{"id":"https://openalex.org/W2124135641","doi":"https://doi.org/10.1093/bioinformatics/btp110","title":"A robust peak detection method for RNA structure inference by high-throughput contact mapping","display_name":"A robust peak detection method for RNA structure inference by high-throughput contact mapping","publication_year":2009,"publication_date":"2009-02-26","ids":{"openalex":"https://openalex.org/W2124135641","doi":"https://doi.org/10.1093/bioinformatics/btp110","mag":"2124135641","pmid":"https://pubmed.ncbi.nlm.nih.gov/19246511"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp110","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp110","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/9/1137/527900/btp110.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/9/1137/527900/btp110.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061842716","display_name":"Jinkyu Kim","orcid":"https://orcid.org/0000-0001-6520-2074"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]},{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR","US"],"is_corresponding":true,"raw_author_name":"Jinkyu Kim","raw_affiliation_strings":["1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I67900169","https://openalex.org/I97018004","https://openalex.org/I197347611","https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036671957","display_name":"Seunghak Yu","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]},{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]},{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Seunghak Yu","raw_affiliation_strings":["1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I67900169","https://openalex.org/I97018004","https://openalex.org/I197347611","https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076075267","display_name":"Byonghyo Shim","orcid":"https://orcid.org/0000-0001-5051-1763"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]},{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Byonghyo Shim","raw_affiliation_strings":["1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I67900169","https://openalex.org/I97018004","https://openalex.org/I197347611","https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056591946","display_name":"Hanjoo Kim","orcid":"https://orcid.org/0000-0001-6891-2733"},"institutions":[{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]},{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Hanjoo Kim","raw_affiliation_strings":["1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I67900169","https://openalex.org/I97018004","https://openalex.org/I197347611","https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101764096","display_name":"Hyeyoung Min","orcid":"https://orcid.org/0000-0002-7964-2924"},"institutions":[{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]},{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Hyeyoung Min","raw_affiliation_strings":["1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I67900169","https://openalex.org/I97018004","https://openalex.org/I197347611","https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084016800","display_name":"Eui-Young Chung","orcid":"https://orcid.org/0000-0003-2013-8763"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]},{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]},{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Eui-Young Chung","raw_affiliation_strings":["1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I67900169","https://openalex.org/I97018004","https://openalex.org/I197347611","https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071548009","display_name":"Rhiju Das","orcid":"https://orcid.org/0000-0001-7497-0972"},"institutions":[{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]},{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Rhiju Das","raw_affiliation_strings":["1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I67900169","https://openalex.org/I97018004","https://openalex.org/I197347611","https://openalex.org/I193775966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086877012","display_name":"Sungroh Yoon","orcid":"https://orcid.org/0000-0002-2367-197X"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]},{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Sungroh Yoon","raw_affiliation_strings":["1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 School of Electrical Engineering, 2Department of Computer Science, Korea University, Seoul 136-713, Korea, 3College of Pharmacy, Chung-Ang University, Seoul 156-756, Korea, 4Department of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749, Korea and 5Departments of Biochemistry and Physics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I67900169","https://openalex.org/I97018004","https://openalex.org/I197347611","https://openalex.org/I193775966"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5061842716"],"corresponding_institution_ids":["https://openalex.org/I193775966","https://openalex.org/I197347611","https://openalex.org/I67900169","https://openalex.org/I97018004"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.6739,"has_fulltext":false,"cited_by_count":19,"citation_normalized_percentile":{"value":0.6999852,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"25","issue":"9","first_page":"1137","last_page":"1144"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6416640281677246},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5720334649085999},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5602216124534607},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.4648859202861786},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.4598759710788727},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.43724897503852844},{"id":"https://openalex.org/keywords/measure","display_name":"Measure (data warehouse)","score":0.4267769455909729},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.41066303849220276},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.36817651987075806},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3003057837486267},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.24656009674072266}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6416640281677246},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5720334649085999},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5602216124534607},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.4648859202861786},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.4598759710788727},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.43724897503852844},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.4267769455909729},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.41066303849220276},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.36817651987075806},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3003057837486267},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24656009674072266},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btp110","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp110","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/9/1137/527900/btp110.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19246511","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19246511","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.331.265","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.331.265","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.stanford.edu/~rhiju/Kim_etal_Bioinformatics2009.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.832.2189","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.832.2189","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2009/02/26/bioinformatics.btp110.full.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp110","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp110","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/9/1137/527900/btp110.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2124135641.pdf","grobid_xml":"https://content.openalex.org/works/W2124135641.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W116183427","https://openalex.org/W123426918","https://openalex.org/W1525535255","https://openalex.org/W1570448133","https://openalex.org/W1574901103","https://openalex.org/W1663973292","https://openalex.org/W1766888123","https://openalex.org/W2009086942","https://openalex.org/W2017838368","https://openalex.org/W2153635508","https://openalex.org/W2160697532","https://openalex.org/W2163728515","https://openalex.org/W2168130065","https://openalex.org/W2213225404","https://openalex.org/W2798766386","https://openalex.org/W2966207845","https://openalex.org/W3120421331","https://openalex.org/W4206180546","https://openalex.org/W4242209908"],"related_works":["https://openalex.org/W4255837520","https://openalex.org/W2387011115","https://openalex.org/W2136583354","https://openalex.org/W2111238207","https://openalex.org/W4234808182","https://openalex.org/W2055243143","https://openalex.org/W4255628145","https://openalex.org/W2382043075","https://openalex.org/W2809151339","https://openalex.org/W2216913934"],"abstract_inverted_index":{"The":[0],"software":[1],"and":[2],"supplementary":[3],"data":[4],"are":[5],"available":[6],"at":[7],"http://dna.korea.ac.kr/pub/mohca.":[8]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
