{"id":"https://openalex.org/W2127219350","doi":"https://doi.org/10.1093/bioinformatics/btp170","title":"SBML2L<scp>a</scp>TEX: Conversion of SBML files into human-readable reports","display_name":"SBML2L<scp>a</scp>TEX: Conversion of SBML files into human-readable reports","publication_year":2009,"publication_date":"2009-03-23","ids":{"openalex":"https://openalex.org/W2127219350","doi":"https://doi.org/10.1093/bioinformatics/btp170","mag":"2127219350","pmid":"https://pubmed.ncbi.nlm.nih.gov/19307240"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp170","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp170","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/11/1455/48987591/bioinformatics_25_11_1455.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/11/1455/48987591/bioinformatics_25_11_1455.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065854572","display_name":"Andreas Dr\u00e4ger","orcid":"https://orcid.org/0000-0002-1240-5553"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]}],"countries":["DE","GB"],"is_corresponding":true,"raw_author_name":"Andreas Dr\u00e4ger","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004102781","display_name":"Hannes Planatscher","orcid":"https://orcid.org/0000-0002-6536-0782"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Hannes Planatscher","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023513368","display_name":"Dieudonn\u00e9 Motsou Wouamba","orcid":null},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Dieudonn\u00e9 Motsou Wouamba","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102110109","display_name":"Adrian Schr\u00f6der","orcid":"https://orcid.org/0009-0009-1033-9351"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Adrian Schr\u00f6der","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016716446","display_name":"Michael Hucka","orcid":"https://orcid.org/0000-0001-9105-5960"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Michael Hucka","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007280434","display_name":"Lukas Endler","orcid":"https://orcid.org/0000-0002-9115-8756"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Lukas Endler","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028677591","display_name":"Martin Golebiewski","orcid":"https://orcid.org/0000-0002-8683-7084"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Martin Golebiewski","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060937863","display_name":"Wolfgang G. M\u00fcller","orcid":"https://orcid.org/0000-0002-4980-3512"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Wolfgang M\u00fcller","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004958444","display_name":"Andreas Zell","orcid":"https://orcid.org/0000-0003-3299-2211"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"funder","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Andreas Zell","raw_affiliation_strings":["1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5065854572"],"corresponding_institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I8087733","https://openalex.org/I87048295"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.9407,"has_fulltext":false,"cited_by_count":30,"citation_normalized_percentile":{"value":0.74660789,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"25","issue":"11","first_page":"1455","last_page":"1456"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sbml","display_name":"SBML","score":0.9833745360374451},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.8197275400161743},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8119778633117676},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.6205751299858093},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.5525243878364563},{"id":"https://openalex.org/keywords/personalization","display_name":"Personalization","score":0.5039212107658386},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.49587783217430115},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.47674286365509033},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4525812864303589},{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.41322994232177734},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3449288010597229},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.32931965589523315}],"concepts":[{"id":"https://openalex.org/C87186988","wikidata":"https://www.wikidata.org/wiki/Q452197","display_name":"SBML","level":4,"score":0.9833745360374451},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.8197275400161743},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8119778633117676},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.6205751299858093},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.5525243878364563},{"id":"https://openalex.org/C183003079","wikidata":"https://www.wikidata.org/wiki/Q1000371","display_name":"Personalization","level":2,"score":0.5039212107658386},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.49587783217430115},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.47674286365509033},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4525812864303589},{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.41322994232177734},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3449288010597229},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.32931965589523315}],"mesh":[{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btp170","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp170","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/11/1455/48987591/bioinformatics_25_11_1455.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19307240","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19307240","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:authors.library.caltech.edu:15225","is_oa":false,"landing_page_url":"https://resolver.caltech.edu/CaltechAUTHORS:20090821-103810499","pdf_url":null,"source":{"id":"https://openalex.org/S4306402161","display_name":"CaltechAUTHORS (California Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I122411786","host_organization_name":"California Institute of Technology","host_organization_lineage":["https://openalex.org/I122411786"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.610.3074","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.610.3074","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2009/03/23/bioinformatics.btp170.full.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:1440804","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC2682517","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:2682517","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2682517","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp170","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp170","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/11/1455/48987591/bioinformatics_25_11_1455.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8500000238418579,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2127219350.pdf","grobid_xml":"https://content.openalex.org/works/W2127219350.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W1806297117","https://openalex.org/W2020561965","https://openalex.org/W2034463423","https://openalex.org/W2107062718","https://openalex.org/W2117364474","https://openalex.org/W2134221731","https://openalex.org/W2150908245","https://openalex.org/W3215028400","https://openalex.org/W6637986004"],"related_works":["https://openalex.org/W2082621456","https://openalex.org/W2150908245","https://openalex.org/W2981332207","https://openalex.org/W2211443823","https://openalex.org/W2100525485","https://openalex.org/W2040642413","https://openalex.org/W3048335229","https://openalex.org/W2146744007","https://openalex.org/W1546010648","https://openalex.org/W2890725831"],"abstract_inverted_index":{"Source":[0],"code,":[1],"documentation":[2],"and":[3],"a":[4],"web":[5],"service":[6],"are":[7],"freely":[8],"available":[9],"at":[10],"(http://www.ra.cs.uni-tuebingen.de/software/SBML2LaTeX).":[11]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2016-06-24T00:00:00"}
