.org/W145805655","https://openalex.org/W1967927148","https://openalex.org/W1980116568","https://openalex.org/W1988794341","https://openalex.org/W2012909940","https://openalex.org/W2014404933","https://openalex.org/W2026283092","https://openalex.org/W2035245651","https://openalex.org/W2035950846","https://openalex.org/W2046476040","https://openalex.org/W2055043387","https://openalex.org/W2059623429","https://openalex.org/W2097383747","https://openalex.org/W2102211317","https://openalex.org/W2104342875","https://openalex.org/W2105837518","https://openalex.org/W2106882534","https://openalex.org/W2108653662","https://openalex.org/W2114716657","https://openalex.org/W2116872861","https://openalex.org/W2118001436","https://openalex.org/W2124464500","https://openalex.org/W2129887186","https://openalex.org/W2130090205","https://openalex.org/W2130954747","https://openalex.org/W2131106071","https://openalex.org/W2131980582","https://openalex.org/W2139449455","https://openalex.org/W2139828607","https://openalex.org/W2143079030","https://openalex.org/W2145132040","https://openalex.org/W2152911741","https://openalex.org/W2154218487","https://openalex.org/W2166940906","https://openalex.org/W2169303987","https://openalex.org/W2170349982","https://openalex.org/W2799547495","https://openalex.org/W3146757543","https://openalex.org/W3149297358","https://openalex.org/W6606052223"],"related_works":["https://openalex.org/W2041540252","https://openalex.org/W2138580185","https://openalex.org/W2415545834","https://openalex.org/W3203113381","https://openalex.org/W2366558827","https://openalex.org/W170658859","https://openalex.org/W4232333928","https://openalex.org/W1594655861","https://openalex.org/W2089975163","https://openalex.org/W4233699124"],"abstract_inverted_index":{"http://fc.isima.fr/~g2im/hispod/.":[0]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
