{"id":"https://openalex.org/W4294668246","doi":"https://doi.org/10.1093/bioinformatics/btac603","title":"ABEILLE: a novel method for ABerrant Expression Identification empLoying machine LEarning\u00a0from RNA-sequencing data","display_name":"ABEILLE: a novel method for ABerrant Expression Identification empLoying machine LEarning\u00a0from RNA-sequencing data","publication_year":2022,"publication_date":"2022-09-05","ids":{"openalex":"https://openalex.org/W4294668246","doi":"https://doi.org/10.1093/bioinformatics/btac603","pmid":"https://pubmed.ncbi.nlm.nih.gov/36063052"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac603","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac603","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/20/4754/46535003/btac603.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/20/4754/46535003/btac603.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021780984","display_name":"Justine Labory","orcid":null},"institutions":[{"id":"https://openalex.org/I3018988418","display_name":"Centre Hospitalier Universitaire de Nice","ror":"https://ror.org/05qsjq305","country_code":"FR","type":"funder","lineage":["https://openalex.org/I3018988418"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210119200","display_name":"Institut de Recherche sur le Cancer et le Vieillissement de Nice","ror":"https://ror.org/01td3kv81","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210119200"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Justine Labory","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France","Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France","institution_ids":["https://openalex.org/I201841394"]},{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France","institution_ids":["https://openalex.org/I4210119200","https://openalex.org/I3018988418","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I154526488"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076877796","display_name":"Gwendal Le Bideau","orcid":null},"institutions":[{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I3018988418","display_name":"Centre Hospitalier Universitaire de Nice","ror":"https://ror.org/05qsjq305","country_code":"FR","type":"funder","lineage":["https://openalex.org/I3018988418"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210119200","display_name":"Institut de Recherche sur le Cancer et le Vieillissement de Nice","ror":"https://ror.org/01td3kv81","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210119200"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Gwendal Le Bideau","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France","institution_ids":["https://openalex.org/I4210119200","https://openalex.org/I3018988418","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I154526488"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000924490","display_name":"David Pratella","orcid":"https://orcid.org/0000-0001-6510-2268"},"institutions":[{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"David Pratella","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France","institution_ids":["https://openalex.org/I201841394"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089190951","display_name":"Jean-Elis\u00e9e Yao","orcid":null},"institutions":[{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Elis\u00e9e Yao","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France","institution_ids":["https://openalex.org/I201841394"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059000804","display_name":"Samira Ait\u2010El\u2010Mkadem Saadi","orcid":"https://orcid.org/0000-0001-7204-7826"},"institutions":[{"id":"https://openalex.org/I4210119200","display_name":"Institut de Recherche sur le Cancer et le Vieillissement de Nice","ror":"https://ror.org/01td3kv81","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210119200"]},{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I3018988418","display_name":"Centre Hospitalier Universitaire de Nice","ror":"https://ror.org/05qsjq305","country_code":"FR","type":"funder","lineage":["https://openalex.org/I3018988418"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Samira Ait-El-Mkadem Saadi","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France","institution_ids":["https://openalex.org/I4210119200","https://openalex.org/I3018988418","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I154526488"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088299660","display_name":"Sylvie Bannwarth","orcid":"https://orcid.org/0000-0003-3960-8374"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210119200","display_name":"Institut de Recherche sur le Cancer et le Vieillissement de Nice","ror":"https://ror.org/01td3kv81","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210119200"]},{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I3018988418","display_name":"Centre Hospitalier Universitaire de Nice","ror":"https://ror.org/05qsjq305","country_code":"FR","type":"funder","lineage":["https://openalex.org/I3018988418"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sylvie Bannwarth","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France","institution_ids":["https://openalex.org/I4210119200","https://openalex.org/I3018988418","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I154526488"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018154096","display_name":"Loubna El-Hami","orcid":null},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210119200","display_name":"Institut de Recherche sur le Cancer et le Vieillissement de Nice","ror":"https://ror.org/01td3kv81","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210119200"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I3018988418","display_name":"Centre Hospitalier Universitaire de Nice","ror":"https://ror.org/05qsjq305","country_code":"FR","type":"funder","lineage":["https://openalex.org/I3018988418"]},{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Loubna El-Hami","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France","Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France","institution_ids":["https://openalex.org/I201841394"]},{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France","institution_ids":["https://openalex.org/I4210119200","https://openalex.org/I3018988418","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I154526488"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005212386","display_name":"V\u00e9ronique Paquis-Fluckinger","orcid":null},"institutions":[{"id":"https://openalex.org/I4210119200","display_name":"Institut de Recherche sur le Cancer et le Vieillissement de Nice","ror":"https://ror.org/01td3kv81","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210119200"]},{"id":"https://openalex.org/I3018988418","display_name":"Centre Hospitalier Universitaire de Nice","ror":"https://ror.org/05qsjq305","country_code":"FR","type":"funder","lineage":["https://openalex.org/I3018988418"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"V\u00e9ronique Paquis-Fluckinger","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Inserm U1081, CNRS UMR 7284, Institute for Research on Cancer and Aging, Nice (IRCAN), Centre Hospitalier Universitaire (CHU) de Nice , Nice 06200, France","institution_ids":["https://openalex.org/I4210119200","https://openalex.org/I3018988418","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I154526488"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046061566","display_name":"Silvia Bottini","orcid":"https://orcid.org/0000-0002-0605-4646"},"institutions":[{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Silvia Bottini","raw_affiliation_strings":["Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 C\u00f4te d\u2019Azur, Center of Modeling, Simulation and Interactions , Nice 06000, France","institution_ids":["https://openalex.org/I201841394"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5046061566"],"corresponding_institution_ids":["https://openalex.org/I201841394"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":2836,"currency":"EUR","value_usd":3058},"fwci":0.6066,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.64475549,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"38","issue":"20","first_page":"4754","last_page":"4761"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6892755627632141},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5776079893112183},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5029131770133972},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.49952054023742676},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45415085554122925},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.45221108198165894},{"id":"https://openalex.org/keywords/autoencoder","display_name":"Autoencoder","score":0.4476715624332428},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35636967420578003},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25264739990234375},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.19577643275260925},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08086296916007996},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.07223522663116455}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6892755627632141},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5776079893112183},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5029131770133972},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.49952054023742676},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45415085554122925},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.45221108198165894},{"id":"https://openalex.org/C101738243","wikidata":"https://www.wikidata.org/wiki/Q786435","display_name":"Autoencoder","level":3,"score":0.4476715624332428},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35636967420578003},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25264739990234375},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.19577643275260925},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08086296916007996},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.07223522663116455},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000073359","descriptor_name":"Exome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000073359","descriptor_name":"Exome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000073359","descriptor_name":"Exome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btac603","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac603","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/20/4754/46535003/btac603.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36063052","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36063052","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9563686","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9563686","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac603","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac603","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/20/4754/46535003/btac603.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","score":0.6200000047683716,"id":"https://metadata.un.org/sdg/16"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4294668246.pdf"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W1533942137","https://openalex.org/W1764005853","https://openalex.org/W1980589014","https://openalex.org/W1981509058","https://openalex.org/W2114104545","https://openalex.org/W2142772349","https://openalex.org/W2154866190","https://openalex.org/W2179438025","https://openalex.org/W2308074142","https://openalex.org/W2345356016","https://openalex.org/W2807841473","https://openalex.org/W2918907317","https://openalex.org/W2948477377","https://openalex.org/W2949444664","https://openalex.org/W2949982307","https://openalex.org/W2950545834","https://openalex.org/W2979935292","https://openalex.org/W2980062155","https://openalex.org/W3017021858","https://openalex.org/W3097562643","https://openalex.org/W3097791049","https://openalex.org/W3125383934","https://openalex.org/W4221068576","https://openalex.org/W4233918295"],"related_works":["https://openalex.org/W2159052453","https://openalex.org/W3013693939","https://openalex.org/W2566616303","https://openalex.org/W3131327266","https://openalex.org/W2752972570","https://openalex.org/W4297051394","https://openalex.org/W2734887215","https://openalex.org/W2803255133","https://openalex.org/W2909431601","https://openalex.org/W4294770367"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}