{"id":"https://openalex.org/W3161797715","doi":"https://doi.org/10.1093/bioinformatics/btab384","title":"Autoencoder-based drug\u2013target interaction prediction by preserving the consistency of chemical properties and functions of drugs","display_name":"Autoencoder-based drug\u2013target interaction prediction by preserving the consistency of chemical properties and functions of drugs","publication_year":2021,"publication_date":"2021-05-18","ids":{"openalex":"https://openalex.org/W3161797715","doi":"https://doi.org/10.1093/bioinformatics/btab384","mag":"3161797715","pmid":"https://pubmed.ncbi.nlm.nih.gov/34019069"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab384","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab384","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058107064","display_name":"Chang Sun","orcid":"https://orcid.org/0000-0001-8564-0856"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chang Sun","raw_affiliation_strings":["College of Computer Science, Nankai University , Tianjin 300071, China","Institute of Big Data, Nankai University , Tianjin 300071, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Nankai University , Tianjin 300071, China","institution_ids":["https://openalex.org/I205237279"]},{"raw_affiliation_string":"Institute of Big Data, Nankai University , Tianjin 300071, China","institution_ids":["https://openalex.org/I205237279"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063039985","display_name":"Yangkun Cao","orcid":"https://orcid.org/0000-0001-7240-5486"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yangkun Cao","raw_affiliation_strings":["School of Artificial Intelligence, Jilin University , Changchun 130012, China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence, Jilin University , Changchun 130012, China","institution_ids":["https://openalex.org/I194450716"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037600606","display_name":"Jinmao Wei","orcid":"https://orcid.org/0000-0003-0809-6687"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jin-Mao Wei","raw_affiliation_strings":["College of Computer Science, Nankai University , Tianjin 300071, China","Institute of Big Data, Nankai University , Tianjin 300071, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Nankai University , Tianjin 300071, China","institution_ids":["https://openalex.org/I205237279"]},{"raw_affiliation_string":"Institute of Big Data, Nankai University , Tianjin 300071, China","institution_ids":["https://openalex.org/I205237279"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100414608","display_name":"Jian Liu","orcid":"https://orcid.org/0000-0001-5516-0157"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Liu","raw_affiliation_strings":["College of Computer Science, Nankai University , Tianjin 300071, China","Institute of Big Data, Nankai University , Tianjin 300071, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Nankai University , Tianjin 300071, China","institution_ids":["https://openalex.org/I205237279"]},{"raw_affiliation_string":"Institute of Big Data, Nankai University , Tianjin 300071, China","institution_ids":["https://openalex.org/I205237279"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5037600606","https://openalex.org/A5058107064"],"corresponding_institution_ids":["https://openalex.org/I205237279"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":5.031,"has_fulltext":false,"cited_by_count":45,"citation_normalized_percentile":{"value":0.95788835,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"37","issue":"20","first_page":"3618","last_page":"3625"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9739999771118164,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9657999873161316,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.7424397468566895},{"id":"https://openalex.org/keywords/autoencoder","display_name":"Autoencoder","score":0.7125471830368042},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6261129975318909},{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.516829788684845},{"id":"https://openalex.org/keywords/drug-target","display_name":"Drug target","score":0.4758719503879547},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.46370914578437805},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.4550101161003113},{"id":"https://openalex.org/keywords/chemical-space","display_name":"Chemical space","score":0.4447058439254761},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4345051348209381},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3791089951992035},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.30804407596588135},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.18933570384979248},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.16033896803855896},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15698635578155518},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11858141422271729},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.10390391945838928}],"concepts":[{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.7424397468566895},{"id":"https://openalex.org/C101738243","wikidata":"https://www.wikidata.org/wiki/Q786435","display_name":"Autoencoder","level":3,"score":0.7125471830368042},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6261129975318909},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.516829788684845},{"id":"https://openalex.org/C2989108626","wikidata":"https://www.wikidata.org/wiki/Q904407","display_name":"Drug target","level":2,"score":0.4758719503879547},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.46370914578437805},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.4550101161003113},{"id":"https://openalex.org/C99726746","wikidata":"https://www.wikidata.org/wiki/Q906396","display_name":"Chemical space","level":3,"score":0.4447058439254761},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4345051348209381},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3791089951992035},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.30804407596588135},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.18933570384979248},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.16033896803855896},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15698635578155518},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11858141422271729},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.10390391945838928}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btab384","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab384","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34019069","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34019069","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2617670910","display_name":null,"funder_award_id":"61772288","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3710949915","display_name":null,"funder_award_id":"18JCZDJC30900","funder_id":"https://openalex.org/F4320323993","funder_display_name":"Natural Science Foundation of Tianjin City"},{"id":"https://openalex.org/G4210662038","display_name":null,"funder_award_id":"61872115","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323993","display_name":"Natural Science Foundation of Tianjin City","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W1494052777","https://openalex.org/W1971387816","https://openalex.org/W1976526581","https://openalex.org/W1987520879","https://openalex.org/W1988037271","https://openalex.org/W2018408116","https://openalex.org/W2098502158","https://openalex.org/W2100495367","https://openalex.org/W2143594378","https://openalex.org/W2162011385","https://openalex.org/W2163694519","https://openalex.org/W2167212630","https://openalex.org/W2259538443","https://openalex.org/W2343107734","https://openalex.org/W2346950316","https://openalex.org/W2558586574","https://openalex.org/W2612690371","https://openalex.org/W2753953057","https://openalex.org/W2767891136","https://openalex.org/W2770261575","https://openalex.org/W2791560836","https://openalex.org/W2899663614","https://openalex.org/W2944974555","https://openalex.org/W2945027804","https://openalex.org/W2952522777","https://openalex.org/W2963403868","https://openalex.org/W2980767508","https://openalex.org/W2997680655","https://openalex.org/W3000043291","https://openalex.org/W3011056788","https://openalex.org/W3018980093","https://openalex.org/W3019745511","https://openalex.org/W3020483007","https://openalex.org/W3033050543","https://openalex.org/W3088070507","https://openalex.org/W3112755591","https://openalex.org/W3136918052","https://openalex.org/W4212774754","https://openalex.org/W4385245566","https://openalex.org/W6629750957","https://openalex.org/W6739901393","https://openalex.org/W6755977528","https://openalex.org/W6774493663","https://openalex.org/W6776743202","https://openalex.org/W6779142376"],"related_works":["https://openalex.org/W2973074952","https://openalex.org/W3010058077","https://openalex.org/W2920569584","https://openalex.org/W2951512731","https://openalex.org/W4283395020","https://openalex.org/W4400243266","https://openalex.org/W2046431380","https://openalex.org/W4392354878","https://openalex.org/W4320732452","https://openalex.org/W135095951"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
