{"id":"https://openalex.org/W2160354730","doi":"https://doi.org/10.1093/bioinformatics/btn490","title":"GenMiner: mining non-redundant association rules from integrated gene expression data and annotations","display_name":"GenMiner: mining non-redundant association rules from integrated gene expression data and annotations","publication_year":2008,"publication_date":"2008-09-17","ids":{"openalex":"https://openalex.org/W2160354730","doi":"https://doi.org/10.1093/bioinformatics/btn490","mag":"2160354730","pmid":"https://pubmed.ncbi.nlm.nih.gov/18799482"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btn490","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn490","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/22/2643/49055277/bioinformatics_24_22_2643.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/24/22/2643/49055277/bioinformatics_24_22_2643.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042125476","display_name":"Ricardo Mart\u00ed\u00adnez","orcid":"https://orcid.org/0000-0003-3097-5485"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210106479","display_name":"Laboratoire d'Informatique, Signaux et Syst\u00e8mes de Sophia Antipolis","ror":"https://ror.org/01215r597","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I201841394","https://openalex.org/I4210106479","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Ricardo Martinez","raw_affiliation_strings":["1 Laboratoire I3S, UNSA/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA/CNRS UMR-6543, Parc Valrose, 06108 Nice, France","Laboratoire d'Informatique, Signaux, et Syst\u00e8mes de Sophia Antipolis"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire I3S, UNSA/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA/CNRS UMR-6543, Parc Valrose, 06108 Nice, France","institution_ids":["https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Laboratoire d'Informatique, Signaux, et Syst\u00e8mes de Sophia Antipolis","institution_ids":["https://openalex.org/I4210106479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032150969","display_name":"Nicolas Pasquier","orcid":"https://orcid.org/0000-0002-6529-6944"},"institutions":[{"id":"https://openalex.org/I4210106479","display_name":"Laboratoire d'Informatique, Signaux et Syst\u00e8mes de Sophia Antipolis","ror":"https://ror.org/01215r597","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I201841394","https://openalex.org/I4210106479","https://openalex.org/I4210159245"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Nicolas Pasquier","raw_affiliation_strings":["1 Laboratoire I3S, UNSA/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA/CNRS UMR-6543, Parc Valrose, 06108 Nice, France","Laboratoire d'Informatique, Signaux, et Syst\u00e8mes de Sophia Antipolis"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire I3S, UNSA/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA/CNRS UMR-6543, Parc Valrose, 06108 Nice, France","institution_ids":["https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Laboratoire d'Informatique, Signaux, et Syst\u00e8mes de Sophia Antipolis","institution_ids":["https://openalex.org/I4210106479"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079869736","display_name":"Claude Pasquier","orcid":"https://orcid.org/0000-0001-7498-395X"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Claude Pasquier","raw_affiliation_strings":["1 Laboratoire I3S, UNSA/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA/CNRS UMR-6543, Parc Valrose, 06108 Nice, France","Institute of Developmental Biology and Cancer"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire I3S, UNSA/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA/CNRS UMR-6543, Parc Valrose, 06108 Nice, France","institution_ids":["https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Institute of Developmental Biology and Cancer","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5042125476"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210106479"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":8.7478,"has_fulltext":true,"cited_by_count":67,"citation_normalized_percentile":{"value":0.97461306,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"24","issue":"22","first_page":"2643","last_page":"2644"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11063","display_name":"Rough Sets and Fuzzy Logic","score":0.9496999979019165,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/association-rule-learning","display_name":"Association rule learning","score":0.791386067867279},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7283163666725159},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.6861509084701538},{"id":"https://openalex.org/keywords/discretization","display_name":"Discretization","score":0.6527141332626343},{"id":"https://openalex.org/keywords/apriori-algorithm","display_name":"Apriori algorithm","score":0.6516982316970825},{"id":"https://openalex.org/keywords/a-priori-and-a-posteriori","display_name":"A priori and a posteriori","score":0.6129277348518372},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5568488836288452},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.5394625663757324},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.4693121910095215},{"id":"https://openalex.org/keywords/software-implementation","display_name":"Software implementation","score":0.4230499267578125},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.15246886014938354},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12590208649635315}],"concepts":[{"id":"https://openalex.org/C193524817","wikidata":"https://www.wikidata.org/wiki/Q386780","display_name":"Association rule learning","level":2,"score":0.791386067867279},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7283163666725159},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.6861509084701538},{"id":"https://openalex.org/C73000952","wikidata":"https://www.wikidata.org/wiki/Q17007827","display_name":"Discretization","level":2,"score":0.6527141332626343},{"id":"https://openalex.org/C81440476","wikidata":"https://www.wikidata.org/wiki/Q513511","display_name":"Apriori algorithm","level":3,"score":0.6516982316970825},{"id":"https://openalex.org/C75553542","wikidata":"https://www.wikidata.org/wiki/Q178161","display_name":"A priori and a posteriori","level":2,"score":0.6129277348518372},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5568488836288452},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.5394625663757324},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.4693121910095215},{"id":"https://openalex.org/C2983609787","wikidata":"https://www.wikidata.org/wiki/Q10534782","display_name":"Software implementation","level":3,"score":0.4230499267578125},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.15246886014938354},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12590208649635315},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btn490","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn490","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/22/2643/49055277/bioinformatics_24_22_2643.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18799482","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18799482","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-00361418v1","is_oa":true,"landing_page_url":"https://hal.science/hal-00361418","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2008, 24 (22), pp.2643-4. &#x27E8;10.1093/bioinformatics/btn490&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:HAL:hal-01154857v1","is_oa":false,"landing_page_url":"https://hal.archives-ouvertes.fr/hal-01154857","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1367-4803","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btn490","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn490","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/22/2643/49055277/bioinformatics_24_22_2643.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2160354730.pdf","grobid_xml":"https://content.openalex.org/works/W2160354730.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1484413656","https://openalex.org/W1532476473","https://openalex.org/W1997309399","https://openalex.org/W2037965136","https://openalex.org/W2104143846","https://openalex.org/W2109464129","https://openalex.org/W2116327372","https://openalex.org/W2135666144","https://openalex.org/W2150926065","https://openalex.org/W2913593077","https://openalex.org/W6628750762","https://openalex.org/W6660290183","https://openalex.org/W6677047332","https://openalex.org/W6680051550"],"related_works":["https://openalex.org/W2390051172","https://openalex.org/W2297208791","https://openalex.org/W2367209111","https://openalex.org/W2351000793","https://openalex.org/W2366790077","https://openalex.org/W2348276166","https://openalex.org/W3034345083","https://openalex.org/W2607264580","https://openalex.org/W3012205960","https://openalex.org/W1483188779"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":13},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":5}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
