{"id":"https://openalex.org/W2099907934","doi":"https://doi.org/10.1093/bioinformatics/btp447","title":"FRODOCK: a new approach for fast rotational protein\u2013protein docking","display_name":"FRODOCK: a new approach for fast rotational protein\u2013protein docking","publication_year":2009,"publication_date":"2009-07-20","ids":{"openalex":"https://openalex.org/W2099907934","doi":"https://doi.org/10.1093/bioinformatics/btp447","mag":"2099907934","pmid":"https://pubmed.ncbi.nlm.nih.gov/19620099"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp447","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp447","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/19/2544/48994194/bioinformatics_25_19_2544.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/19/2544/48994194/bioinformatics_25_19_2544.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005566175","display_name":"Jos\u00e9 Ignacio Garz\u00f3n","orcid":null},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I4210147680","display_name":"Centro de Investigaciones Biol\u00f3gicas Margarita Salas","ror":"https://ror.org/04advdf21","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210147680"]},{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"funder","lineage":["https://openalex.org/I134820265"]},{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]}],"countries":["ES","US"],"is_corresponding":true,"raw_author_name":"Jos\u00e9 Ignacio Garzon","raw_affiliation_strings":["1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA"],"affiliations":[{"raw_affiliation_string":"1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA","institution_ids":["https://openalex.org/I4210147680","https://openalex.org/I2799803557","https://openalex.org/I134820265","https://openalex.org/I9617848","https://openalex.org/I123431417"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061629048","display_name":"Jos\u00e9 Ram\u00f3n L\u00f3pez\u2010Blanco","orcid":"https://orcid.org/0000-0002-5891-4134"},"institutions":[{"id":"https://openalex.org/I4210147680","display_name":"Centro de Investigaciones Biol\u00f3gicas Margarita Salas","ror":"https://ror.org/04advdf21","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210147680"]},{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"funder","lineage":["https://openalex.org/I134820265"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]}],"countries":["ES","US"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 Ram\u00f3n Lop\u00e9z-Blanco","raw_affiliation_strings":["1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA"],"affiliations":[{"raw_affiliation_string":"1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA","institution_ids":["https://openalex.org/I4210147680","https://openalex.org/I2799803557","https://openalex.org/I134820265","https://openalex.org/I9617848","https://openalex.org/I123431417"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087135746","display_name":"Carles Pons","orcid":"https://orcid.org/0000-0002-9131-9089"},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I4210147680","display_name":"Centro de Investigaciones Biol\u00f3gicas Margarita Salas","ror":"https://ror.org/04advdf21","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210147680"]},{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"funder","lineage":["https://openalex.org/I134820265"]}],"countries":["ES","US"],"is_corresponding":false,"raw_author_name":"Carles Pons","raw_affiliation_strings":["1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA"],"affiliations":[{"raw_affiliation_string":"1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA","institution_ids":["https://openalex.org/I4210147680","https://openalex.org/I2799803557","https://openalex.org/I134820265","https://openalex.org/I9617848","https://openalex.org/I123431417"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068517610","display_name":"Julio Kovacs","orcid":"https://orcid.org/0000-0002-1829-7119"},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"funder","lineage":["https://openalex.org/I134820265"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I4210147680","display_name":"Centro de Investigaciones Biol\u00f3gicas Margarita Salas","ror":"https://ror.org/04advdf21","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210147680"]},{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]}],"countries":["ES","US"],"is_corresponding":false,"raw_author_name":"Julio Kovacs","raw_affiliation_strings":["1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA"],"affiliations":[{"raw_affiliation_string":"1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA","institution_ids":["https://openalex.org/I4210147680","https://openalex.org/I2799803557","https://openalex.org/I134820265","https://openalex.org/I9617848","https://openalex.org/I123431417"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064101943","display_name":"Ruben Abagyan","orcid":"https://orcid.org/0000-0001-9309-2976"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I4210147680","display_name":"Centro de Investigaciones Biol\u00f3gicas Margarita Salas","ror":"https://ror.org/04advdf21","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210147680"]},{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"funder","lineage":["https://openalex.org/I134820265"]}],"countries":["ES","US"],"is_corresponding":false,"raw_author_name":"Ruben Abagyan","raw_affiliation_strings":["1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA"],"affiliations":[{"raw_affiliation_string":"1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA","institution_ids":["https://openalex.org/I4210147680","https://openalex.org/I2799803557","https://openalex.org/I134820265","https://openalex.org/I9617848","https://openalex.org/I123431417"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021117369","display_name":"Juan Fern\u00e1ndez\u2010Recio","orcid":"https://orcid.org/0000-0002-3986-7686"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"funder","lineage":["https://openalex.org/I134820265"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I4210147680","display_name":"Centro de Investigaciones Biol\u00f3gicas Margarita Salas","ror":"https://ror.org/04advdf21","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210147680"]},{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]}],"countries":["ES","US"],"is_corresponding":false,"raw_author_name":"Juan Fernandez-Recio","raw_affiliation_strings":["1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA"],"affiliations":[{"raw_affiliation_string":"1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA","institution_ids":["https://openalex.org/I4210147680","https://openalex.org/I2799803557","https://openalex.org/I134820265","https://openalex.org/I9617848","https://openalex.org/I123431417"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016204870","display_name":"Pablo Chac\u00f3n","orcid":"https://orcid.org/0000-0002-3168-4826"},"institutions":[{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"funder","lineage":["https://openalex.org/I134820265"]},{"id":"https://openalex.org/I4210147680","display_name":"Centro de Investigaciones Biol\u00f3gicas Margarita Salas","ror":"https://ror.org/04advdf21","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210147680"]}],"countries":["ES","US"],"is_corresponding":false,"raw_author_name":"Pablo Chacon","raw_affiliation_strings":["1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA"],"affiliations":[{"raw_affiliation_string":"1 Centro de Investigaciones Biol\u00f3gicas, CSIC, Ramiro de Maeztu, 9. 28040 Madrid, Spain, 2Barcelona Supercomputing Center, 3National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 29, Barcelona 08034, Spain and 4Department of Molecular Biology, The Scripps Research Institute La Jolla, CA 92037, USA","institution_ids":["https://openalex.org/I4210147680","https://openalex.org/I2799803557","https://openalex.org/I134820265","https://openalex.org/I9617848","https://openalex.org/I123431417"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5005566175"],"corresponding_institution_ids":["https://openalex.org/I123431417","https://openalex.org/I134820265","https://openalex.org/I2799803557","https://openalex.org/I4210147680","https://openalex.org/I9617848"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.5611,"has_fulltext":true,"cited_by_count":158,"citation_normalized_percentile":{"value":0.89662357,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"25","issue":"19","first_page":"2544","last_page":"2551"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.6716834306716919},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6570720672607422},{"id":"https://openalex.org/keywords/maxima-and-minima","display_name":"Maxima and minima","score":0.6430881023406982},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.640977144241333},{"id":"https://openalex.org/keywords/macromolecular-docking","display_name":"Macromolecular docking","score":0.5885935425758362},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.5323033332824707},{"id":"https://openalex.org/keywords/van-der-waals-force","display_name":"van der Waals force","score":0.4885004758834839},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.43327975273132324},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4193588197231293},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.33274394273757935},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.28999435901641846},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.2391483187675476},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.17322003841400146},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.16580235958099365},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1316203474998474},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.1035841703414917}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.6716834306716919},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6570720672607422},{"id":"https://openalex.org/C186633575","wikidata":"https://www.wikidata.org/wiki/Q845060","display_name":"Maxima and minima","level":2,"score":0.6430881023406982},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.640977144241333},{"id":"https://openalex.org/C116887118","wikidata":"https://www.wikidata.org/wiki/Q836685","display_name":"Macromolecular docking","level":3,"score":0.5885935425758362},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.5323033332824707},{"id":"https://openalex.org/C126061179","wikidata":"https://www.wikidata.org/wiki/Q189627","display_name":"van der Waals force","level":3,"score":0.4885004758834839},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.43327975273132324},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4193588197231293},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.33274394273757935},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.28999435901641846},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.2391483187675476},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.17322003841400146},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.16580235958099365},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1316203474998474},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.1035841703414917},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btp447","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp447","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/19/2544/48994194/bioinformatics_25_19_2544.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19620099","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19620099","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:1899740","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2800348","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp447","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp447","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/19/2544/48994194/bioinformatics_25_19_2544.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Affordable and clean energy","score":0.6600000262260437,"id":"https://metadata.un.org/sdg/7"}],"awards":[{"id":"https://openalex.org/G2435182352","display_name":null,"funder_award_id":"R.A.)","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2687174116","display_name":null,"funder_award_id":"R01-GM071872","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3956400982","display_name":null,"funder_award_id":"GM071872","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2099907934.pdf","grobid_xml":"https://content.openalex.org/works/W2099907934.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W198093230","https://openalex.org/W1965499191","https://openalex.org/W1968922152","https://openalex.org/W1983851480","https://openalex.org/W1985481261","https://openalex.org/W1997638778","https://openalex.org/W2000383223","https://openalex.org/W2007517854","https://openalex.org/W2008679330","https://openalex.org/W2014744153","https://openalex.org/W2016385245","https://openalex.org/W2018410079","https://openalex.org/W2027638447","https://openalex.org/W2048643046","https://openalex.org/W2049972706","https://openalex.org/W2057558301","https://openalex.org/W2074104861","https://openalex.org/W2078688023","https://openalex.org/W2095157453","https://openalex.org/W2097031841","https://openalex.org/W2105438341","https://openalex.org/W2110585060","https://openalex.org/W2112087820","https://openalex.org/W2129414710","https://openalex.org/W2129454543","https://openalex.org/W2133712572","https://openalex.org/W2145793759","https://openalex.org/W2151460035","https://openalex.org/W2153731681","https://openalex.org/W2157991822","https://openalex.org/W2158957977","https://openalex.org/W2160223767","https://openalex.org/W2160868144","https://openalex.org/W2162502996","https://openalex.org/W2171249995","https://openalex.org/W4254093784"],"related_works":["https://openalex.org/W2996908194","https://openalex.org/W2585040066","https://openalex.org/W2162380182","https://openalex.org/W3187431608","https://openalex.org/W3005126098","https://openalex.org/W2157273785","https://openalex.org/W2064383522","https://openalex.org/W2942988621","https://openalex.org/W3011103292","https://openalex.org/W2583520705"],"abstract_inverted_index":{"http://sbg.cib.csic.es/Software/FRODOCK/":[0]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":16},{"year":2019,"cited_by_count":13},{"year":2018,"cited_by_count":13},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":12},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":8}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
