{"id":"https://openalex.org/W4403480075","doi":"https://doi.org/10.1093/bioinformatics/btae626","title":"Deep learning-based enhancement of fluorescence labeling for accurate cell lineage tracing during embryogenesis","display_name":"Deep learning-based enhancement of fluorescence labeling for accurate cell lineage tracing during embryogenesis","publication_year":2024,"publication_date":"2024-10-17","ids":{"openalex":"https://openalex.org/W4403480075","doi":"https://doi.org/10.1093/bioinformatics/btae626","pmid":"https://pubmed.ncbi.nlm.nih.gov/39418183"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae626","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae626","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bioinformatics/btae626","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028838918","display_name":"Zelin Li","orcid":"https://orcid.org/0000-0002-0985-8420"},"institutions":[{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]},{"id":"https://openalex.org/I2800906782","display_name":"Hong Kong Science and Technology Parks Corporation","ror":"https://ror.org/05q8mqd91","country_code":"HK","type":"nonprofit","lineage":["https://openalex.org/I2800906782"]}],"countries":["HK"],"is_corresponding":true,"raw_author_name":"Zelin Li","raw_affiliation_strings":["Centre for Intelligent Multidimensional Data Analysis, Hong Kong Science Park , Hong Kong 999077,","Department of Electrical Engineering, City University of Hong Kong , Hong Kong 999077,"],"affiliations":[{"raw_affiliation_string":"Centre for Intelligent Multidimensional Data Analysis, Hong Kong Science Park , Hong Kong 999077,","institution_ids":["https://openalex.org/I2800906782"]},{"raw_affiliation_string":"Department of Electrical Engineering, City University of Hong Kong , Hong Kong 999077,","institution_ids":["https://openalex.org/I168719708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068255173","display_name":"Dongying Xie","orcid":"https://orcid.org/0000-0002-9600-7084"},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Dongying Xie","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong 999077,"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong 999077,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059742826","display_name":"Yiming Ma","orcid":"https://orcid.org/0000-0001-6937-1924"},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Yiming Ma","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong 999077,"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong 999077,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025336901","display_name":"Cunmin Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Cunmin Zhao","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong 999077,"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong 999077,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114235338","display_name":"Sicheng You","orcid":null},"institutions":[{"id":"https://openalex.org/I2800906782","display_name":"Hong Kong Science and Technology Parks Corporation","ror":"https://ror.org/05q8mqd91","country_code":"HK","type":"nonprofit","lineage":["https://openalex.org/I2800906782"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Sicheng You","raw_affiliation_strings":["Centre for Intelligent Multidimensional Data Analysis, Hong Kong Science Park , Hong Kong 999077,"],"affiliations":[{"raw_affiliation_string":"Centre for Intelligent Multidimensional Data Analysis, Hong Kong Science Park , Hong Kong 999077,","institution_ids":["https://openalex.org/I2800906782"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100644375","display_name":"Hong Yan","orcid":"https://orcid.org/0000-0001-9661-3095"},"institutions":[{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]},{"id":"https://openalex.org/I2800906782","display_name":"Hong Kong Science and Technology Parks Corporation","ror":"https://ror.org/05q8mqd91","country_code":"HK","type":"nonprofit","lineage":["https://openalex.org/I2800906782"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Hong Yan","raw_affiliation_strings":["Centre for Intelligent Multidimensional Data Analysis, Hong Kong Science Park , Hong Kong 999077,","Department of Electrical Engineering, City University of Hong Kong , Hong Kong 999077,"],"affiliations":[{"raw_affiliation_string":"Centre for Intelligent Multidimensional Data Analysis, Hong Kong Science Park , Hong Kong 999077,","institution_ids":["https://openalex.org/I2800906782"]},{"raw_affiliation_string":"Department of Electrical Engineering, City University of Hong Kong , Hong Kong 999077,","institution_ids":["https://openalex.org/I168719708"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033328883","display_name":"Zhongying Zhao","orcid":"https://orcid.org/0000-0003-2743-9008"},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Zhongying Zhao","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong 999077,"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong 999077,","institution_ids":["https://openalex.org/I141568987"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5028838918"],"corresponding_institution_ids":["https://openalex.org/I168719708","https://openalex.org/I2800906782"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.6478,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.80805899,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"40","issue":"11","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9039000272750854,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9039000272750854,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.7290940880775452},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5913467407226562},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5008416175842285},{"id":"https://openalex.org/keywords/embryogenesis","display_name":"Embryogenesis","score":0.49201270937919617},{"id":"https://openalex.org/keywords/fluorescence","display_name":"Fluorescence","score":0.46283769607543945},{"id":"https://openalex.org/keywords/lineage","display_name":"Lineage (genetic)","score":0.43714383244514465},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3913041949272156},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3729649782180786},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.321992963552475},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.32161208987236023},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.29061269760131836},{"id":"https://openalex.org/keywords/embryo","display_name":"Embryo","score":0.285491406917572},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.2816486954689026},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2684691846370697},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.12974649667739868},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12510472536087036},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11837279796600342},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.06996679306030273},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.06287890672683716}],"concepts":[{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.7290940880775452},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5913467407226562},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5008416175842285},{"id":"https://openalex.org/C87073359","wikidata":"https://www.wikidata.org/wiki/Q33196","display_name":"Embryogenesis","level":3,"score":0.49201270937919617},{"id":"https://openalex.org/C91881484","wikidata":"https://www.wikidata.org/wiki/Q191807","display_name":"Fluorescence","level":2,"score":0.46283769607543945},{"id":"https://openalex.org/C2776817793","wikidata":"https://www.wikidata.org/wiki/Q6553369","display_name":"Lineage (genetic)","level":3,"score":0.43714383244514465},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3913041949272156},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3729649782180786},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.321992963552475},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.32161208987236023},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.29061269760131836},{"id":"https://openalex.org/C196843134","wikidata":"https://www.wikidata.org/wiki/Q33196","display_name":"Embryo","level":2,"score":0.285491406917572},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.2816486954689026},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2684691846370697},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.12974649667739868},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12510472536087036},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11837279796600342},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.06996679306030273},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.06287890672683716}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":true},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":true},{"descriptor_ui":"D019070","descriptor_name":"Cell Lineage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019070","descriptor_name":"Cell Lineage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019070","descriptor_name":"Cell Lineage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019070","descriptor_name":"Cell Lineage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019070","descriptor_name":"Cell Lineage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019070","descriptor_name":"Cell Lineage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047108","descriptor_name":"Embryonic Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047108","descriptor_name":"Embryonic Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047108","descriptor_name":"Embryonic Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047108","descriptor_name":"Embryonic Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047108","descriptor_name":"Embryonic Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047108","descriptor_name":"Embryonic Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059629","descriptor_name":"Signal-To-Noise Ratio","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059629","descriptor_name":"Signal-To-Noise Ratio","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059629","descriptor_name":"Signal-To-Noise Ratio","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059629","descriptor_name":"Signal-To-Noise Ratio","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059629","descriptor_name":"Signal-To-Noise Ratio","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059629","descriptor_name":"Signal-To-Noise Ratio","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btae626","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae626","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39418183","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39418183","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pure.atira.dk:publications/e4e73f67-b7d7-4787-85de-8154e8973d03","is_oa":true,"landing_page_url":"https://hdl.handle.net/2031/e4e73f67-b7d7-4787-85de-8154e8973d03","pdf_url":"https://scholars.cityu.edu.hk/files/254594030/248971254.pdf","source":{"id":"https://openalex.org/S7407055387","display_name":"CityU Scholars","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Li, Z, Xie, D, Ma, Y, Zhao, C, You, S, Yan, H & Zhao, Z 2024, 'Deep learning-based enhancement of fluorescence labeling for accurate cell lineage tracing during embryogenesis', Bioinformatics, vol. 40, no. 11, btae626. https://doi.org/10.1093/bioinformatics/btae626","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11549013","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11549013","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11549013/pdf/btae626.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae626","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae626","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4512861443","display_name":null,"funder_award_id":"GHP/176/21SZ","funder_id":"https://openalex.org/F4320324196","funder_display_name":"Innovation and Technology Commission - Hong Kong"},{"id":"https://openalex.org/G5342890036","display_name":null,"funder_award_id":"HKBU12101522","funder_id":"https://openalex.org/F4320320955","funder_display_name":"Hong Kong Baptist University"},{"id":"https://openalex.org/G637587015","display_name":null,"funder_award_id":"HKBU12101520","funder_id":"https://openalex.org/F4320320955","funder_display_name":"Hong Kong Baptist University"},{"id":"https://openalex.org/G7379467243","display_name":null,"funder_award_id":"FNRA-IG/21-22/SCI_02","funder_id":"https://openalex.org/F4320320955","funder_display_name":"Hong Kong Baptist University"}],"funders":[{"id":"https://openalex.org/F4320320955","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131"},{"id":"https://openalex.org/F4320324196","display_name":"Innovation and Technology Commission - Hong Kong","ror":"https://ror.org/04vf9tr09"},{"id":"https://openalex.org/F4320326427","display_name":"Innovation and Technology Fund","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":53,"referenced_works":["https://openalex.org/W1488457991","https://openalex.org/W1647075334","https://openalex.org/W1944127002","https://openalex.org/W1946839802","https://openalex.org/W1969697456","https://openalex.org/W1971572255","https://openalex.org/W1972102879","https://openalex.org/W1979826378","https://openalex.org/W1989952069","https://openalex.org/W1991839252","https://openalex.org/W1997726409","https://openalex.org/W2000396646","https://openalex.org/W2019199702","https://openalex.org/W2022346360","https://openalex.org/W2091733078","https://openalex.org/W2403688190","https://openalex.org/W2757339117","https://openalex.org/W2798446563","https://openalex.org/W2896103138","https://openalex.org/W2910588892","https://openalex.org/W3111747495","https://openalex.org/W3183190110","https://openalex.org/W3185631395","https://openalex.org/W3185784360","https://openalex.org/W3214341251","https://openalex.org/W4224837766","https://openalex.org/W4232322096","https://openalex.org/W4281877006","https://openalex.org/W4291250580","https://openalex.org/W4294636758","https://openalex.org/W4328049322","https://openalex.org/W4388841062","https://openalex.org/W6636843522","https://openalex.org/W6640763037","https://openalex.org/W6642603014","https://openalex.org/W6643117319","https://openalex.org/W6643524849","https://openalex.org/W6649646981","https://openalex.org/W6655175838","https://openalex.org/W6673582378","https://openalex.org/W6740257014","https://openalex.org/W6744528321","https://openalex.org/W6750159769","https://openalex.org/W6755377748","https://openalex.org/W6757926811","https://openalex.org/W6787160546","https://openalex.org/W6798392703","https://openalex.org/W6798551511","https://openalex.org/W6799286480","https://openalex.org/W6810375861","https://openalex.org/W6814746623","https://openalex.org/W6838829212","https://openalex.org/W6850539358"],"related_works":["https://openalex.org/W2382309260","https://openalex.org/W2888673113","https://openalex.org/W2369913389","https://openalex.org/W2506149209","https://openalex.org/W1968431014","https://openalex.org/W2352153050","https://openalex.org/W2056065966","https://openalex.org/W2352602608","https://openalex.org/W2062641654","https://openalex.org/W2353900815"],"abstract_inverted_index":{"All":[0],"images":[1],"and":[2,10],"data":[3],"are":[4,13],"available":[5,14],"at":[6,15],"https://doi.org/10.6084/m9.figshare.26778475.v1.":[7],"The":[8],"code":[9],"user-friendly":[11],"software":[12],"https://github.com/plcx/NucApp-develop.":[16]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
