{"id":"https://openalex.org/W4411056727","doi":"https://doi.org/10.1093/bioinformatics/btaf265","title":"SNACS: a tool for demultiplexing single-cell DNA sequencing data","display_name":"SNACS: a tool for demultiplexing single-cell DNA sequencing data","publication_year":2025,"publication_date":"2025-06-01","ids":{"openalex":"https://openalex.org/W4411056727","doi":"https://doi.org/10.1093/bioinformatics/btaf265","pmid":"https://pubmed.ncbi.nlm.nih.gov/40471703"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf265","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf265","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf265/63441544/btaf265.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf265/63441544/btaf265.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090273676","display_name":"Vanessa E. Kennedy","orcid":"https://orcid.org/0000-0002-1912-4076"},"institutions":[{"id":"https://openalex.org/I4210133340","display_name":"Stanford Blood Center","ror":"https://ror.org/03kezgr11","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210133340"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Vanessa E Kennedy","raw_affiliation_strings":["Division of Blood and Marrow Transplantation and Cellular Therapy, Department of Medicine, Stanford University , Stanford, CA, 94304,","Division of Blood and Marrow Transplantation and Cellular Therapy, Department of Medicine, Stanford University, Stanford, CA, 94304, United States"],"affiliations":[{"raw_affiliation_string":"Division of Blood and Marrow Transplantation and Cellular Therapy, Department of Medicine, Stanford University , Stanford, CA, 94304,","institution_ids":["https://openalex.org/I4210133340"]},{"raw_affiliation_string":"Division of Blood and Marrow Transplantation and Cellular Therapy, Department of Medicine, Stanford University, Stanford, CA, 94304, United States","institution_ids":["https://openalex.org/I4210133340"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077152188","display_name":"Ritu Roy","orcid":"https://orcid.org/0000-0003-2065-7846"},"institutions":[{"id":"https://openalex.org/I4210167126","display_name":"UCSF Helen Diller Family Comprehensive Cancer Center","ror":"https://ror.org/05yndxy10","country_code":"US","type":"facility","lineage":["https://openalex.org/I180670191","https://openalex.org/I4210110664","https://openalex.org/I4210167126"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ritu Roy","raw_affiliation_strings":["Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco , San Francisco, CA, 94158,","Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, 94158, United States"],"affiliations":[{"raw_affiliation_string":"Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco , San Francisco, CA, 94158,","institution_ids":["https://openalex.org/I4210167126"]},{"raw_affiliation_string":"Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, 94158, United States","institution_ids":["https://openalex.org/I4210167126"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034417710","display_name":"Cheryl A.C. Peretz","orcid":null},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I4210167126","display_name":"UCSF Helen Diller Family Comprehensive Cancer Center","ror":"https://ror.org/05yndxy10","country_code":"US","type":"facility","lineage":["https://openalex.org/I180670191","https://openalex.org/I4210110664","https://openalex.org/I4210167126"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cheryl A C Peretz","raw_affiliation_strings":["Division of Hematology and Oncology, Department of Pediatrics, University of California San Francisco , San Francisco, CA, 94143,","Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco , San Francisco, CA, 94158,","Division of Hematology and Oncology, Department of Pediatrics, University of California San Francisco, San Francisco, CA, 94143, United States","Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, 94158, United States"],"affiliations":[{"raw_affiliation_string":"Division of Hematology and Oncology, Department of Pediatrics, University of California San Francisco , San Francisco, CA, 94143,","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco , San Francisco, CA, 94158,","institution_ids":["https://openalex.org/I4210167126"]},{"raw_affiliation_string":"Division of Hematology and Oncology, Department of Pediatrics, University of California San Francisco, San Francisco, CA, 94143, United States","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, 94158, United States","institution_ids":["https://openalex.org/I4210167126"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004828733","display_name":"Andrew Koh","orcid":null},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Koh","raw_affiliation_strings":["Division of Hematology and Oncology, Department of Medicine, University of California San Francisco , San Francisco, CA, 94143,","Division of Hematology and Oncology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, United States"],"affiliations":[{"raw_affiliation_string":"Division of Hematology and Oncology, Department of Medicine, University of California San Francisco , San Francisco, CA, 94143,","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Division of Hematology and Oncology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, United States","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021636620","display_name":"Elaine Tran","orcid":"https://orcid.org/0009-0000-5370-7788"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elaine Tran","raw_affiliation_strings":["Division of Hematology and Oncology, Department of Medicine, University of California San Francisco , San Francisco, CA, 94143,","Division of Hematology and Oncology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, United States"],"affiliations":[{"raw_affiliation_string":"Division of Hematology and Oncology, Department of Medicine, University of California San Francisco , San Francisco, CA, 94143,","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Division of Hematology and Oncology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, United States","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091814150","display_name":"Catherine C. Smith","orcid":"https://orcid.org/0000-0003-0160-7026"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I4210167126","display_name":"UCSF Helen Diller Family Comprehensive Cancer Center","ror":"https://ror.org/05yndxy10","country_code":"US","type":"facility","lineage":["https://openalex.org/I180670191","https://openalex.org/I4210110664","https://openalex.org/I4210167126"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Catherine C Smith","raw_affiliation_strings":["Division of Hematology and Oncology, Department of Medicine, University of California San Francisco , San Francisco, CA, 94143,","Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco , San Francisco, CA, 94158,","Division of Hematology and Oncology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, United States","Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, 94158, United States"],"affiliations":[{"raw_affiliation_string":"Division of Hematology and Oncology, Department of Medicine, University of California San Francisco , San Francisco, CA, 94143,","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco , San Francisco, CA, 94158,","institution_ids":["https://openalex.org/I4210167126"]},{"raw_affiliation_string":"Division of Hematology and Oncology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, United States","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, 94158, United States","institution_ids":["https://openalex.org/I4210167126"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016883047","display_name":"Adam B. Olshen","orcid":"https://orcid.org/0000-0002-8998-4514"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I4210167126","display_name":"UCSF Helen Diller Family Comprehensive Cancer Center","ror":"https://ror.org/05yndxy10","country_code":"US","type":"facility","lineage":["https://openalex.org/I180670191","https://openalex.org/I4210110664","https://openalex.org/I4210167126"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Adam B Olshen","raw_affiliation_strings":["Division of Epidemiology and Biostatistics, University of California San Francisco , San Francisco, CA, 94143,","Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco , San Francisco, CA, 94158,","Division of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, 94143, United States","Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, 94158, United States"],"affiliations":[{"raw_affiliation_string":"Division of Epidemiology and Biostatistics, University of California San Francisco , San Francisco, CA, 94143,","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco , San Francisco, CA, 94158,","institution_ids":["https://openalex.org/I4210167126"]},{"raw_affiliation_string":"Division of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, 94143, United States","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Hellen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, 94158, United States","institution_ids":["https://openalex.org/I4210167126"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5090273676"],"corresponding_institution_ids":["https://openalex.org/I4210133340"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.5251,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.82409527,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":"41","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9779000282287598,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.7161005139350891},{"id":"https://openalex.org/keywords/multiplexing","display_name":"Multiplexing","score":0.6805009245872498},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.608029842376709},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5009138584136963},{"id":"https://openalex.org/keywords/sorting","display_name":"Sorting","score":0.47504639625549316},{"id":"https://openalex.org/keywords/snp-array","display_name":"SNP array","score":0.4714839458465576},{"id":"https://openalex.org/keywords/multiplex","display_name":"Multiplex","score":0.4440305233001709},{"id":"https://openalex.org/keywords/snp","display_name":"SNP","score":0.43273210525512695},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.42519426345825195},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.3499593734741211},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3180185556411743},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.26809757947921753},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17003211379051208},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.16544809937477112},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.13763678073883057}],"concepts":[{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.7161005139350891},{"id":"https://openalex.org/C19275194","wikidata":"https://www.wikidata.org/wiki/Q222903","display_name":"Multiplexing","level":2,"score":0.6805009245872498},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.608029842376709},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5009138584136963},{"id":"https://openalex.org/C111696304","wikidata":"https://www.wikidata.org/wiki/Q2303697","display_name":"Sorting","level":2,"score":0.47504639625549316},{"id":"https://openalex.org/C122060243","wikidata":"https://www.wikidata.org/wiki/Q7391885","display_name":"SNP array","level":5,"score":0.4714839458465576},{"id":"https://openalex.org/C2781188995","wikidata":"https://www.wikidata.org/wiki/Q6934982","display_name":"Multiplex","level":2,"score":0.4440305233001709},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.43273210525512695},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.42519426345825195},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.3499593734741211},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3180185556411743},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.26809757947921753},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17003211379051208},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.16544809937477112},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.13763678073883057},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007938","descriptor_name":"Leukemia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007938","descriptor_name":"Leukemia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf265","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf265","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf265/63441544/btaf265.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40471703","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40471703","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12208073","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12208073","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf265","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf265","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf265/63441544/btaf265.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2342450115","display_name":null,"funder_award_id":"P30CA082103","funder_id":"https://openalex.org/F4320332622","funder_display_name":"University of California, San Francisco"},{"id":"https://openalex.org/G3295524100","display_name":null,"funder_award_id":"CA082103","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5121723548","display_name":null,"funder_award_id":"1S10OD028511-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G658891627","display_name":null,"funder_award_id":"Scholar","funder_id":"https://openalex.org/F4320308295","funder_display_name":"Leukemia and Lymphoma Society"},{"id":"https://openalex.org/G7809553560","display_name":null,"funder_award_id":"Leukemia","funder_id":"https://openalex.org/F4320308295","funder_display_name":"Leukemia and Lymphoma Society"},{"id":"https://openalex.org/G8022820296","display_name":null,"funder_award_id":"1S10OD0","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8881677771","display_name":null,"funder_award_id":"P30CA082103","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8972793295","display_name":null,"funder_award_id":"CI-99-18","funder_id":"https://openalex.org/F4320306271","funder_display_name":"Damon Runyon Cancer Research Foundation"}],"funders":[{"id":"https://openalex.org/F4320306271","display_name":"Damon Runyon Cancer Research Foundation","ror":"https://ror.org/01gd7b947"},{"id":"https://openalex.org/F4320308295","display_name":"Leukemia and Lymphoma Society","ror":"https://ror.org/04m0xav37"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332622","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4411056727.pdf","grobid_xml":"https://content.openalex.org/works/W4411056727.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W2004232113","https://openalex.org/W2023178384","https://openalex.org/W2088173470","https://openalex.org/W2133174470","https://openalex.org/W2168133698","https://openalex.org/W2346273585","https://openalex.org/W2572662684","https://openalex.org/W2596362587","https://openalex.org/W2617653607","https://openalex.org/W2739492614","https://openalex.org/W2774307122","https://openalex.org/W2784882604","https://openalex.org/W2785085486","https://openalex.org/W2886125669","https://openalex.org/W2946259536","https://openalex.org/W2946902586","https://openalex.org/W2951068818","https://openalex.org/W2980515223","https://openalex.org/W2995043840","https://openalex.org/W2997393200","https://openalex.org/W3015416694","https://openalex.org/W3023290106","https://openalex.org/W3023456235","https://openalex.org/W3093815480","https://openalex.org/W3094802395","https://openalex.org/W3134217762","https://openalex.org/W3135058394","https://openalex.org/W3164980048","https://openalex.org/W3169274538","https://openalex.org/W3180955285","https://openalex.org/W4225731526","https://openalex.org/W4225965289","https://openalex.org/W4289785475","https://openalex.org/W4310103494","https://openalex.org/W4386882999","https://openalex.org/W4402633329"],"related_works":["https://openalex.org/W4285192699","https://openalex.org/W3095544300","https://openalex.org/W2020118226","https://openalex.org/W2579378686","https://openalex.org/W2508090146","https://openalex.org/W66951175","https://openalex.org/W2135364516","https://openalex.org/W1971066806","https://openalex.org/W1972112058","https://openalex.org/W1975573460"],"abstract_inverted_index":{"SNACS":[0],"is":[1],"available":[2],"at":[3],"https://github.com/olshena/SNACS.":[4]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-06-06T00:00:00"}
