{"id":"https://openalex.org/W4386623830","doi":"https://doi.org/10.1093/bioinformatics/btad450","title":"Cardinality optimization in constraint-based modelling: application to human metabolism","display_name":"Cardinality optimization in constraint-based modelling: application to human metabolism","publication_year":2023,"publication_date":"2023-09-01","ids":{"openalex":"https://openalex.org/W4386623830","doi":"https://doi.org/10.1093/bioinformatics/btad450","pmid":"https://pubmed.ncbi.nlm.nih.gov/37697651"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad450","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/9/btad450/51517471/btad450.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/9/btad450/51517471/btad450.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069362994","display_name":"Ronan M. T. Fleming","orcid":"https://orcid.org/0000-0001-5346-9812"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I181231927","display_name":"National University of Ireland","ror":"https://ror.org/00shsf120","country_code":"IE","type":"education","lineage":["https://openalex.org/I181231927"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["IE","LU","NL"],"is_corresponding":true,"raw_author_name":"Ronan M T Fleming","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 6 avenue du Swing , Belvaux L-4362, Luxembourg","Metabolomics and Analytics Center, Leiden Academic Centre for Drug Research, Leiden University, Wassenaarseweg 76 , Leiden 2333 CC, The Netherlands","School of Medicine, National University of Ireland, University Rd , Galway H91 TK33, Ireland"],"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 6 avenue du Swing , Belvaux L-4362, Luxembourg","institution_ids":["https://openalex.org/I186903577"]},{"raw_affiliation_string":"Metabolomics and Analytics Center, Leiden Academic Centre for Drug Research, Leiden University, Wassenaarseweg 76 , Leiden 2333 CC, The Netherlands","institution_ids":["https://openalex.org/I121797337"]},{"raw_affiliation_string":"School of Medicine, National University of Ireland, University Rd , Galway H91 TK33, Ireland","institution_ids":["https://openalex.org/I181231927"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047777958","display_name":"Hulda S. Haraldsd\u00f3ttir","orcid":null},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Hulda S Haraldsdottir","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 6 avenue du Swing , Belvaux L-4362, Luxembourg"],"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 6 avenue du Swing , Belvaux L-4362, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067811159","display_name":"Hoai Minh Le","orcid":"https://orcid.org/0000-0001-7337-1505"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Le Hoai Minh","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 6 avenue du Swing , Belvaux L-4362, Luxembourg"],"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 6 avenue du Swing , Belvaux L-4362, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056072889","display_name":"Phan Tu Vuong","orcid":"https://orcid.org/0000-0002-1474-994X"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I43439940","display_name":"University of Southampton","ror":"https://ror.org/01ryk1543","country_code":"GB","type":"education","lineage":["https://openalex.org/I43439940"]}],"countries":["GB","LU"],"is_corresponding":false,"raw_author_name":"Phan Tu Vuong","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 6 avenue du Swing , Belvaux L-4362, Luxembourg","Mathematical Sciences School, University of Southampton, University Road , Southampton SO17 1BJ, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 6 avenue du Swing , Belvaux L-4362, Luxembourg","institution_ids":["https://openalex.org/I186903577"]},{"raw_affiliation_string":"Mathematical Sciences School, University of Southampton, University Road , Southampton SO17 1BJ, United Kingdom","institution_ids":["https://openalex.org/I43439940"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076255429","display_name":"Thomas Hankemeier","orcid":"https://orcid.org/0000-0001-7871-2073"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Thomas Hankemeier","raw_affiliation_strings":["Metabolomics and Analytics Center, Leiden Academic Centre for Drug Research, Leiden University, Wassenaarseweg 76 , Leiden 2333 CC, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Metabolomics and Analytics Center, Leiden Academic Centre for Drug Research, Leiden University, Wassenaarseweg 76 , Leiden 2333 CC, The Netherlands","institution_ids":["https://openalex.org/I121797337"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074725115","display_name":"Ines Thiele","orcid":"https://orcid.org/0000-0002-8071-7110"},"institutions":[{"id":"https://openalex.org/I181231927","display_name":"National University of Ireland","ror":"https://ror.org/00shsf120","country_code":"IE","type":"education","lineage":["https://openalex.org/I181231927"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Ines Thiele","raw_affiliation_strings":["School of Medicine, National University of Ireland, University Rd , Galway H91 TK33, Ireland"],"affiliations":[{"raw_affiliation_string":"School of Medicine, National University of Ireland, University Rd , Galway H91 TK33, Ireland","institution_ids":["https://openalex.org/I181231927"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5069362994"],"corresponding_institution_ids":["https://openalex.org/I121797337","https://openalex.org/I181231927","https://openalex.org/I186903577"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.3703,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.81281541,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"39","issue":"9","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11053","display_name":"Process Optimization and Integration","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10404","display_name":"Enzyme Catalysis and Immobilization","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cardinality","display_name":"Cardinality (data modeling)","score":0.6859007477760315},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.6391962766647339},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6337505578994751},{"id":"https://openalex.org/keywords/flux-balance-analysis","display_name":"Flux balance analysis","score":0.6051169633865356},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.5276442766189575},{"id":"https://openalex.org/keywords/optimization-problem","display_name":"Optimization problem","score":0.5261366367340088},{"id":"https://openalex.org/keywords/convex-optimization","display_name":"Convex optimization","score":0.4459131062030792},{"id":"https://openalex.org/keywords/constraint","display_name":"Constraint (computer-aided design)","score":0.4400281310081482},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.41124042868614197},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3912580609321594},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2622110843658447},{"id":"https://openalex.org/keywords/regular-polygon","display_name":"Regular polygon","score":0.23441043496131897},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.16614633798599243},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.09092885255813599},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.08940285444259644}],"concepts":[{"id":"https://openalex.org/C87117476","wikidata":"https://www.wikidata.org/wiki/Q362383","display_name":"Cardinality (data modeling)","level":2,"score":0.6859007477760315},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.6391962766647339},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6337505578994751},{"id":"https://openalex.org/C167091322","wikidata":"https://www.wikidata.org/wiki/Q5463029","display_name":"Flux balance analysis","level":2,"score":0.6051169633865356},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.5276442766189575},{"id":"https://openalex.org/C137836250","wikidata":"https://www.wikidata.org/wiki/Q984063","display_name":"Optimization problem","level":2,"score":0.5261366367340088},{"id":"https://openalex.org/C157972887","wikidata":"https://www.wikidata.org/wiki/Q463359","display_name":"Convex optimization","level":3,"score":0.4459131062030792},{"id":"https://openalex.org/C2776036281","wikidata":"https://www.wikidata.org/wiki/Q48769818","display_name":"Constraint (computer-aided design)","level":2,"score":0.4400281310081482},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.41124042868614197},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3912580609321594},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2622110843658447},{"id":"https://openalex.org/C112680207","wikidata":"https://www.wikidata.org/wiki/Q714886","display_name":"Regular polygon","level":2,"score":0.23441043496131897},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.16614633798599243},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.09092885255813599},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.08940285444259644},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btad450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad450","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/9/btad450/51517471/btad450.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37697651","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37697651","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:eprints.soton.ac.uk:482448","is_oa":true,"landing_page_url":null,"pdf_url":"https://eprints.soton.ac.uk/482448/1/btad450.pdf","source":{"id":"https://openalex.org/S4306401019","display_name":"ePrints Soton (University of Southampton)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I43439940","host_organization_name":"University of Southampton","host_organization_lineage":["https://openalex.org/I43439940"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10495685","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10495685","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10495685/pdf/btad450.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:scholarlypublications.universiteitleiden.nl:item_3677049","is_oa":true,"landing_page_url":"https://hdl.handle.net/1887/3677049","pdf_url":"https://scholarlypublications.universiteitleiden.nl/access/item%3A3677050/view","source":{"id":"https://openalex.org/S4306400850","display_name":"Leiden Repository (Leiden University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I121797337","host_organization_name":"Leiden University","host_organization_lineage":["https://openalex.org/I121797337"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Article / Letter to editor"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad450","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/9/btad450/51517471/btad450.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1087416387","display_name":null,"funder_award_id":"1U19AG063744-01","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G3719789328","display_name":null,"funder_award_id":"1RF1AG058942-01","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G8318064016","display_name":null,"funder_award_id":"Horizon","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321800","display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","ror":"https://ror.org/04jsz6e67"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320334322","display_name":"HORIZON EUROPE Framework Programme","ror":null},{"id":"https://openalex.org/F4320337337","display_name":"National Institute on Aging","ror":"https://ror.org/049v75w11"},{"id":"https://openalex.org/F4320337509","display_name":"Biological and Environmental Research","ror":"https://ror.org/0114b2m14"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4386623830.pdf"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W1562857671","https://openalex.org/W1588504519","https://openalex.org/W1829294359","https://openalex.org/W1975006876","https://openalex.org/W1998727374","https://openalex.org/W2003501808","https://openalex.org/W2008875008","https://openalex.org/W2009282793","https://openalex.org/W2029403511","https://openalex.org/W2030925767","https://openalex.org/W2034494369","https://openalex.org/W2046653743","https://openalex.org/W2047632644","https://openalex.org/W2067094344","https://openalex.org/W2074682976","https://openalex.org/W2075779886","https://openalex.org/W2078355959","https://openalex.org/W2078775934","https://openalex.org/W2085993965","https://openalex.org/W2102653059","https://openalex.org/W2102760656","https://openalex.org/W2104108767","https://openalex.org/W2105112252","https://openalex.org/W2107459209","https://openalex.org/W2115159982","https://openalex.org/W2123542593","https://openalex.org/W2124225314","https://openalex.org/W2132218677","https://openalex.org/W2135046866","https://openalex.org/W2136235822","https://openalex.org/W2143163931","https://openalex.org/W2144009916","https://openalex.org/W2150187794","https://openalex.org/W2161568599","https://openalex.org/W2162673839","https://openalex.org/W2167919951","https://openalex.org/W2292755335","https://openalex.org/W2418056440","https://openalex.org/W2538527935","https://openalex.org/W2559597060","https://openalex.org/W2587946751","https://openalex.org/W2762019694","https://openalex.org/W2789128799","https://openalex.org/W2963769561","https://openalex.org/W2996576365","https://openalex.org/W3010629926","https://openalex.org/W3013554928","https://openalex.org/W3029912146","https://openalex.org/W3138245369","https://openalex.org/W4235508806","https://openalex.org/W6675376083","https://openalex.org/W6678356451","https://openalex.org/W7073975061"],"related_works":["https://openalex.org/W2756132392","https://openalex.org/W3035814349","https://openalex.org/W2084892497","https://openalex.org/W4285101096","https://openalex.org/W4320477335","https://openalex.org/W2518949622","https://openalex.org/W4382725876","https://openalex.org/W2115614142","https://openalex.org/W2275184629","https://openalex.org/W1561889708"],"abstract_inverted_index":{"Open":[0],"source":[1],"scripts":[2],"to":[3],"reproduce":[4],"the":[5,16],"results":[6],"are":[7],"here":[8],"https://github.com/opencobra/COBRA.papers/2023_cardOpt":[9],"with":[10],"general":[11],"purpose":[12],"functions":[13],"integrated":[14],"within":[15],"COnstraint-Based":[17],"Reconstruction":[18],"and":[19],"Analysis":[20],"toolbox:":[21],"https://github.com/opencobra/cobratoolbox.":[22]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
