{"id":"https://openalex.org/W3156000544","doi":"https://doi.org/10.1093/bioinformatics/btac397","title":"Sequence tagging for biomedical extractive question answering","display_name":"Sequence tagging for biomedical extractive question answering","publication_year":2022,"publication_date":"2022-06-17","ids":{"openalex":"https://openalex.org/W3156000544","doi":"https://doi.org/10.1093/bioinformatics/btac397","mag":"3156000544","pmid":"https://pubmed.ncbi.nlm.nih.gov/35713500"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac397","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac397","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/15/3794/45213136/btac397.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/15/3794/45213136/btac397.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012809586","display_name":"Wonjin Yoon","orcid":"https://orcid.org/0000-0002-6435-548X"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Wonjin Yoon","raw_affiliation_strings":["Department of Computer Science and Engineering, Korea University , Seoul 02841, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Korea University , Seoul 02841, South Korea","institution_ids":["https://openalex.org/I197347611"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056159004","display_name":"Richard Jackson","orcid":"https://orcid.org/0000-0002-3278-8547"},"institutions":[{"id":"https://openalex.org/I105036370","display_name":"AstraZeneca (United Kingdom)","ror":"https://ror.org/04r9x1a08","country_code":"GB","type":"company","lineage":["https://openalex.org/I105036370"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Richard Jackson","raw_affiliation_strings":["AstraZeneca UK , Cambridge CB2 0AA, UK"],"affiliations":[{"raw_affiliation_string":"AstraZeneca UK , Cambridge CB2 0AA, UK","institution_ids":["https://openalex.org/I105036370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111019897","display_name":"Aron Lagerberg","orcid":null},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Aron Lagerberg","raw_affiliation_strings":["AstraZeneca SE , 43150 M\u00f6lndal, Sweden"],"affiliations":[{"raw_affiliation_string":"AstraZeneca SE , 43150 M\u00f6lndal, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076917278","display_name":"Jaewoo Kang","orcid":"https://orcid.org/0000-0001-6798-9106"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Jaewoo Kang","raw_affiliation_strings":["AIGEN Sciences Inc. , Seoul 04778, South Korea","Department of Computer Science and Engineering, Korea University , Seoul 02841, South Korea"],"affiliations":[{"raw_affiliation_string":"AIGEN Sciences Inc. , Seoul 04778, South Korea","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Korea University , Seoul 02841, South Korea","institution_ids":["https://openalex.org/I197347611"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5076917278","https://openalex.org/A5111019897"],"corresponding_institution_ids":["https://openalex.org/I197347611","https://openalex.org/I4210143795"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.7579,"has_fulltext":false,"cited_by_count":24,"citation_normalized_percentile":{"value":0.91324564,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"38","issue":"15","first_page":"3794","last_page":"3801"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8047307133674622},{"id":"https://openalex.org/keywords/question-answering","display_name":"Question answering","score":0.7891100645065308},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5979098677635193},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.57773756980896},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.47049403190612793},{"id":"https://openalex.org/keywords/span","display_name":"Span (engineering)","score":0.45858949422836304},{"id":"https://openalex.org/keywords/questions-and-answers","display_name":"Questions and answers","score":0.41481250524520874},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.32802242040634155}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8047307133674622},{"id":"https://openalex.org/C44291984","wikidata":"https://www.wikidata.org/wiki/Q1074173","display_name":"Question answering","level":2,"score":0.7891100645065308},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5979098677635193},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.57773756980896},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.47049403190612793},{"id":"https://openalex.org/C2778753569","wikidata":"https://www.wikidata.org/wiki/Q1960395","display_name":"Span (engineering)","level":2,"score":0.45858949422836304},{"id":"https://openalex.org/C3019144022","wikidata":"https://www.wikidata.org/wiki/Q4124998","display_name":"Questions and answers","level":2,"score":0.41481250524520874},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.32802242040634155},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C147176958","wikidata":"https://www.wikidata.org/wiki/Q77590","display_name":"Civil engineering","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btac397","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac397","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/15/3794/45213136/btac397.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35713500","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35713500","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:arXiv.org:2104.07535","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2104.07535","pdf_url":"https://arxiv.org/pdf/2104.07535","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:9344839","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9344839","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac397","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac397","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/15/3794/45213136/btac397.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2025626218","display_name":null,"funder_award_id":"NRF-2014M3C9A3063541","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G835223354","display_name":null,"funder_award_id":"NRF-2020R1A2C3010638","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"}],"funders":[{"id":"https://openalex.org/F4320322107","display_name":"Korea Health Industry Development Institute","ror":"https://ror.org/00fdzyk40"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3156000544.pdf","grobid_xml":"https://content.openalex.org/works/W3156000544.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W930994","https://openalex.org/W646327387","https://openalex.org/W1544827683","https://openalex.org/W1940872118","https://openalex.org/W1967670002","https://openalex.org/W1981208470","https://openalex.org/W2064675550","https://openalex.org/W2093157872","https://openalex.org/W2098146716","https://openalex.org/W2106121453","https://openalex.org/W2125313055","https://openalex.org/W2130949586","https://openalex.org/W2131774270","https://openalex.org/W2144578941","https://openalex.org/W2525778437","https://openalex.org/W2551396370","https://openalex.org/W2558203065","https://openalex.org/W2626154462","https://openalex.org/W2734608416","https://openalex.org/W2781827132","https://openalex.org/W2889787757","https://openalex.org/W2890830728","https://openalex.org/W2896457183","https://openalex.org/W2911489562","https://openalex.org/W2912924812","https://openalex.org/W2946659172","https://openalex.org/W2949615363","https://openalex.org/W2949922292","https://openalex.org/W2951534261","https://openalex.org/W2953271402","https://openalex.org/W2963323070","https://openalex.org/W2963488798","https://openalex.org/W2963748441","https://openalex.org/W2963957489","https://openalex.org/W2970482702","https://openalex.org/W2971258845","https://openalex.org/W2977131552","https://openalex.org/W3005049267","https://openalex.org/W3013183258","https://openalex.org/W3013838212","https://openalex.org/W3034229721","https://openalex.org/W3035625205","https://openalex.org/W3035763680","https://openalex.org/W3037869352","https://openalex.org/W3038495045","https://openalex.org/W3046375318","https://openalex.org/W3095609828","https://openalex.org/W3098324846","https://openalex.org/W3105491236","https://openalex.org/W3134469526","https://openalex.org/W3173520982","https://openalex.org/W6600034624","https://openalex.org/W6729938257","https://openalex.org/W6781031682"],"related_works":["https://openalex.org/W2118632115","https://openalex.org/W2555213299","https://openalex.org/W2576107865","https://openalex.org/W3215363805","https://openalex.org/W1846393350","https://openalex.org/W3154330131","https://openalex.org/W4307481286","https://openalex.org/W1990306092","https://openalex.org/W4226441484","https://openalex.org/W1973554190"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
