{"id":"https://openalex.org/W4413110846","doi":"https://doi.org/10.1093/bioinformatics/btaf445","title":"GS-DTI: a graph-structure-aware framework leveraging large language models for drug\u2013target interaction prediction","display_name":"GS-DTI: a graph-structure-aware framework leveraging large language models for drug\u2013target interaction prediction","publication_year":2025,"publication_date":"2025-08-01","ids":{"openalex":"https://openalex.org/W4413110846","doi":"https://doi.org/10.1093/bioinformatics/btaf445","pmid":"https://pubmed.ncbi.nlm.nih.gov/40795814"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf445","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf445","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bioinformatics/btaf445","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069586601","display_name":"Qinze Yu","orcid":"https://orcid.org/0009-0000-5116-2833"},"institutions":[{"id":"https://openalex.org/I4210086892","display_name":"Education University of Hong Kong","ror":"https://ror.org/000t0f062","country_code":"HK","type":"education","lineage":["https://openalex.org/I4210086892"]},{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":true,"raw_author_name":"Qinze Yu","raw_affiliation_strings":["Department of Computer Science and Engineering, CUHK , Hong Kong SAR 999077,","Department of Computer Science and Engineering, CUHK, Hong Kong SAR 999077, China","Department of Computer Science and Engineering, CUHK, Hong Kong SAR, China","CUHK Department of Computer Science and Engineering, , Hong Kong SAR,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK , Hong Kong SAR 999077,","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK, Hong Kong SAR 999077, China","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK, Hong Kong SAR, China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"CUHK Department of Computer Science and Engineering, , Hong Kong SAR,","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102025315","display_name":"Chang Zhou","orcid":"https://orcid.org/0000-0001-9241-702X"},"institutions":[{"id":"https://openalex.org/I4210086892","display_name":"Education University of Hong Kong","ror":"https://ror.org/000t0f062","country_code":"HK","type":"education","lineage":["https://openalex.org/I4210086892"]},{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Chang Zhou","raw_affiliation_strings":["Department of Computer Science and Engineering, CUHK , Hong Kong SAR 999077,","Department of Computer Science and Engineering, CUHK, Hong Kong SAR 999077, China","CUHK Department of Computer Science and Engineering, , Hong Kong SAR,","Department of Computer Science and Engineering, CUHK, Hong Kong SAR, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK , Hong Kong SAR 999077,","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK, Hong Kong SAR 999077, China","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"CUHK Department of Computer Science and Engineering, , Hong Kong SAR,","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK, Hong Kong SAR, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038913434","display_name":"Jiyue Jiang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210086892","display_name":"Education University of Hong Kong","ror":"https://ror.org/000t0f062","country_code":"HK","type":"education","lineage":["https://openalex.org/I4210086892"]},{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Jiyue Jiang","raw_affiliation_strings":["Department of Computer Science and Engineering, CUHK , Hong Kong SAR 999077,","Department of Computer Science and Engineering, CUHK, Hong Kong SAR 999077, China","Department of Computer Science and Engineering, CUHK, Hong Kong SAR, China","CUHK Department of Computer Science and Engineering, , Hong Kong SAR,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK , Hong Kong SAR 999077,","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK, Hong Kong SAR 999077, China","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK, Hong Kong SAR, China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"CUHK Department of Computer Science and Engineering, , Hong Kong SAR,","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104086196","display_name":"Xiangyu Shi","orcid":"https://orcid.org/0009-0007-3909-7929"},"institutions":[{"id":"https://openalex.org/I21193070","display_name":"Beijing Jiaotong University","ror":"https://ror.org/01yj56c84","country_code":"CN","type":"education","lineage":["https://openalex.org/I21193070"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangyu Shi","raw_affiliation_strings":["Department of Computer Science and Technology, Beijing JiaoTong University , Beijing 100044,","Department of Computer Science and Technology, Beijing JiaoTong University, Beijing 100044, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Beijing JiaoTong University , Beijing 100044,","institution_ids":["https://openalex.org/I21193070"]},{"raw_affiliation_string":"Department of Computer Science and Technology, Beijing JiaoTong University, Beijing 100044, China","institution_ids":["https://openalex.org/I21193070"]}]},{"author_position":"last","author":{"id":null,"display_name":"Yu Li","orcid":"https://orcid.org/0000-0002-3664-6722"},"institutions":[{"id":"https://openalex.org/I158809036","display_name":"Shenzhen Institute of Information Technology","ror":"https://ror.org/03wrf9427","country_code":"CN","type":"education","lineage":["https://openalex.org/I158809036"]},{"id":"https://openalex.org/I4210086892","display_name":"Education University of Hong Kong","ror":"https://ror.org/000t0f062","country_code":"HK","type":"education","lineage":["https://openalex.org/I4210086892"]},{"id":"https://openalex.org/I4210096887","display_name":"HKUST Shenzhen Research Institute","ror":"https://ror.org/00sz56h79","country_code":"CN","type":"facility","lineage":["https://openalex.org/I200769079","https://openalex.org/I20231570","https://openalex.org/I4210096887","https://openalex.org/I4210147811"]},{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["CN","HK"],"is_corresponding":false,"raw_author_name":"Yu Li","raw_affiliation_strings":["Department of Computer Science and Engineering, CUHK , Hong Kong SAR 999077,","The CUHK Shenzhen Research Institute , Shenzhen 518057,","CUHK Department of Computer Science and Engineering, , Hong Kong SAR,","Department of Computer Science and Engineering, CUHK, Hong Kong SAR, China","The CUHK Shenzhen Research Institute, Shenzhen 518057, China","The CUHK Shenzhen Research Institute , Nanshan, Shenzhen, 518057,","The CUHK Shenzhen Research Institute, Nanshan, Shenzhen, 518057, China","Department of Computer Science and Engineering, CUHK, Hong Kong SAR 999077, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK , Hong Kong SAR 999077,","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"The CUHK Shenzhen Research Institute , Shenzhen 518057,","institution_ids":["https://openalex.org/I158809036","https://openalex.org/I889458895"]},{"raw_affiliation_string":"CUHK Department of Computer Science and Engineering, , Hong Kong SAR,","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK, Hong Kong SAR, China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"The CUHK Shenzhen Research Institute, Shenzhen 518057, China","institution_ids":["https://openalex.org/I158809036","https://openalex.org/I889458895"]},{"raw_affiliation_string":"The CUHK Shenzhen Research Institute , Nanshan, Shenzhen, 518057,","institution_ids":["https://openalex.org/I4210096887","https://openalex.org/I889458895"]},{"raw_affiliation_string":"The CUHK Shenzhen Research Institute, Nanshan, Shenzhen, 518057, China","institution_ids":["https://openalex.org/I4210096887","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, CUHK, Hong Kong SAR 999077, China","institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5069586601"],"corresponding_institution_ids":["https://openalex.org/I4210086892","https://openalex.org/I889458895"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":5.68,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.96212779,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"41","issue":"8","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.982200026512146,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9781000018119812,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7883548736572266},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5522114634513855},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4600297212600708},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.421028196811676},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.38354864716529846},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3731262683868408},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3497641384601593},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3059566915035248}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7883548736572266},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5522114634513855},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4600297212600708},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.421028196811676},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.38354864716529846},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3731262683868408},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3497641384601593},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3059566915035248}],"mesh":[{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016282","descriptor_name":"Aspartic Acid Endopeptidases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D053829","descriptor_name":"Amyloid Precursor Protein Secretases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btaf445","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf445","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40795814","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40795814","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:11204380","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12396372","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12396372","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12396372/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf445","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf445","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1495595508","display_name":null,"funder_award_id":"5501329","funder_id":"https://openalex.org/F4320322942","funder_display_name":"Chinese University of Hong Kong"},{"id":"https://openalex.org/G2978361218","display_name":null,"funder_award_id":"8601663","funder_id":"https://openalex.org/F4320322942","funder_display_name":"Chinese University of Hong Kong"},{"id":"https://openalex.org/G4809109598","display_name":null,"funder_award_id":"4937026","funder_id":"https://openalex.org/F4320322942","funder_display_name":"Chinese University of Hong Kong"},{"id":"https://openalex.org/G5248485515","display_name":null,"funder_award_id":"5501517","funder_id":"https://openalex.org/F4320322942","funder_display_name":"Chinese University of Hong Kong"},{"id":"https://openalex.org/G6562111534","display_name":null,"funder_award_id":"8601603","funder_id":"https://openalex.org/F4320322942","funder_display_name":"Chinese University of Hong Kong"},{"id":"https://openalex.org/G6709416133","display_name":null,"funder_award_id":"4937025","funder_id":"https://openalex.org/F4320322942","funder_display_name":"Chinese University of Hong Kong"}],"funders":[{"id":"https://openalex.org/F4320322942","display_name":"Chinese University of Hong Kong","ror":"https://ror.org/00t33hh48"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W1993046136","https://openalex.org/W1995519690","https://openalex.org/W2055147198","https://openalex.org/W2086286404","https://openalex.org/W2096864392","https://openalex.org/W2102245393","https://openalex.org/W2128124948","https://openalex.org/W2129495914","https://openalex.org/W2130479394","https://openalex.org/W2167212630","https://openalex.org/W2187089797","https://openalex.org/W2259538443","https://openalex.org/W2785947426","https://openalex.org/W2899788782","https://openalex.org/W2911762155","https://openalex.org/W2971801381","https://openalex.org/W3018980093","https://openalex.org/W3096561213","https://openalex.org/W3177500196","https://openalex.org/W3209158709","https://openalex.org/W3210813272","https://openalex.org/W4318981550","https://openalex.org/W4327550249","https://openalex.org/W4361268358","https://openalex.org/W4361985865","https://openalex.org/W4382198799","https://openalex.org/W4388615774","https://openalex.org/W4389131280","https://openalex.org/W4389685276","https://openalex.org/W4391444806","https://openalex.org/W4391995667","https://openalex.org/W4392791245","https://openalex.org/W4402131052","https://openalex.org/W4406279606"],"related_works":["https://openalex.org/W4231937131","https://openalex.org/W323219885","https://openalex.org/W2063928587","https://openalex.org/W1487966966","https://openalex.org/W1589342014","https://openalex.org/W1480341462","https://openalex.org/W598950423","https://openalex.org/W4256673449","https://openalex.org/W4292559016","https://openalex.org/W2143331802"],"abstract_inverted_index":{"The":[0],"GS-DTI":[1],"source":[2],"code":[3],"and":[4],"processed":[5],"datasets":[6],"are":[7,14],"available":[8],"at":[9],"https://github.com/purvavideha/GSDTI.":[10],"All":[11],"experimental":[12],"data":[13],"derived":[15],"from":[16],"public":[17],"sources.":[18]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2}],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
