{"id":"https://openalex.org/W2120064570","doi":"https://doi.org/10.1093/bioinformatics/btl045","title":"Rosetta error model for gene expression analysis","display_name":"Rosetta error model for gene expression analysis","publication_year":2006,"publication_date":"2006-03-07","ids":{"openalex":"https://openalex.org/W2120064570","doi":"https://doi.org/10.1093/bioinformatics/btl045","mag":"2120064570","pmid":"https://pubmed.ncbi.nlm.nih.gov/16522673"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btl045","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl045","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/9/1111/48841175/bioinformatics_22_9_1111.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/22/9/1111/48841175/bioinformatics_22_9_1111.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069168862","display_name":"Lee Weng","orcid":null},"institutions":[{"id":"https://openalex.org/I4210148890","display_name":"Rosetta Stone (United States)","ror":"https://ror.org/05a1nta88","country_code":"US","type":"company","lineage":["https://openalex.org/I4210148890"]},{"id":"https://openalex.org/I175704753","display_name":"North Seattle College","ror":"https://ror.org/02d7rnk16","country_code":"US","type":"education","lineage":["https://openalex.org/I175704753"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lee Weng","raw_affiliation_strings":["Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","institution_ids":["https://openalex.org/I4210148890","https://openalex.org/I175704753"]},{"raw_affiliation_string":"Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#","institution_ids":["https://openalex.org/I4210148890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101790056","display_name":"Hongyue Dai","orcid":"https://orcid.org/0000-0002-6609-9141"},"institutions":[{"id":"https://openalex.org/I4210148890","display_name":"Rosetta Stone (United States)","ror":"https://ror.org/05a1nta88","country_code":"US","type":"company","lineage":["https://openalex.org/I4210148890"]},{"id":"https://openalex.org/I175704753","display_name":"North Seattle College","ror":"https://ror.org/02d7rnk16","country_code":"US","type":"education","lineage":["https://openalex.org/I175704753"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hongyue Dai","raw_affiliation_strings":["Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","institution_ids":["https://openalex.org/I4210148890","https://openalex.org/I175704753"]},{"raw_affiliation_string":"Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#","institution_ids":["https://openalex.org/I4210148890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085512789","display_name":"Yihui Zhan","orcid":null},"institutions":[{"id":"https://openalex.org/I175704753","display_name":"North Seattle College","ror":"https://ror.org/02d7rnk16","country_code":"US","type":"education","lineage":["https://openalex.org/I175704753"]},{"id":"https://openalex.org/I4210148890","display_name":"Rosetta Stone (United States)","ror":"https://ror.org/05a1nta88","country_code":"US","type":"company","lineage":["https://openalex.org/I4210148890"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yihui Zhan","raw_affiliation_strings":["Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","institution_ids":["https://openalex.org/I4210148890","https://openalex.org/I175704753"]},{"raw_affiliation_string":"Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#","institution_ids":["https://openalex.org/I4210148890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101440725","display_name":"Yudong D. He","orcid":"https://orcid.org/0000-0003-0818-605X"},"institutions":[{"id":"https://openalex.org/I175704753","display_name":"North Seattle College","ror":"https://ror.org/02d7rnk16","country_code":"US","type":"education","lineage":["https://openalex.org/I175704753"]},{"id":"https://openalex.org/I4210148890","display_name":"Rosetta Stone (United States)","ror":"https://ror.org/05a1nta88","country_code":"US","type":"company","lineage":["https://openalex.org/I4210148890"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yudong He","raw_affiliation_strings":["Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","institution_ids":["https://openalex.org/I4210148890","https://openalex.org/I175704753"]},{"raw_affiliation_string":"Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#","institution_ids":["https://openalex.org/I4210148890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110062132","display_name":"S. Stepaniants","orcid":null},"institutions":[{"id":"https://openalex.org/I4210148890","display_name":"Rosetta Stone (United States)","ror":"https://ror.org/05a1nta88","country_code":"US","type":"company","lineage":["https://openalex.org/I4210148890"]},{"id":"https://openalex.org/I175704753","display_name":"North Seattle College","ror":"https://ror.org/02d7rnk16","country_code":"US","type":"education","lineage":["https://openalex.org/I175704753"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sergey B. Stepaniants","raw_affiliation_strings":["Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","institution_ids":["https://openalex.org/I4210148890","https://openalex.org/I175704753"]},{"raw_affiliation_string":"Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#","institution_ids":["https://openalex.org/I4210148890"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055048563","display_name":"Douglas E. Bassett","orcid":"https://orcid.org/0000-0002-1619-4618"},"institutions":[{"id":"https://openalex.org/I4210148890","display_name":"Rosetta Stone (United States)","ror":"https://ror.org/05a1nta88","country_code":"US","type":"company","lineage":["https://openalex.org/I4210148890"]},{"id":"https://openalex.org/I175704753","display_name":"North Seattle College","ror":"https://ror.org/02d7rnk16","country_code":"US","type":"education","lineage":["https://openalex.org/I175704753"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Douglas E. Bassett","raw_affiliation_strings":["Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Rosetta Inpharmatics LLC \u00a0 401 Terry Avenue North, Seattle, WA 98109, USA","institution_ids":["https://openalex.org/I4210148890","https://openalex.org/I175704753"]},{"raw_affiliation_string":"Rosetta Inpharmatics LLC 401 Terry Avenue North, Seattle, WA 98109, USA#TAB#","institution_ids":["https://openalex.org/I4210148890"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5069168862"],"corresponding_institution_ids":["https://openalex.org/I175704753","https://openalex.org/I4210148890"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":15.529,"has_fulltext":true,"cited_by_count":303,"citation_normalized_percentile":{"value":0.99592062,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"22","issue":"9","first_page":"1111","last_page":"1121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9861000180244446,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6978425979614258},{"id":"https://openalex.org/keywords/variance","display_name":"Variance (accounting)","score":0.6880909204483032},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5536662340164185},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.48005354404449463},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.4682304263114929},{"id":"https://openalex.org/keywords/statistical-model","display_name":"Statistical model","score":0.4284036457538605},{"id":"https://openalex.org/keywords/sensitivity","display_name":"Sensitivity (control systems)","score":0.424641489982605},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41276291012763977},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.36301684379577637},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3405029773712158},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3332480490207672},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2736102342605591},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2164669930934906},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.1363513171672821},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10764998197555542},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09698134660720825},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08480167388916016}],"concepts":[{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6978425979614258},{"id":"https://openalex.org/C196083921","wikidata":"https://www.wikidata.org/wiki/Q7915758","display_name":"Variance (accounting)","level":2,"score":0.6880909204483032},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5536662340164185},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.48005354404449463},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.4682304263114929},{"id":"https://openalex.org/C114289077","wikidata":"https://www.wikidata.org/wiki/Q3284399","display_name":"Statistical model","level":2,"score":0.4284036457538605},{"id":"https://openalex.org/C21200559","wikidata":"https://www.wikidata.org/wiki/Q7451068","display_name":"Sensitivity (control systems)","level":2,"score":0.424641489982605},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41276291012763977},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.36301684379577637},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3405029773712158},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3332480490207672},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2736102342605591},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2164669930934906},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.1363513171672821},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10764998197555542},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09698134660720825},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08480167388916016},{"id":"https://openalex.org/C24326235","wikidata":"https://www.wikidata.org/wiki/Q126095","display_name":"Electronic engineering","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C121955636","wikidata":"https://www.wikidata.org/wiki/Q4116214","display_name":"Accounting","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000704","descriptor_name":"Analysis of Variance","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000704","descriptor_name":"Analysis of Variance","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000704","descriptor_name":"Analysis of Variance","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btl045","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl045","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/9/1111/48841175/bioinformatics_22_9_1111.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16522673","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16522673","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.107.7221","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.107.7221","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"http://bioinformatics.oxfordjournals.org/cgi/reprint/btl045v1.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.918.2284","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.918.2284","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2006/03/07/bioinformatics.btl045.full.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btl045","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl045","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/9/1111/48841175/bioinformatics_22_9_1111.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2120064570.pdf","grobid_xml":"https://content.openalex.org/works/W2120064570.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W1119895478","https://openalex.org/W1197989244","https://openalex.org/W1225648395","https://openalex.org/W1452497191","https://openalex.org/W1685500238","https://openalex.org/W1969758193","https://openalex.org/W1971706575","https://openalex.org/W1992242907","https://openalex.org/W2012362209","https://openalex.org/W2019923915","https://openalex.org/W2038437697","https://openalex.org/W2040482262","https://openalex.org/W2063862573","https://openalex.org/W2081098333","https://openalex.org/W2100668965","https://openalex.org/W2105793531","https://openalex.org/W2105893126","https://openalex.org/W2110909777","https://openalex.org/W2119596946","https://openalex.org/W2130494035","https://openalex.org/W2133111499","https://openalex.org/W2136188920","https://openalex.org/W2138321690","https://openalex.org/W2139290043","https://openalex.org/W2146007051","https://openalex.org/W2146264532","https://openalex.org/W2146614932","https://openalex.org/W2148560592","https://openalex.org/W2157795344","https://openalex.org/W2158096909","https://openalex.org/W2162871532","https://openalex.org/W2163813213","https://openalex.org/W2165054897","https://openalex.org/W4233622718","https://openalex.org/W4243634040","https://openalex.org/W4247420482","https://openalex.org/W4285719527","https://openalex.org/W4294107304","https://openalex.org/W6675951063","https://openalex.org/W6680871193","https://openalex.org/W6682356255"],"related_works":["https://openalex.org/W2378757965","https://openalex.org/W4224903346","https://openalex.org/W2392243736","https://openalex.org/W86652014","https://openalex.org/W1593262897","https://openalex.org/W2372869593","https://openalex.org/W2384194537","https://openalex.org/W2031011156","https://openalex.org/W1991935520","https://openalex.org/W2368745429"],"abstract_inverted_index":{"The":[0],"Rosetta":[1],"error":[2,22,27,42,53,74],"model":[3,23,54],"captures":[4],"the":[5,34,44,51,70,93],"variance-intensity":[6],"relationship":[7],"for":[8,47,55],"various":[9],"types":[10],"of":[11,72,80,95],"microarray":[12,81],"technologies,":[13],"such":[14],"as":[15],"single-color":[16,48,63],"arrays":[17],"and":[18,28,50,90],"two-color":[19,56],"arrays.":[20,64],"This":[21],"conservatively":[24],"estimates":[25],"intensity":[26,45],"uses":[29],"this":[30],"value":[31],"to":[32,68],"stabilize":[33],"variance":[35],"estimation.":[36],"We":[37,65],"present":[38,66],"two":[39,62],"commonly":[40],"used":[41],"models:":[43],"error-model":[46],"microarrays":[49,57],"ratio":[52],"or":[58],"ratios":[59],"built":[60],"from":[61],"examples":[67],"demonstrate":[69],"strength":[71],"our":[73],"models":[75],"in":[76,85],"improving":[77],"statistical":[78],"power":[79],"data":[82],"analysis,":[83],"particularly,":[84],"increasing":[86],"expression":[87],"detection":[88],"sensitivity":[89],"specificity":[91],"when":[92],"number":[94],"replicates":[96],"is":[97],"limited.":[98]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":11},{"year":2014,"cited_by_count":22},{"year":2013,"cited_by_count":19},{"year":2012,"cited_by_count":29}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
