{"id":"https://openalex.org/W2138000345","doi":"https://doi.org/10.1093/bioinformatics/btl519","title":"Repseek, a tool to retrieve approximate repeats from large DNA sequences","display_name":"Repseek, a tool to retrieve approximate repeats from large DNA sequences","publication_year":2006,"publication_date":"2006-10-11","ids":{"openalex":"https://openalex.org/W2138000345","doi":"https://doi.org/10.1093/bioinformatics/btl519","mag":"2138000345","pmid":"https://pubmed.ncbi.nlm.nih.gov/17038345"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btl519","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl519","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/1/119/465117/btl519.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/23/1/119/465117/btl519.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010599097","display_name":"Guillaume Achaz","orcid":"https://orcid.org/0000-0003-4514-5935"},"institutions":[{"id":"https://openalex.org/I4210103322","display_name":"Institut de Syst\u00e9matique, \u00c9volution, Biodiversit\u00e9","ror":"https://ror.org/01dadvw90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I159885104","https://openalex.org/I2746051580","https://openalex.org/I39804081","https://openalex.org/I4210103322","https://openalex.org/I4210107625","https://openalex.org/I4210123595","https://openalex.org/I52585520"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Guillaume Achaz","raw_affiliation_strings":["Atelier de Bioinformatique, Universit\u00e9 Pierre et Marie Curie-Paris 6 1 \u00a0 1 \u00a0 \u00a0 12, rue Cuvier, 75005 Paris, France","UMR 7138 Syst\u00e9matique, Adaptation, Evolution, Universit\u00e9 Pierre et Marie Curie-Paris 6, B\u00e2timent A 2 \u00a0 2 \u00a0 \u00a0 7, quai St Bernard, 75252 Paris Cedex 05, France"],"affiliations":[{"raw_affiliation_string":"Atelier de Bioinformatique, Universit\u00e9 Pierre et Marie Curie-Paris 6 1 \u00a0 1 \u00a0 \u00a0 12, rue Cuvier, 75005 Paris, France","institution_ids":["https://openalex.org/I39804081"]},{"raw_affiliation_string":"UMR 7138 Syst\u00e9matique, Adaptation, Evolution, Universit\u00e9 Pierre et Marie Curie-Paris 6, B\u00e2timent A 2 \u00a0 2 \u00a0 \u00a0 7, quai St Bernard, 75252 Paris Cedex 05, France","institution_ids":["https://openalex.org/I4210103322","https://openalex.org/I39804081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070115867","display_name":"Fr\u00e9d\u00e9ric Boyer","orcid":"https://orcid.org/0000-0003-0021-9590"},"institutions":[{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fr\u00e9d\u00e9ric Boyer","raw_affiliation_strings":["INRIA-Rh\u00f4ne Alpes projet HELIX, 655, avenue de l'Europe, Montbonnot 3 \u00a0 3 \u00a0 \u00a0 38334 Saint Ismier Cedex, France"],"affiliations":[{"raw_affiliation_string":"INRIA-Rh\u00f4ne Alpes projet HELIX, 655, avenue de l'Europe, Montbonnot 3 \u00a0 3 \u00a0 \u00a0 38334 Saint Ismier Cedex, France","institution_ids":["https://openalex.org/I4210101348","https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027041249","display_name":"Eduardo P. C. Rocha","orcid":"https://orcid.org/0000-0001-7704-822X"},"institutions":[{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Eduardo P. C. Rocha","raw_affiliation_strings":["Atelier de Bioinformatique, Universit\u00e9 Pierre et Marie Curie-Paris 6 1 \u00a0 1 \u00a0 \u00a0 12, rue Cuvier, 75005 Paris, France","Unit\u00e9 G\u00e9n\u00e9tique des G\u00e9nomes Bact\u00e9riens, Institut Pasteur 4 \u00a0 4 \u00a0 \u00a0 28, rue du Dr Roux, 75724 Paris Cedex 15, France"],"affiliations":[{"raw_affiliation_string":"Atelier de Bioinformatique, Universit\u00e9 Pierre et Marie Curie-Paris 6 1 \u00a0 1 \u00a0 \u00a0 12, rue Cuvier, 75005 Paris, France","institution_ids":["https://openalex.org/I39804081"]},{"raw_affiliation_string":"Unit\u00e9 G\u00e9n\u00e9tique des G\u00e9nomes Bact\u00e9riens, Institut Pasteur 4 \u00a0 4 \u00a0 \u00a0 28, rue du Dr Roux, 75724 Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040461698","display_name":"Alain Viari","orcid":"https://orcid.org/0000-0002-1329-7777"},"institutions":[{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Alain Viari","raw_affiliation_strings":["INRIA-Rh\u00f4ne Alpes projet HELIX, 655, avenue de l'Europe, Montbonnot 3 \u00a0 3 \u00a0 \u00a0 38334 Saint Ismier Cedex, France"],"affiliations":[{"raw_affiliation_string":"INRIA-Rh\u00f4ne Alpes projet HELIX, 655, avenue de l'Europe, Montbonnot 3 \u00a0 3 \u00a0 \u00a0 38334 Saint Ismier Cedex, France","institution_ids":["https://openalex.org/I4210101348","https://openalex.org/I1326498283"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025883872","display_name":"\u00c9ric Coissac","orcid":"https://orcid.org/0000-0001-7507-6729"},"institutions":[{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I177483745","display_name":"Universit\u00e9 Joseph Fourier","ror":"https://ror.org/02aj0kh94","country_code":"FR","type":"education","lineage":["https://openalex.org/I177483745"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Eric Coissac","raw_affiliation_strings":["INRIA-Rh\u00f4ne Alpes projet HELIX, 655, avenue de l'Europe, Montbonnot 3 \u00a0 3 \u00a0 \u00a0 38334 Saint Ismier Cedex, France","UMR 5163 LAPM, Universit\u00e9 Joseph Fourier, BP 53 5 \u00a0 5 \u00a0 \u00a0 38041 Grenoble Cedex 9, France"],"affiliations":[{"raw_affiliation_string":"INRIA-Rh\u00f4ne Alpes projet HELIX, 655, avenue de l'Europe, Montbonnot 3 \u00a0 3 \u00a0 \u00a0 38334 Saint Ismier Cedex, France","institution_ids":["https://openalex.org/I4210101348","https://openalex.org/I1326498283"]},{"raw_affiliation_string":"UMR 5163 LAPM, Universit\u00e9 Joseph Fourier, BP 53 5 \u00a0 5 \u00a0 \u00a0 38041 Grenoble Cedex 9, France","institution_ids":["https://openalex.org/I177483745"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5010599097"],"corresponding_institution_ids":["https://openalex.org/I39804081","https://openalex.org/I4210103322"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.0466,"has_fulltext":true,"cited_by_count":78,"citation_normalized_percentile":{"value":0.91491913,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"23","issue":"1","first_page":"119","last_page":"121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/indel","display_name":"Indel","score":0.795494019985199},{"id":"https://openalex.org/keywords/extension","display_name":"Extension (predicate logic)","score":0.6177684664726257},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.5972307920455933},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5624717473983765},{"id":"https://openalex.org/keywords/repeated-sequence","display_name":"Repeated sequence","score":0.553705632686615},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.547374963760376},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.5403916835784912},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5147066712379456},{"id":"https://openalex.org/keywords/direct-repeat","display_name":"Direct repeat","score":0.4756716787815094},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4737868010997772},{"id":"https://openalex.org/keywords/tandem-repeat","display_name":"Tandem repeat","score":0.4293784499168396},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.42932072281837463},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4255581498146057},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3961049020290375},{"id":"https://openalex.org/keywords/base-sequence","display_name":"Base sequence","score":0.23391583561897278},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.15624693036079407},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1322888433933258},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08314692974090576}],"concepts":[{"id":"https://openalex.org/C119054055","wikidata":"https://www.wikidata.org/wiki/Q1576681","display_name":"Indel","level":5,"score":0.795494019985199},{"id":"https://openalex.org/C2778029271","wikidata":"https://www.wikidata.org/wiki/Q5421931","display_name":"Extension (predicate logic)","level":2,"score":0.6177684664726257},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.5972307920455933},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5624717473983765},{"id":"https://openalex.org/C169802333","wikidata":"https://www.wikidata.org/wiki/Q424473","display_name":"Repeated sequence","level":4,"score":0.553705632686615},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.547374963760376},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.5403916835784912},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5147066712379456},{"id":"https://openalex.org/C29511175","wikidata":"https://www.wikidata.org/wiki/Q5280381","display_name":"Direct repeat","level":4,"score":0.4756716787815094},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4737868010997772},{"id":"https://openalex.org/C27149982","wikidata":"https://www.wikidata.org/wiki/Q3456514","display_name":"Tandem repeat","level":4,"score":0.4293784499168396},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.42932072281837463},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4255581498146057},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3961049020290375},{"id":"https://openalex.org/C3017666073","wikidata":"https://www.wikidata.org/wiki/Q1764062","display_name":"Base sequence","level":3,"score":0.23391583561897278},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.15624693036079407},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1322888433933258},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08314692974090576},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D007256","descriptor_name":"Information Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007256","descriptor_name":"Information Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007256","descriptor_name":"Information Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020080","descriptor_name":"Tandem Repeat Sequences","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020080","descriptor_name":"Tandem Repeat Sequences","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020080","descriptor_name":"Tandem Repeat Sequences","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btl519","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl519","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/1/119/465117/btl519.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17038345","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17038345","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btl519","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl519","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/1/119/465117/btl519.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320313934","display_name":"Institut national de recherche en informatique et en automatique (INRIA)","ror":"https://ror.org/02kvxyf05"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2138000345.pdf","grobid_xml":"https://content.openalex.org/works/W2138000345.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1543263356","https://openalex.org/W1965998064","https://openalex.org/W2026586467","https://openalex.org/W2054849588","https://openalex.org/W2063822318","https://openalex.org/W2087064593","https://openalex.org/W2099809434","https://openalex.org/W2116628377","https://openalex.org/W2144268209","https://openalex.org/W2151899848","https://openalex.org/W2158714788","https://openalex.org/W2159656968","https://openalex.org/W2434820933","https://openalex.org/W6632528421"],"related_works":["https://openalex.org/W2059106521","https://openalex.org/W2161263260","https://openalex.org/W2166276175","https://openalex.org/W2000360369","https://openalex.org/W1973950062","https://openalex.org/W2116722153","https://openalex.org/W2090306291","https://openalex.org/W1991437416","https://openalex.org/W1495583714","https://openalex.org/W2138000345"],"abstract_inverted_index":{"http://wwwabi.snv.jussieu.fr/public/RepSeek/":[0]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":6}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}