{"id":"https://openalex.org/W4224228117","doi":"https://doi.org/10.1093/bioinformatics/btac284","title":"Dug: a semantic search engine leveraging peer-reviewed knowledge to query biomedical data repositories","display_name":"Dug: a semantic search engine leveraging peer-reviewed knowledge to query biomedical data repositories","publication_year":2022,"publication_date":"2022-04-15","ids":{"openalex":"https://openalex.org/W4224228117","doi":"https://doi.org/10.1093/bioinformatics/btac284","pmid":"https://pubmed.ncbi.nlm.nih.gov/35441678"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac284","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac284","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9991886","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059108414","display_name":"Alexander Waldrop","orcid":"https://orcid.org/0000-0002-4502-7894"},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Alexander M Waldrop","raw_affiliation_strings":["Center for Genomics, Bioinformatics, and Translational Research, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Center for Genomics, Bioinformatics, and Translational Research, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007446672","display_name":"John B. Cheadle","orcid":"https://orcid.org/0000-0002-0106-4415"},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John B Cheadle","raw_affiliation_strings":["Research Computing Division, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Research Computing Division, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076606090","display_name":"Kira Bradford","orcid":"https://orcid.org/0000-0003-2403-817X"},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kira Bradford","raw_affiliation_strings":["Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067569497","display_name":"Alexander Preiss","orcid":"https://orcid.org/0000-0002-7966-527X"},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Preiss","raw_affiliation_strings":["Center for Data Science, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Science, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078399314","display_name":"Robert Chew","orcid":"https://orcid.org/0000-0002-6979-1766"},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Chew","raw_affiliation_strings":["Center for Data Science, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Science, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060536869","display_name":"Jonathan R. Holt","orcid":"https://orcid.org/0000-0001-6791-7858"},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan R Holt","raw_affiliation_strings":["Center for Data Science, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Science, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056177526","display_name":"Yaphet Kebede","orcid":"https://orcid.org/0000-0002-5046-0246"},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yaphet Kebede","raw_affiliation_strings":["Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042724586","display_name":"Nathan Braswell","orcid":null},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathan Braswell","raw_affiliation_strings":["Research Computing Division, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Research Computing Division, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085116922","display_name":"Matt Watson","orcid":null},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matt Watson","raw_affiliation_strings":["Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007353394","display_name":"Virginia K. Hench","orcid":"https://orcid.org/0000-0002-3612-8036"},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Virginia Hench","raw_affiliation_strings":["Center for Genomics, Bioinformatics, and Translational Research, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Center for Genomics, Bioinformatics, and Translational Research, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035476685","display_name":"Andrew Crerar","orcid":null},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Crerar","raw_affiliation_strings":["Center for Genomics, Bioinformatics, and Translational Research, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Center for Genomics, Bioinformatics, and Translational Research, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041559668","display_name":"Chris M Ball","orcid":null},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris M Ball","raw_affiliation_strings":["Research Computing Division, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Research Computing Division, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065463656","display_name":"Carl Schreep","orcid":null},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carl Schreep","raw_affiliation_strings":["Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026823926","display_name":"P J Linebaugh","orcid":null},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P J Linebaugh","raw_affiliation_strings":["Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048508245","display_name":"Hannah Hiles","orcid":"https://orcid.org/0000-0003-3974-0471"},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hannah Hiles","raw_affiliation_strings":["Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021605417","display_name":"Rebecca Boyles","orcid":"https://orcid.org/0000-0003-0073-6854"},"institutions":[{"id":"https://openalex.org/I180297670","display_name":"RTI International","ror":"https://ror.org/052tfza37","country_code":"US","type":"funder","lineage":["https://openalex.org/I180297670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rebecca Boyles","raw_affiliation_strings":["Research Computing Division, RTI International , Research Triangle Park, NC 27709-2194, USA"],"affiliations":[{"raw_affiliation_string":"Research Computing Division, RTI International , Research Triangle Park, NC 27709-2194, USA","institution_ids":["https://openalex.org/I180297670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043972221","display_name":"Chris Bizon","orcid":null},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris Bizon","raw_affiliation_strings":["Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089183504","display_name":"Ashok Krishnamurthy","orcid":"https://orcid.org/0000-0002-3215-7622"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ashok Krishnamurthy","raw_affiliation_strings":["Department of Computer Science, University of North Carolina at Chapel Hill , Chapel Hill, NC 27599-7548, USA","Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of North Carolina at Chapel Hill , Chapel Hill, NC 27599-7548, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087422387","display_name":"Steve Cox","orcid":null},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Steve Cox","raw_affiliation_strings":["Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of Chapel Hill, North Carolina , Chapel Hill, NC 27599-7568, USA","institution_ids":["https://openalex.org/I69048370"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":19,"corresponding_author_ids":["https://openalex.org/A5059108414","https://openalex.org/A5087422387"],"corresponding_institution_ids":["https://openalex.org/I180297670","https://openalex.org/I69048370"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.3474,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.54485263,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"38","issue":"12","first_page":"3252","last_page":"3258"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6752873659133911},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.624471127986908},{"id":"https://openalex.org/keywords/recall","display_name":"Recall","score":0.5229706764221191},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.506622850894928},{"id":"https://openalex.org/keywords/semantic-search","display_name":"Semantic search","score":0.4990999698638916},{"id":"https://openalex.org/keywords/software-deployment","display_name":"Software deployment","score":0.45729291439056396},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4566170573234558},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.43498462438583374},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3436882495880127}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6752873659133911},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.624471127986908},{"id":"https://openalex.org/C100660578","wikidata":"https://www.wikidata.org/wiki/Q18733","display_name":"Recall","level":2,"score":0.5229706764221191},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.506622850894928},{"id":"https://openalex.org/C166423231","wikidata":"https://www.wikidata.org/wiki/Q1891170","display_name":"Semantic search","level":3,"score":0.4990999698638916},{"id":"https://openalex.org/C105339364","wikidata":"https://www.wikidata.org/wiki/Q2297740","display_name":"Software deployment","level":2,"score":0.45729291439056396},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4566170573234558},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.43498462438583374},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3436882495880127},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btac284","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac284","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35441678","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35441678","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9991886","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9991886","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:9991886","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9991886","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.4300000071525574}],"awards":[{"id":"https://openalex.org/G3822523352","display_name":null,"funder_award_id":"1-OT3-TR002020-01","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G6125560819","display_name":null,"funder_award_id":"1-OT3-HL142479-01","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"}],"funders":[{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W1572535120","https://openalex.org/W1766258292","https://openalex.org/W2098693458","https://openalex.org/W2114330474","https://openalex.org/W2138482856","https://openalex.org/W2159583324","https://openalex.org/W2161693184","https://openalex.org/W2302501749","https://openalex.org/W2381442930","https://openalex.org/W2558643140","https://openalex.org/W2618327808","https://openalex.org/W2783207633","https://openalex.org/W2808146399","https://openalex.org/W2897782208","https://openalex.org/W2950031835","https://openalex.org/W2969723769","https://openalex.org/W2973113902","https://openalex.org/W2990374909","https://openalex.org/W2996036406","https://openalex.org/W3003257820","https://openalex.org/W3042438073","https://openalex.org/W3102245839","https://openalex.org/W3103145119","https://openalex.org/W3127783647","https://openalex.org/W3154620011","https://openalex.org/W4205170775","https://openalex.org/W4255757807","https://openalex.org/W6637948825"],"related_works":["https://openalex.org/W2358294942","https://openalex.org/W2359166167","https://openalex.org/W3590553","https://openalex.org/W3110844189","https://openalex.org/W4297963434","https://openalex.org/W2098875573","https://openalex.org/W2153030345","https://openalex.org/W1976839151","https://openalex.org/W2336826532","https://openalex.org/W3040185272"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2022,"cited_by_count":1}],"updated_date":"2026-04-04T08:04:53.788161","created_date":"2025-10-10T00:00:00"}
