{"id":"https://openalex.org/W2100303227","doi":"https://doi.org/10.1093/bioinformatics/btm091","title":"Enhancements and modifications of primer design program Primer3","display_name":"Enhancements and modifications of primer design program Primer3","publication_year":2007,"publication_date":"2007-03-22","ids":{"openalex":"https://openalex.org/W2100303227","doi":"https://doi.org/10.1093/bioinformatics/btm091","mag":"2100303227","pmid":"https://pubmed.ncbi.nlm.nih.gov/17379693"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btm091","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm091","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/10/1289/497893/btm091.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/23/10/1289/497893/btm091.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066289034","display_name":"Triinu K\u00f5ressaar","orcid":null},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":true,"raw_author_name":"Triinu Koressaar","raw_affiliation_strings":["Department of Bioinformatics, Institute of Molecular and Cell Biology, University of Tartu, Riia str. 23, Tartu 51010, Estonia"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Institute of Molecular and Cell Biology, University of Tartu, Riia str. 23, Tartu 51010, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018565194","display_name":"Maido Remm","orcid":"https://orcid.org/0000-0003-3966-8422"},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Maido Remm","raw_affiliation_strings":["Department of Bioinformatics, Institute of Molecular and Cell Biology, University of Tartu, Riia str. 23, Tartu 51010, Estonia"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Institute of Molecular and Cell Biology, University of Tartu, Riia str. 23, Tartu 51010, Estonia","institution_ids":["https://openalex.org/I56085075"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5066289034"],"corresponding_institution_ids":["https://openalex.org/I56085075"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.6304,"has_fulltext":false,"cited_by_count":2685,"citation_normalized_percentile":{"value":0.93693676,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"23","issue":"10","first_page":"1289","last_page":"1291"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/primer","display_name":"Primer (cosmetics)","score":0.8119224309921265},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6583425998687744},{"id":"https://openalex.org/keywords/melting-temperature","display_name":"Melting temperature","score":0.615152895450592},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5184400081634521},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.37461215257644653},{"id":"https://openalex.org/keywords/thermodynamics","display_name":"Thermodynamics","score":0.21157711744308472},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.18979254364967346},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.13027256727218628},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08696764707565308}],"concepts":[{"id":"https://openalex.org/C2777563447","wikidata":"https://www.wikidata.org/wiki/Q7243397","display_name":"Primer (cosmetics)","level":2,"score":0.8119224309921265},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6583425998687744},{"id":"https://openalex.org/C2985276288","wikidata":"https://www.wikidata.org/wiki/Q16873139","display_name":"Melting temperature","level":2,"score":0.615152895450592},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5184400081634521},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.37461215257644653},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.21157711744308472},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.18979254364967346},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.13027256727218628},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08696764707565308},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btm091","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm091","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/10/1289/497893/btm091.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17379693","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17379693","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btm091","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm091","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/10/1289/497893/btm091.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323985","display_name":"Ettev\u00f5tluse Arendamise Sihtasutus","ror":"https://ror.org/02sfn4p13"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2100303227.pdf","grobid_xml":"https://content.openalex.org/works/W2100303227.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1499500424","https://openalex.org/W1602584334","https://openalex.org/W2009095852","https://openalex.org/W2009215649","https://openalex.org/W2021838563","https://openalex.org/W2052532932","https://openalex.org/W2076096295","https://openalex.org/W2082931201","https://openalex.org/W2096412974","https://openalex.org/W2105433010","https://openalex.org/W2112333437","https://openalex.org/W2133935621","https://openalex.org/W2135995702","https://openalex.org/W2142613131","https://openalex.org/W6629874611"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2375570161","https://openalex.org/W2371958667","https://openalex.org/W2390279801","https://openalex.org/W2333833013","https://openalex.org/W2358668433","https://openalex.org/W2360079597","https://openalex.org/W2376932109","https://openalex.org/W4223953284"],"abstract_inverted_index":{"Features":[0],"described":[1],"in":[2,18],"this":[3],"article":[4],"have":[5],"been":[6],"implemented":[7],"into":[8],"the":[9,34,52,59],"development":[10],"code":[11,54],"of":[12,25,36,45],"Primer3":[13],"and":[14,23,51],"will":[15],"be":[16],"available":[17,48],"future":[19],"versions":[20],"(version":[21],"1.1":[22],"newer)":[24],"Primer3.":[26],"Also,":[27],"a":[28],"modified":[29],"version":[30,44],"is":[31,39,47,55],"compiled":[32],"under":[33],"name":[35],"mPrimer3":[37,46],"which":[38],"distributed":[40],"independently.":[41],"The":[42],"web-based":[43],"at":[49],"http://bioinfo.ebc.ee/mprimer3/":[50],"binary":[53],"freely":[56],"downloadable":[57],"from":[58],"URL":[60],"http://bioinfo.ebc.ee/download/.":[61]},"counts_by_year":[{"year":2026,"cited_by_count":35},{"year":2025,"cited_by_count":141},{"year":2024,"cited_by_count":174},{"year":2023,"cited_by_count":182},{"year":2022,"cited_by_count":187},{"year":2021,"cited_by_count":231},{"year":2020,"cited_by_count":252},{"year":2019,"cited_by_count":277},{"year":2018,"cited_by_count":246},{"year":2017,"cited_by_count":245},{"year":2016,"cited_by_count":254},{"year":2015,"cited_by_count":228},{"year":2014,"cited_by_count":156},{"year":2013,"cited_by_count":28},{"year":2012,"cited_by_count":12}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}
