{"id":"https://openalex.org/W2147902743","doi":"https://doi.org/10.1093/bioinformatics/btg101","title":"MuGeN: simultaneous exploration of multiplegenomes and computer analysis results","display_name":"MuGeN: simultaneous exploration of multiplegenomes and computer analysis results","publication_year":2003,"publication_date":"2003-04-30","ids":{"openalex":"https://openalex.org/W2147902743","doi":"https://doi.org/10.1093/bioinformatics/btg101","mag":"2147902743","pmid":"https://pubmed.ncbi.nlm.nih.gov/12724296"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btg101","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg101","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/7/859/48904331/bioinformatics_19_7_859.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/19/7/859/48904331/bioinformatics_19_7_859.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084366252","display_name":"Mark Hoebeke","orcid":"https://orcid.org/0000-0001-6311-9752"},"institutions":[{"id":"https://openalex.org/I4210159481","display_name":"Math\u00e9matiques et Informatique Appliqu\u00e9es du G\u00e9nome \u00e0 l'Environnement","ror":"https://ror.org/05qdnns64","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4210099460","https://openalex.org/I4210159481"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Mark Hoebeke","raw_affiliation_strings":["Unit\u00e9 Math\u00e9matique, Informatique & G\u00e9nome - INRA - Domaine de Vilvert - F 78352 Jouy en Josas CEDEX, France. mark.hoebeke@jouy.inra.fr","Unit \u00e9 Math \u00e9matique, Informatique & G \u00e9nome -INRA -Domaine de Vilvert -F 78352 Jouy en Josas CEDEX, France and"],"affiliations":[{"raw_affiliation_string":"Unit\u00e9 Math\u00e9matique, Informatique & G\u00e9nome - INRA - Domaine de Vilvert - F 78352 Jouy en Josas CEDEX, France. mark.hoebeke@jouy.inra.fr","institution_ids":["https://openalex.org/I4210159481"]},{"raw_affiliation_string":"Unit \u00e9 Math \u00e9matique, Informatique & G \u00e9nome -INRA -Domaine de Vilvert -F 78352 Jouy en Josas CEDEX, France and","institution_ids":["https://openalex.org/I4210159481"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086683190","display_name":"Pierre Nicolas","orcid":"https://orcid.org/0000-0002-1133-0609"},"institutions":[{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210159481","display_name":"Math\u00e9matiques et Informatique Appliqu\u00e9es du G\u00e9nome \u00e0 l'Environnement","ror":"https://ror.org/05qdnns64","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4210099460","https://openalex.org/I4210159481"]},{"id":"https://openalex.org/I4210116548","display_name":"Laboratoire de Statistique Th\u00e9orique et Appliqu\u00e9e","ror":"https://ror.org/01vnn4t89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I39804081","https://openalex.org/I4210116548","https://openalex.org/I4210141950"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Nicolas","raw_affiliation_strings":["Laboratoire de Statistique et G nome, CNRS -Tour vry2, 523 place des terrasses de l'Agora -F 91034 vry, France","Unit  Math matique, Informatique & G nome -INRA -Domaine de Vilvert -F 78352 Jouy en Josas CEDEX, France and","Unit \u00e9 Math \u00e9matique, Informatique & G \u00e9nome -INRA -Domaine de Vilvert -F 78352 Jouy en Josas CEDEX, France and","Laboratoire de Statistique et G \u00e9nome, CNRS -Tour \u00c9vry2, 523 place des terrasses de l'Agora -F 91034 \u00c9vry, France"],"affiliations":[{"raw_affiliation_string":"Laboratoire de Statistique et G nome, CNRS -Tour vry2, 523 place des terrasses de l'Agora -F 91034 vry, France","institution_ids":["https://openalex.org/I4210116548","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Unit  Math matique, Informatique & G nome -INRA -Domaine de Vilvert -F 78352 Jouy en Josas CEDEX, France and","institution_ids":["https://openalex.org/I4210159481"]},{"raw_affiliation_string":"Unit \u00e9 Math \u00e9matique, Informatique & G \u00e9nome -INRA -Domaine de Vilvert -F 78352 Jouy en Josas CEDEX, France and","institution_ids":["https://openalex.org/I4210159481"]},{"raw_affiliation_string":"Laboratoire de Statistique et G \u00e9nome, CNRS -Tour \u00c9vry2, 523 place des terrasses de l'Agora -F 91034 \u00c9vry, France","institution_ids":["https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068002461","display_name":"Philippe Bessi\u00e8res","orcid":null},"institutions":[{"id":"https://openalex.org/I4210159481","display_name":"Math\u00e9matiques et Informatique Appliqu\u00e9es du G\u00e9nome \u00e0 l'Environnement","ror":"https://ror.org/05qdnns64","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4210099460","https://openalex.org/I4210159481"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Philippe Bessi\u00e8res","raw_affiliation_strings":["Unit \u00e9 Math \u00e9matique, Informatique & G \u00e9nome -INRA -Domaine de Vilvert -F 78352 Jouy en Josas CEDEX, France and"],"affiliations":[{"raw_affiliation_string":"Unit \u00e9 Math \u00e9matique, Informatique & G \u00e9nome -INRA -Domaine de Vilvert -F 78352 Jouy en Josas CEDEX, France and","institution_ids":["https://openalex.org/I4210159481"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5084366252"],"corresponding_institution_ids":["https://openalex.org/I4210159481"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.6659,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.67152319,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"19","issue":"7","first_page":"859","last_page":"864"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12858","display_name":"Plant Disease Resistance and Genetics","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6610539555549622},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.47506067156791687},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4435524046421051},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4110247492790222},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3644448518753052},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.26113361120224},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21347355842590332},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1560918390750885},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.05411270260810852}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6610539555549622},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.47506067156791687},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4435524046421051},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4110247492790222},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3644448518753052},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.26113361120224},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21347355842590332},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1560918390750885},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.05411270260810852}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009862","descriptor_name":"Online Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009862","descriptor_name":"Online Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009862","descriptor_name":"Online Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btg101","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg101","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/7/859/48904331/bioinformatics_19_7_859.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:12724296","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12724296","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btg101","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg101","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/7/859/48904331/bioinformatics_19_7_859.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2147902743.pdf","grobid_xml":"https://content.openalex.org/works/W2147902743.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1598176384","https://openalex.org/W1649645444","https://openalex.org/W1971403296","https://openalex.org/W1996423252","https://openalex.org/W2026199611","https://openalex.org/W2073353609","https://openalex.org/W2084902262","https://openalex.org/W2100882223","https://openalex.org/W2103129584","https://openalex.org/W2107424557","https://openalex.org/W2128016314","https://openalex.org/W2133253129","https://openalex.org/W2145477956","https://openalex.org/W2146851759","https://openalex.org/W2148853951","https://openalex.org/W2150934173","https://openalex.org/W2152089378","https://openalex.org/W2158304452","https://openalex.org/W2160053034","https://openalex.org/W2162407342","https://openalex.org/W2163781727","https://openalex.org/W2170488656","https://openalex.org/W4292158482"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W4391913857","https://openalex.org/W2350741829","https://openalex.org/W2530322880"],"abstract_inverted_index":{"MuGeN":[0],"is":[1],"available":[2],"at":[3],"http://www-mig.jouy.inra.fr/bdsi/MuGeN.":[4]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
