{"id":"https://openalex.org/W2171267265","doi":"https://doi.org/10.1093/bioinformatics/btq261","title":"Structure-based variable selection for survival data","display_name":"Structure-based variable selection for survival data","publication_year":2010,"publication_date":"2010-06-02","ids":{"openalex":"https://openalex.org/W2171267265","doi":"https://doi.org/10.1093/bioinformatics/btq261","mag":"2171267265","pmid":"https://pubmed.ncbi.nlm.nih.gov/20519286"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq261","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq261","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/15/1887/48852398/bioinformatics_26_15_1887.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/15/1887/48852398/bioinformatics_26_15_1887.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016518691","display_name":"Vincenzo Lagani","orcid":"https://orcid.org/0000-0002-6552-6076"},"institutions":[{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]},{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Vincenzo Lagani","raw_affiliation_strings":["1 Institute of Computer Science, Foundation for Research and Technology \u2013 Hellas (FORTH) and 2Computer Science Department, University of Crete, Heraklion, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Computer Science, Foundation for Research and Technology \u2013 Hellas (FORTH) and 2Computer Science Department, University of Crete, Heraklion, Greece","institution_ids":["https://openalex.org/I8901234","https://openalex.org/I142617266"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070582381","display_name":"Ioannis Tsamardinos","orcid":"https://orcid.org/0000-0002-2492-959X"},"institutions":[{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]},{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Ioannis Tsamardinos","raw_affiliation_strings":["1 Institute of Computer Science, Foundation for Research and Technology \u2013 Hellas (FORTH) and 2Computer Science Department, University of Crete, Heraklion, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Computer Science, Foundation for Research and Technology \u2013 Hellas (FORTH) and 2Computer Science Department, University of Crete, Heraklion, Greece","institution_ids":["https://openalex.org/I8901234","https://openalex.org/I142617266"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5016518691"],"corresponding_institution_ids":["https://openalex.org/I142617266","https://openalex.org/I8901234"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.8671,"has_fulltext":true,"cited_by_count":28,"citation_normalized_percentile":{"value":0.88419576,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"26","issue":"15","first_page":"1887","last_page":"1894"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11303","display_name":"Bayesian Modeling and Causal Inference","score":0.8149999976158142,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11303","display_name":"Bayesian Modeling and Causal Inference","score":0.8149999976158142,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.09390000253915787,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12814","display_name":"Gaussian Processes and Bayesian Inference","score":0.011300000362098217,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.6431992650032043},{"id":"https://openalex.org/keywords/variable","display_name":"Variable (mathematics)","score":0.6353331208229065},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.58377605676651},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.4521139860153198},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.3521402180194855},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26864808797836304},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20065006613731384}],"concepts":[{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.6431992650032043},{"id":"https://openalex.org/C182365436","wikidata":"https://www.wikidata.org/wiki/Q50701","display_name":"Variable (mathematics)","level":2,"score":0.6353331208229065},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.58377605676651},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.4521139860153198},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.3521402180194855},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26864808797836304},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20065006613731384},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btq261","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq261","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/15/1887/48852398/bioinformatics_26_15_1887.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20519286","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20519286","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq261","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq261","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/15/1887/48852398/bioinformatics_26_15_1887.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6399999856948853,"display_name":"Peace, Justice and strong institutions","id":"https://metadata.un.org/sdg/16"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320885","display_name":"European Research Consortium for Informatics and Mathematics","ror":"https://ror.org/055zrhj18"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2171267265.pdf","grobid_xml":"https://content.openalex.org/works/W2171267265.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W149574399","https://openalex.org/W1498800329","https://openalex.org/W1511777662","https://openalex.org/W1524326598","https://openalex.org/W1580788756","https://openalex.org/W1608932033","https://openalex.org/W1976564639","https://openalex.org/W1986187671","https://openalex.org/W1986546598","https://openalex.org/W1991509879","https://openalex.org/W2000771269","https://openalex.org/W2012339972","https://openalex.org/W2016543729","https://openalex.org/W2017337590","https://openalex.org/W2018116321","https://openalex.org/W2031779765","https://openalex.org/W2031821463","https://openalex.org/W2032481853","https://openalex.org/W2036242721","https://openalex.org/W2044029817","https://openalex.org/W2047028564","https://openalex.org/W2070216889","https://openalex.org/W2087025987","https://openalex.org/W2112740000","https://openalex.org/W2116117029","https://openalex.org/W2121273346","https://openalex.org/W2123664981","https://openalex.org/W2123672572","https://openalex.org/W2128985829","https://openalex.org/W2133091666","https://openalex.org/W2138309709","https://openalex.org/W2143891888","https://openalex.org/W2146320559","https://openalex.org/W2149199519","https://openalex.org/W2149879453","https://openalex.org/W2152799677","https://openalex.org/W2159370862","https://openalex.org/W2160450758","https://openalex.org/W2160842550","https://openalex.org/W2165190832","https://openalex.org/W2612972698","https://openalex.org/W2911964244","https://openalex.org/W3122807153","https://openalex.org/W3133236490","https://openalex.org/W3147894994","https://openalex.org/W3175417087","https://openalex.org/W4214512856","https://openalex.org/W4234173777","https://openalex.org/W4299515571","https://openalex.org/W4302423442","https://openalex.org/W6606090912","https://openalex.org/W6630653298","https://openalex.org/W6667742432","https://openalex.org/W6677021098","https://openalex.org/W6678301611","https://openalex.org/W6682557032"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655"],"abstract_inverted_index":{"MOTIVATION:":[0],"Variable":[1],"selection":[2,32,129],"is":[3,19,50,84],"a":[4,27,79,111,151,167,177],"typical":[5],"approach":[6],"used":[7],"for":[8,30,34,72,131],"molecular-signature":[9],"and":[10,45,62,66,126,182],"biomarker":[11],"discovery;":[12],"however,":[13],"its":[14],"application":[15],"to":[16,97,137],"survival":[17,86,132],"data":[18,40,104,133],"often":[20],"complicated":[21],"by":[22,176],"censored":[23],"samples.":[24],"We":[25,118],"propose":[26],"new":[28],"algorithm":[29,49,70],"variable":[31,128,147],"suitable":[33],"the":[35,56,63,68,85,90,94,100,103,145,161,164],"analysis":[36,123],"of":[37,58,124,160,170],"high-dimensional,":[38],"right-censored":[39],"called":[41],"Survival":[42],"Max-Min":[43],"Parents":[44],"Children":[46],"(SMMPC).":[47],"The":[48,75,106],"conceptually":[51],"simple,":[52],"scalable,":[53],"based":[54],"on":[55,143],"theory":[57],"Bayesian":[59],"networks":[60],"(BNs)":[61],"Markov":[64],"blanket":[65],"extends":[67],"corresponding":[69],"(MMPC)":[71],"classification":[73],"tasks.":[74],"selected":[76,107],"variables":[77,95,108],"have":[78,110],"structural":[80],"interpretation:":[81],"if":[82],"T":[83,98],"time":[87],"(in":[88],"general":[89],"time-to-event),":[91],"SMMPC":[92,141],"returns":[93],"adjacent":[96],"in":[99,163],"BN":[101],"representing":[102],"distribution.":[105],"also":[109],"causal":[112],"interpretation":[113],"that":[114,134,172],"we":[115],"discuss.":[116],"RESULTS:":[117],"conduct":[119],"an":[120],"extensive":[121],"empirical":[122],"prototypical":[125],"state-of-the-art":[127],"algorithms":[130],"are":[135,185],"applicable":[136],"high-dimensional":[138],"biological":[139],"data.":[140],"selects":[142],"average":[144],"smallest":[146],"subsets":[148],"(less":[149],"than":[150],"dozen":[152],"per":[153],"dataset),":[154],"while":[155],"statistically":[156],"significantly":[157],"outperforming":[158],"all":[159],"methods":[162],"study":[165],"returning":[166],"manageable":[168],"number":[169],"genes":[171],"could":[173],"be":[174],"inspected":[175],"human":[178],"expert.":[179],"AVAILABILITY:":[180],"Matlab":[181],"R":[183],"code":[184],"freely":[186],"available":[187],"from":[188],"http://www.mensxmachina.org":[189]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
