{"id":"https://openalex.org/W4406924440","doi":"https://doi.org/10.1093/bioinformatics/btaf038","title":"CRAmed: a conditional randomization test for high-dimensional mediation analysis in sparse microbiome data","display_name":"CRAmed: a conditional randomization test for high-dimensional mediation analysis in sparse microbiome data","publication_year":2025,"publication_date":"2025-01-28","ids":{"openalex":"https://openalex.org/W4406924440","doi":"https://doi.org/10.1093/bioinformatics/btaf038","pmid":"https://pubmed.ncbi.nlm.nih.gov/39880365"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf038","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf038","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/41/2/btaf038/61686006/btaf038.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/41/2/btaf038/61686006/btaf038.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Tiantian Liu","orcid":"https://orcid.org/0009-0009-4207-8651"},"institutions":[{"id":"https://openalex.org/I161716053","display_name":"China Pharmaceutical University","ror":"https://ror.org/01sfm2718","country_code":"CN","type":"education","lineage":["https://openalex.org/I161716053"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tiantian Liu","raw_affiliation_strings":["Research Center of Biostatistics and Computational Pharmacy, China Pharmaceutical University , Jiangsu 211198,","China Pharmaceutical University Research Center of Biostatistics and Computational Pharmacy, , Jiangsu 211198,"],"affiliations":[{"raw_affiliation_string":"Research Center of Biostatistics and Computational Pharmacy, China Pharmaceutical University , Jiangsu 211198,","institution_ids":["https://openalex.org/I161716053"]},{"raw_affiliation_string":"China Pharmaceutical University Research Center of Biostatistics and Computational Pharmacy, , Jiangsu 211198,","institution_ids":["https://openalex.org/I161716053"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017021107","display_name":"Xiangnan Xu","orcid":"https://orcid.org/0000-0002-1910-6126"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Xiangnan Xu","raw_affiliation_strings":["Chair of Statistics, Humboldt-Universit\u00e4t zu Berlin , Berlin 10099,","Humboldt-Universit\u00e4t zu Berlin Chair of Statistics, , Berlin, 10099,"],"affiliations":[{"raw_affiliation_string":"Chair of Statistics, Humboldt-Universit\u00e4t zu Berlin , Berlin 10099,","institution_ids":["https://openalex.org/I39343248"]},{"raw_affiliation_string":"Humboldt-Universit\u00e4t zu Berlin Chair of Statistics, , Berlin, 10099,","institution_ids":["https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Tao Wang","orcid":"https://orcid.org/0000-0002-1218-4017"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Wang","raw_affiliation_strings":["Department of Statistics, School of Mathematical Sciences, Shanghai Jiao Tong University , Shanghai 200240,","MOE-LSC & CMA-Shanghai, Shanghai Jiao Tong University , Shanghai 200240,","MoE Key Lab of Artificial Intelligence, AI Institute, Shanghai Jiao Tong University , Shanghai 200240,","SJTU-Yale Joint Center of Biostatistics and Data Science, Shanghai Jiao Tong University , Shanghai 200240,","MOE-LSC & CMA-Shanghai, Shanghai Jiao Tong University , Shanghai, 200240,","MoE Key Lab of Artificial Intelligence, AI Institute, Shanghai Jiao Tong University , Shanghai, 200240,","Shanghai Jiao Tong University SJTU-Yale Joint Center of Biostatistics and Data Science, , Shanghai, 200240,","Shanghai Jiao Tong University Department of Statistics, School of Mathematical Sciences, , Shanghai, 200240,"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, School of Mathematical Sciences, Shanghai Jiao Tong University , Shanghai 200240,","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"MOE-LSC & CMA-Shanghai, Shanghai Jiao Tong University , Shanghai 200240,","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"MoE Key Lab of Artificial Intelligence, AI Institute, Shanghai Jiao Tong University , Shanghai 200240,","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"SJTU-Yale Joint Center of Biostatistics and Data Science, Shanghai Jiao Tong University , Shanghai 200240,","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"MOE-LSC & CMA-Shanghai, Shanghai Jiao Tong University , Shanghai, 200240,","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"MoE Key Lab of Artificial Intelligence, AI Institute, Shanghai Jiao Tong University , Shanghai, 200240,","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"Shanghai Jiao Tong University SJTU-Yale Joint Center of Biostatistics and Data Science, , Shanghai, 200240,","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"Shanghai Jiao Tong University Department of Statistics, School of Mathematical Sciences, , Shanghai, 200240,","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101145240","display_name":"Peirong Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peirong Xu","raw_affiliation_strings":["Department of Statistics, School of Mathematical Sciences, Shanghai Jiao Tong University , Shanghai 200240,","Shanghai Jiao Tong University Department of Statistics, School of Mathematical Sciences, , Shanghai, 200240,"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, School of Mathematical Sciences, Shanghai Jiao Tong University , Shanghai 200240,","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"Shanghai Jiao Tong University Department of Statistics, School of Mathematical Sciences, , Shanghai, 200240,","institution_ids":["https://openalex.org/I183067930"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I161716053"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.01268098,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"41","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.980400025844574,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.980400025844574,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9531999826431274,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9078999757766724,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/randomization","display_name":"Randomization","score":0.5629807710647583},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5549206137657166},{"id":"https://openalex.org/keywords/mediation","display_name":"Mediation","score":0.5473825335502625},{"id":"https://openalex.org/keywords/test","display_name":"Test (biology)","score":0.5248078107833862},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.4762587547302246},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.38858291506767273},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33893710374832153},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.33283519744873047},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.19489997625350952},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1934088170528412},{"id":"https://openalex.org/keywords/clinical-trial","display_name":"Clinical trial","score":0.15515494346618652}],"concepts":[{"id":"https://openalex.org/C204243189","wikidata":"https://www.wikidata.org/wiki/Q1363085","display_name":"Randomization","level":3,"score":0.5629807710647583},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5549206137657166},{"id":"https://openalex.org/C179420905","wikidata":"https://www.wikidata.org/wiki/Q223871","display_name":"Mediation","level":2,"score":0.5473825335502625},{"id":"https://openalex.org/C2777267654","wikidata":"https://www.wikidata.org/wiki/Q3519023","display_name":"Test (biology)","level":2,"score":0.5248078107833862},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.4762587547302246},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.38858291506767273},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33893710374832153},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.33283519744873047},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.19489997625350952},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1934088170528412},{"id":"https://openalex.org/C535046627","wikidata":"https://www.wikidata.org/wiki/Q30612","display_name":"Clinical trial","level":2,"score":0.15515494346618652},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000081983","descriptor_name":"Mediation Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf038","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf038","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/41/2/btaf038/61686006/btaf038.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39880365","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39880365","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11821267","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11821267","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11821267/pdf/btaf038.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf038","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf038","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/41/2/btaf038/61686006/btaf038.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G197011403","display_name":null,"funder_award_id":"12222111","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G202793077","display_name":null,"funder_award_id":"24BTJ060","funder_id":"https://openalex.org/F4320335869","funder_display_name":"National Social Science Fund of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2376276132","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3744313044","display_name":null,"funder_award_id":"Social","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G391238517","display_name":null,"funder_award_id":", and","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4766654764","display_name":null,"funder_award_id":"12331009","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5283801799","display_name":null,"funder_award_id":"82404380","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6700523250","display_name":null,"funder_award_id":"YG2023QNA28","funder_id":"https://openalex.org/F4320322999","funder_display_name":"Shanghai Jiao Tong University"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321542","display_name":"China Pharmaceutical University","ror":"https://ror.org/01sfm2718"},{"id":"https://openalex.org/F4320322999","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320335869","display_name":"National Social Science Fund of China","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4406924440.pdf","grobid_xml":"https://content.openalex.org/works/W4406924440.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W1528349055","https://openalex.org/W1929501557","https://openalex.org/W1937592784","https://openalex.org/W1968105193","https://openalex.org/W2003836872","https://openalex.org/W2009754435","https://openalex.org/W2010143351","https://openalex.org/W2019139715","https://openalex.org/W2061693044","https://openalex.org/W2068719957","https://openalex.org/W2103764963","https://openalex.org/W2117689823","https://openalex.org/W2155860422","https://openalex.org/W2193561325","https://openalex.org/W2428833938","https://openalex.org/W2463836225","https://openalex.org/W2467200611","https://openalex.org/W2474105078","https://openalex.org/W2587530089","https://openalex.org/W2728822570","https://openalex.org/W2769145826","https://openalex.org/W2803457956","https://openalex.org/W2807747040","https://openalex.org/W2887509155","https://openalex.org/W2897255377","https://openalex.org/W2941090757","https://openalex.org/W2952076147","https://openalex.org/W2964204760","https://openalex.org/W2966002431","https://openalex.org/W2990439639","https://openalex.org/W2995752611","https://openalex.org/W2998718302","https://openalex.org/W3009785627","https://openalex.org/W3086214339","https://openalex.org/W3091444640","https://openalex.org/W3101910825","https://openalex.org/W3111425205","https://openalex.org/W3116220988","https://openalex.org/W3127664280","https://openalex.org/W3155171346","https://openalex.org/W3179102185","https://openalex.org/W3195320902","https://openalex.org/W4229010929","https://openalex.org/W4280518873","https://openalex.org/W4282944594","https://openalex.org/W4287307313","https://openalex.org/W4292811746","https://openalex.org/W4320486556","https://openalex.org/W4362633588","https://openalex.org/W4380758663","https://openalex.org/W4382788134","https://openalex.org/W4385240643"],"related_works":["https://openalex.org/W2604155846","https://openalex.org/W4390658901","https://openalex.org/W3121185202","https://openalex.org/W4393043634","https://openalex.org/W4206185765","https://openalex.org/W2900546243","https://openalex.org/W3035180550","https://openalex.org/W4388834263","https://openalex.org/W1983943311","https://openalex.org/W3088497233"],"abstract_inverted_index":{"The":[0],"R":[1],"package":[2],"CRAmed":[3],"implementing":[4],"the":[5],"proposed":[6],"methods":[7],"is":[8],"available":[9],"online":[10],"at":[11],"https://github.com/liudoubletian/CRAmed.":[12]},"counts_by_year":[],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2025-10-10T00:00:00"}
