{"id":"https://openalex.org/W2145009248","doi":"https://doi.org/10.1093/bioinformatics/btq086","title":"ScripTree: scripting phylogenetic graphics","display_name":"ScripTree: scripting phylogenetic graphics","publication_year":2010,"publication_date":"2010-03-01","ids":{"openalex":"https://openalex.org/W2145009248","doi":"https://doi.org/10.1093/bioinformatics/btq086","mag":"2145009248","pmid":"https://pubmed.ncbi.nlm.nih.gov/20194627"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq086","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq086","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/8/1125/48857077/bioinformatics_26_8_1125.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/8/1125/48857077/bioinformatics_26_8_1125.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076387774","display_name":"Fran\u00e7ois Chevenet","orcid":"https://orcid.org/0000-0003-2622-6596"},"institutions":[{"id":"https://openalex.org/I251321805","display_name":"Agropolis International","ror":"https://ror.org/00txxwv34","country_code":"FR","type":"other","lineage":["https://openalex.org/I251321805"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I4210101743","display_name":"Laboratoire d'Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier","ror":"https://ror.org/013yean28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I151295451","https://openalex.org/I19894307","https://openalex.org/I4210101743","https://openalex.org/I4210159245","https://openalex.org/I4412460525"]},{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Fran\u00e7ois Chevenet","raw_affiliation_strings":["1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France"],"affiliations":[{"raw_affiliation_string":"1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France","institution_ids":["https://openalex.org/I201841394","https://openalex.org/I251321805","https://openalex.org/I4210101743","https://openalex.org/I19894307","https://openalex.org/I4210166444","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075477225","display_name":"Olivier Croce","orcid":"https://orcid.org/0000-0002-7342-3157"},"institutions":[{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I251321805","display_name":"Agropolis International","ror":"https://ror.org/00txxwv34","country_code":"FR","type":"other","lineage":["https://openalex.org/I251321805"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210101743","display_name":"Laboratoire d'Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier","ror":"https://ror.org/013yean28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I151295451","https://openalex.org/I19894307","https://openalex.org/I4210101743","https://openalex.org/I4210159245","https://openalex.org/I4412460525"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier Croce","raw_affiliation_strings":["1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France"],"affiliations":[{"raw_affiliation_string":"1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France","institution_ids":["https://openalex.org/I201841394","https://openalex.org/I251321805","https://openalex.org/I4210101743","https://openalex.org/I19894307","https://openalex.org/I4210166444","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052284332","display_name":"Maxime Hebrard","orcid":"https://orcid.org/0000-0003-2346-4513"},"institutions":[{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210101743","display_name":"Laboratoire d'Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier","ror":"https://ror.org/013yean28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I151295451","https://openalex.org/I19894307","https://openalex.org/I4210101743","https://openalex.org/I4210159245","https://openalex.org/I4412460525"]},{"id":"https://openalex.org/I251321805","display_name":"Agropolis International","ror":"https://ror.org/00txxwv34","country_code":"FR","type":"other","lineage":["https://openalex.org/I251321805"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Maxime Hebrard","raw_affiliation_strings":["1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France"],"affiliations":[{"raw_affiliation_string":"1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France","institution_ids":["https://openalex.org/I201841394","https://openalex.org/I251321805","https://openalex.org/I4210101743","https://openalex.org/I19894307","https://openalex.org/I4210166444","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009594049","display_name":"Richard Christen","orcid":"https://orcid.org/0000-0002-3396-4362"},"institutions":[{"id":"https://openalex.org/I251321805","display_name":"Agropolis International","ror":"https://ror.org/00txxwv34","country_code":"FR","type":"other","lineage":["https://openalex.org/I251321805"]},{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]},{"id":"https://openalex.org/I4210101743","display_name":"Laboratoire d'Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier","ror":"https://ror.org/013yean28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I151295451","https://openalex.org/I19894307","https://openalex.org/I4210101743","https://openalex.org/I4210159245","https://openalex.org/I4412460525"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Richard Christen","raw_affiliation_strings":["1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France"],"affiliations":[{"raw_affiliation_string":"1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France","institution_ids":["https://openalex.org/I201841394","https://openalex.org/I251321805","https://openalex.org/I4210101743","https://openalex.org/I19894307","https://openalex.org/I4210166444","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058327913","display_name":"Vincent Berry","orcid":"https://orcid.org/0000-0001-7271-4027"},"institutions":[{"id":"https://openalex.org/I251321805","display_name":"Agropolis International","ror":"https://ror.org/00txxwv34","country_code":"FR","type":"other","lineage":["https://openalex.org/I251321805"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]},{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I4210101743","display_name":"Laboratoire d'Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier","ror":"https://ror.org/013yean28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I151295451","https://openalex.org/I19894307","https://openalex.org/I4210101743","https://openalex.org/I4210159245","https://openalex.org/I4412460525"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Vincent Berry","raw_affiliation_strings":["1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France"],"affiliations":[{"raw_affiliation_string":"1 GEMI, IRD/CNRS UMR 2724, 911 avenue Agropolis, 34394 Montpellier, 2 MAB, LIRMM, CNRS, Universit\u00e9 Montpellier, 161, rue Ada, 34392 Montpellier and 3 CNRS UMR 6543 and Universit\u00e9 Nice, Centre de Biochimie. Parc Valrose. 06108 Nice, France","institution_ids":["https://openalex.org/I201841394","https://openalex.org/I251321805","https://openalex.org/I4210101743","https://openalex.org/I19894307","https://openalex.org/I4210166444","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5076387774"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I19894307","https://openalex.org/I201841394","https://openalex.org/I251321805","https://openalex.org/I4210101743","https://openalex.org/I4210166444"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.0574,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.76061885,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"26","issue":"8","first_page":"1125","last_page":"1126"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11354","display_name":"Evolution and Paleontology Studies","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10487","display_name":"Plant and animal studies","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8026238679885864},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.7413954734802246},{"id":"https://openalex.org/keywords/rendering","display_name":"Rendering (computer graphics)","score":0.6541185975074768},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.5708657503128052},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.4724567234516144},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.44970980286598206},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.4315371513366699},{"id":"https://openalex.org/keywords/unix","display_name":"Unix","score":0.42477312684059143},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.4157969355583191},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.38347285985946655},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.3624873161315918},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.2533636689186096},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10425147414207458}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8026238679885864},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.7413954734802246},{"id":"https://openalex.org/C205711294","wikidata":"https://www.wikidata.org/wiki/Q176953","display_name":"Rendering (computer graphics)","level":2,"score":0.6541185975074768},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5708657503128052},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.4724567234516144},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.44970980286598206},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.4315371513366699},{"id":"https://openalex.org/C112968700","wikidata":"https://www.wikidata.org/wiki/Q11368","display_name":"Unix","level":3,"score":0.42477312684059143},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.4157969355583191},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.38347285985946655},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.3624873161315918},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.2533636689186096},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10425147414207458},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btq086","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq086","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/8/1125/48857077/bioinformatics_26_8_1125.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20194627","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20194627","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-00497209v1","is_oa":false,"landing_page_url":"https://hal.science/hal-00497209","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2010, 26 (8), pp.1125-1126. ⟨10.1093/bioinformatics/btq086⟩","raw_type":"Journal articles"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq086","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq086","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/8/1125/48857077/bioinformatics_26_8_1125.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2145009248.pdf","grobid_xml":"https://content.openalex.org/works/W2145009248.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1521650410","https://openalex.org/W1993038297","https://openalex.org/W2004798786","https://openalex.org/W2023858176","https://openalex.org/W2028265997","https://openalex.org/W2074494141","https://openalex.org/W2078151980","https://openalex.org/W2086029509","https://openalex.org/W2101829413","https://openalex.org/W2149057166","https://openalex.org/W2151409320","https://openalex.org/W4255938757"],"related_works":["https://openalex.org/W2033889310","https://openalex.org/W644889988","https://openalex.org/W2086577855","https://openalex.org/W1575418055","https://openalex.org/W189459719","https://openalex.org/W1564198055","https://openalex.org/W2105855614","https://openalex.org/W2119018183","https://openalex.org/W2951541096","https://openalex.org/W2790902885"],"abstract_inverted_index":{"ScripTree,":[0],"written":[1],"in":[2,28],"Tcl/Tk,":[3],"is":[4],"a":[5,23,29,35],"cross-platform":[6],"application":[7],"available":[8],"for":[9],"Windows":[10],"and":[11,32],"Unix-like":[12],"systems":[13],"including":[14],"OS":[15],"X.":[16],"It":[17],"can":[18],"be":[19],"used":[20],"either":[21],"as":[22],"stand-alone":[24],"package":[25],"or":[26],"included":[27],"bioinformatic":[30],"pipeline":[31],"linked":[33],"to":[34],"HTTP":[36],"server.":[37]},"counts_by_year":[{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":5}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}