{"id":"https://openalex.org/W2159124857","doi":"https://doi.org/10.1093/bioinformatics/btn528","title":"The Protein Feature Ontology: a tool for the unification of protein feature annotations","display_name":"The Protein Feature Ontology: a tool for the unification of protein feature annotations","publication_year":2008,"publication_date":"2008-10-20","ids":{"openalex":"https://openalex.org/W2159124857","doi":"https://doi.org/10.1093/bioinformatics/btn528","mag":"2159124857","pmid":"https://pubmed.ncbi.nlm.nih.gov/18936051"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btn528","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn528","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://kclpure.kcl.ac.uk/portal/en/publications/ecf7cdf8-6c2a-4ff9-b8d6-3386ba53ee98","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022866323","display_name":"Gabrielle A. Reeves","orcid":null},"institutions":[{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]}],"countries":["ES","GB"],"is_corresponding":true,"raw_author_name":"Gabrielle A. Reeves","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014696304","display_name":"Karen Eilbeck","orcid":"https://orcid.org/0000-0002-0831-6427"},"institutions":[{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Karen Eilbeck","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004635493","display_name":"Michele Magrane","orcid":"https://orcid.org/0000-0003-3544-996X"},"institutions":[{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Michele Magrane","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066278201","display_name":"Claire O\u2019Donovan","orcid":"https://orcid.org/0000-0001-8051-7429"},"institutions":[{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Claire O'Donovan","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025623787","display_name":"Luisa Montecchi\u2010Palazzi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Luisa Montecchi-Palazzi","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024953209","display_name":"Midori A. Harris","orcid":"https://orcid.org/0000-0003-4148-4606"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Midori A. Harris","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026050023","display_name":"Sandra Orchard","orcid":"https://orcid.org/0000-0002-8878-3972"},"institutions":[{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Sandra Orchard","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056920611","display_name":"Rafael C. Jim\u00e9nez","orcid":"https://orcid.org/0000-0001-5404-7670"},"institutions":[{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Rafael C. Jimenez","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077634829","display_name":"Andreas Prli\u0107","orcid":"https://orcid.org/0000-0001-6346-6391"},"institutions":[{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Andreas Prlic","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007549481","display_name":"Tim Hubbard","orcid":"https://orcid.org/0000-0002-1767-9318"},"institutions":[{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Tim J. P. Hubbard","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066783652","display_name":"Henning Hermjakob","orcid":"https://orcid.org/0000-0001-8479-0262"},"institutions":[{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Henning Hermjakob","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068874280","display_name":"Janet M. Thornton","orcid":"https://orcid.org/0000-0003-0824-4096"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["ES","GB"],"is_corresponding":false,"raw_author_name":"Janet M. Thornton","raw_affiliation_strings":["1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"1 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, 2Eccles Institute of Human Genetics, 15 North, 2030 East, University of Utah, Salt Lake City, UT 84112, USA, 3Bioinformatics and Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain and 4The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I1303153112","https://openalex.org/I4210165109"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5022866323"],"corresponding_institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I2802476451","https://openalex.org/I4210165109"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.9261,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.85833298,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"24","issue":"23","first_page":"2767","last_page":"2772"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.767498791217804},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6795989274978638},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.560969352722168},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5511429905891418},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.5154953598976135},{"id":"https://openalex.org/keywords/vocabulary","display_name":"Vocabulary","score":0.5121698379516602},{"id":"https://openalex.org/keywords/prot\u00e9g\u00e9","display_name":"Prot\u00e9g\u00e9","score":0.4972880184650421},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4504084885120392},{"id":"https://openalex.org/keywords/structural-genomics","display_name":"Structural genomics","score":0.4280029535293579},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.40712231397628784},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.24754804372787476},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.20234650373458862},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13196727633476257},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09870254993438721}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.767498791217804},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6795989274978638},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.560969352722168},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5511429905891418},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.5154953598976135},{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.5121698379516602},{"id":"https://openalex.org/C2779247653","wikidata":"https://www.wikidata.org/wiki/Q2066865","display_name":"Prot\u00e9g\u00e9","level":3,"score":0.4972880184650421},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4504084885120392},{"id":"https://openalex.org/C192772702","wikidata":"https://www.wikidata.org/wiki/Q2583975","display_name":"Structural genomics","level":3,"score":0.4280029535293579},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.40712231397628784},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.24754804372787476},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.20234650373458862},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13196727633476257},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09870254993438721},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btn528","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn528","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18936051","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18936051","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:kclpure.kcl.ac.uk:openaire/ecf7cdf8-6c2a-4ff9-b8d6-3386ba53ee98","is_oa":true,"landing_page_url":"https://kclpure.kcl.ac.uk/portal/en/publications/ecf7cdf8-6c2a-4ff9-b8d6-3386ba53ee98","pdf_url":null,"source":{"id":"https://openalex.org/S4306400216","display_name":"Research Portal (King's College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183935753","host_organization_name":"King's College London","host_organization_lineage":["https://openalex.org/I183935753"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Reeves, G A, Eilbeck, K, Magrane, M, O'Donovan, C, Montecchi-Palazzi, L, Harris, M A, Orchard, S, Jimenez, R C, Prlic, A, Hubbard, T J P, Hermjakob, H & Thornton, J M 2008, 'The Protein Feature Ontology : a tool for the unification of protein feature annotations', Bioinformatics (Oxford, England), vol. 24, no. 23, pp. 2767-72. https://doi.org/10.1093/bioinformatics/btn528","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:2912506","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2912506","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:kclpure.kcl.ac.uk:openaire/ecf7cdf8-6c2a-4ff9-b8d6-3386ba53ee98","is_oa":true,"landing_page_url":"https://kclpure.kcl.ac.uk/portal/en/publications/ecf7cdf8-6c2a-4ff9-b8d6-3386ba53ee98","pdf_url":null,"source":{"id":"https://openalex.org/S4306400216","display_name":"Research Portal (King's College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183935753","host_organization_name":"King's College London","host_organization_lineage":["https://openalex.org/I183935753"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Reeves, G A, Eilbeck, K, Magrane, M, O'Donovan, C, Montecchi-Palazzi, L, Harris, M A, Orchard, S, Jimenez, R C, Prlic, A, Hubbard, T J P, Hermjakob, H & Thornton, J M 2008, 'The Protein Feature Ontology : a tool for the unification of protein feature annotations', Bioinformatics (Oxford, England), vol. 24, no. 23, pp. 2767-72. https://doi.org/10.1093/bioinformatics/btn528","raw_type":"info:eu-repo/semantics/publishedVersion"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W626692","https://openalex.org/W1971185254","https://openalex.org/W1999615477","https://openalex.org/W2072229457","https://openalex.org/W2081724586","https://openalex.org/W2096317090","https://openalex.org/W2096704019","https://openalex.org/W2097311303","https://openalex.org/W2103017472","https://openalex.org/W2105644689","https://openalex.org/W2110330412","https://openalex.org/W2111841128","https://openalex.org/W2113142309","https://openalex.org/W2121374483","https://openalex.org/W2123171788","https://openalex.org/W2130956021","https://openalex.org/W2141144953","https://openalex.org/W2141885858","https://openalex.org/W2150233912","https://openalex.org/W2151397621","https://openalex.org/W2155225302","https://openalex.org/W2158304452","https://openalex.org/W2158439765","https://openalex.org/W2163109444","https://openalex.org/W2180180358","https://openalex.org/W2604823638","https://openalex.org/W2915868289","https://openalex.org/W4210323379","https://openalex.org/W4233169404","https://openalex.org/W4242161096","https://openalex.org/W4254811854"],"related_works":["https://openalex.org/W2166636248","https://openalex.org/W3113840570","https://openalex.org/W2284058717","https://openalex.org/W2148808972","https://openalex.org/W2159818280","https://openalex.org/W2405033406","https://openalex.org/W2114954739","https://openalex.org/W2807665680","https://openalex.org/W2124230432","https://openalex.org/W2801633971"],"abstract_inverted_index":{"The":[0],"Protein":[1],"Feature":[2],"Ontology":[3],"can":[4],"be":[5],"browsed":[6],"by":[7],"accessing":[8],"the":[9,14],"ontology":[10],"lookup":[11],"service":[12],"at":[13],"European":[15],"Bioinformatics":[16],"Institute":[17],"(http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS).":[18]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2016-06-24T00:00:00"}