{"id":"https://openalex.org/W2144264688","doi":"https://doi.org/10.1093/bioinformatics/btp061","title":"Systems biology metabolic modeling assistant: an ontology-based tool for the integration of metabolic data in kinetic modeling","display_name":"Systems biology metabolic modeling assistant: an ontology-based tool for the integration of metabolic data in kinetic modeling","publication_year":2009,"publication_date":"2009-02-02","ids":{"openalex":"https://openalex.org/W2144264688","doi":"https://doi.org/10.1093/bioinformatics/btp061","mag":"2144264688","pmid":"https://pubmed.ncbi.nlm.nih.gov/19189977"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp061","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/6/834/700232/btp061.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/6/834/700232/btp061.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014168931","display_name":"Armando Reyes\u2010Palomares","orcid":"https://orcid.org/0000-0002-0289-6889"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Armando Reyes-Palomares","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067020884","display_name":"Ra\u00fal Monta\u00f1ez","orcid":"https://orcid.org/0000-0003-1667-2218"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Raul Monta\u00f1ez","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034568634","display_name":"Alejando Real-Chicharro","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alejando Real-Chicharro","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085719521","display_name":"Othmane Chniber","orcid":null},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Othmane Chniber","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026734910","display_name":"Amine Kerzazi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Amine Kerzazi","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038234325","display_name":"Ismael Navas\u2010Delgado","orcid":"https://orcid.org/0000-0001-7819-5416"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ismael Navas-Delgado","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033418778","display_name":"Miguel \u00c1ngel Medina","orcid":"https://orcid.org/0000-0001-7275-6462"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Miguel \u00c1ngel Medina","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009495520","display_name":"Jos\u00e9 F. Aldana\u2010Montes","orcid":"https://orcid.org/0000-0002-2673-9474"},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 F. Aldana-Montes","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089157845","display_name":"Francisca S\u00e1nchez\u2010Jim\u00e9nez","orcid":"https://orcid.org/0000-0002-4958-6060"},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Francisca S\u00e1nchez-Jim\u00e9nez","raw_affiliation_strings":["1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain"],"affiliations":[{"raw_affiliation_string":"1 Department of Molecular Biology and Biochemistry and unit 741 of CIBER \u2018de Enfermedades Raras\u2019 and 2Department of Computer Languages and Computational Sciences, Campus de Teatinos, Universityof Malaga, 29071, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5014168931"],"corresponding_institution_ids":["https://openalex.org/I4210115082","https://openalex.org/I82767444"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.8872,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.85553109,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"25","issue":"6","first_page":"834","last_page":"835"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6828635334968567},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.681984543800354},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5680508017539978},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5218783020973206},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.4534268081188202},{"id":"https://openalex.org/keywords/metabolic-activity","display_name":"Metabolic activity","score":0.4529128074645996},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.44323277473449707},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.4334821105003357},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3070864677429199},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.30483534932136536},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15621864795684814},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13458073139190674},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09676915407180786},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.09310004115104675}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6828635334968567},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.681984543800354},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5680508017539978},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5218783020973206},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.4534268081188202},{"id":"https://openalex.org/C2993927895","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolic activity","level":2,"score":0.4529128074645996},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.44323277473449707},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.4334821105003357},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3070864677429199},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.30483534932136536},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15621864795684814},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13458073139190674},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09676915407180786},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.09310004115104675},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btp061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp061","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/6/834/700232/btp061.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19189977","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19189977","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp061","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/6/834/700232/btp061.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4715792684","display_name":null,"funder_award_id":"CIBER","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G5328853702","display_name":null,"funder_award_id":"BIO-267","funder_id":"https://openalex.org/F4320310214","funder_display_name":"Fundaci\u00f3n Ram\u00f3n Areces"},{"id":"https://openalex.org/G5916997013","display_name":null,"funder_award_id":"BIO-267","funder_id":"https://openalex.org/F4320326754","funder_display_name":"Junta de Andaluc\u00eda"}],"funders":[{"id":"https://openalex.org/F4320310214","display_name":"Fundaci\u00f3n Ram\u00f3n Areces","ror":"https://ror.org/04ra91131"},{"id":"https://openalex.org/F4320326754","display_name":"Junta de Andaluc\u00eda","ror":"https://ror.org/01jem9c82"},{"id":"https://openalex.org/F4320334923","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2144264688.pdf","grobid_xml":"https://content.openalex.org/works/W2144264688.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1532171086","https://openalex.org/W2020561965","https://openalex.org/W2068440090","https://openalex.org/W2080211619","https://openalex.org/W2105851490","https://openalex.org/W2144000913","https://openalex.org/W2150908245","https://openalex.org/W2159482845","https://openalex.org/W2165729837","https://openalex.org/W2168103533","https://openalex.org/W4294216483","https://openalex.org/W6631996847"],"related_works":["https://openalex.org/W2362192218","https://openalex.org/W2381477132","https://openalex.org/W1867395701","https://openalex.org/W2377000990","https://openalex.org/W2386636980","https://openalex.org/W2120460904","https://openalex.org/W1602573413","https://openalex.org/W2369157347","https://openalex.org/W2373434917","https://openalex.org/W2791275966"],"abstract_inverted_index":{"SBMM":[0],"Assistant":[1],"for":[2],"academic":[3],"use":[4],"is":[5],"freely":[6],"available":[7],"at":[8],"http://www.sbmm.uma.es.":[9]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":5}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
