{"id":"https://openalex.org/W3133585998","doi":"https://doi.org/10.1093/bioinformatics/btab126","title":"Granger-causal testing for irregularly sampled time series with application to nitrogen signalling in Arabidopsis","display_name":"Granger-causal testing for irregularly sampled time series with application to nitrogen signalling in Arabidopsis","publication_year":2021,"publication_date":"2021-03-04","ids":{"openalex":"https://openalex.org/W3133585998","doi":"https://doi.org/10.1093/bioinformatics/btab126","mag":"3133585998","pmid":"https://pubmed.ncbi.nlm.nih.gov/33693548"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab126","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab126","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/16/2450/39947230/btab126.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/37/16/2450/39947230/btab126.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5033930799","display_name":"Sachin Heerah","orcid":"https://orcid.org/0000-0002-6851-904X"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sachin Heerah","raw_affiliation_strings":["Department of Plant Biology, University of Illinois Urbana-Champaign , Urbana, IL 61801, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Biology, University of Illinois Urbana-Champaign , Urbana, IL 61801, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072855231","display_name":"Roberto Molinari","orcid":"https://orcid.org/0000-0001-8766-6902"},"institutions":[{"id":"https://openalex.org/I82497590","display_name":"Auburn University","ror":"https://ror.org/02v80fc35","country_code":"US","type":"education","lineage":["https://openalex.org/I82497590"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Roberto Molinari","raw_affiliation_strings":["Department of Mathematics and Statistics, Auburn University , Auburn, AL 36849, USA"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Statistics, Auburn University , Auburn, AL 36849, USA","institution_ids":["https://openalex.org/I82497590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083062363","display_name":"St\u00e9phane Guerrier","orcid":"https://orcid.org/0000-0003-0002-8794"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"St\u00e9phane Guerrier","raw_affiliation_strings":["Faculty of Science & Geneva School of Economics and Management, University of Geneva , Geneva 1205, Switzerland"],"affiliations":[{"raw_affiliation_string":"Faculty of Science & Geneva School of Economics and Management, University of Geneva , Geneva 1205, Switzerland","institution_ids":["https://openalex.org/I114457229"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073183275","display_name":"Amy Marshall\u2010Col\u00f3n","orcid":"https://orcid.org/0000-0001-6752-4982"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Amy Marshall-Colon","raw_affiliation_strings":["Department of Plant Biology, University of Illinois Urbana-Champaign , Urbana, IL 61801, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Biology, University of Illinois Urbana-Champaign , Urbana, IL 61801, USA","institution_ids":["https://openalex.org/I157725225"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5073183275"],"corresponding_institution_ids":["https://openalex.org/I157725225"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.6799,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.86636228,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"37","issue":"16","first_page":"2450","last_page":"2460"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10320","display_name":"Neural Networks and Applications","score":0.9729999899864197,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10320","display_name":"Neural Networks and Applications","score":0.9729999899864197,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9667999744415283,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11247","display_name":"Plant nutrient uptake and metabolism","score":0.9611999988555908,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/series","display_name":"Series (stratigraphy)","score":0.7005468010902405},{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.6714478731155396},{"id":"https://openalex.org/keywords/signalling","display_name":"Signalling","score":0.5116072297096252},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4746609032154083},{"id":"https://openalex.org/keywords/granger-causality","display_name":"Granger causality","score":0.4741503596305847},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3931342661380768},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.382117360830307},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.34640225768089294},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.34332647919654846},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.30615174770355225},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2028087079524994},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.19114524126052856},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.18713140487670898},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11676862835884094},{"id":"https://openalex.org/keywords/paleontology","display_name":"Paleontology","score":0.08069533109664917}],"concepts":[{"id":"https://openalex.org/C143724316","wikidata":"https://www.wikidata.org/wiki/Q312468","display_name":"Series (stratigraphy)","level":2,"score":0.7005468010902405},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.6714478731155396},{"id":"https://openalex.org/C39743133","wikidata":"https://www.wikidata.org/wiki/Q3262595","display_name":"Signalling","level":2,"score":0.5116072297096252},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4746609032154083},{"id":"https://openalex.org/C129824826","wikidata":"https://www.wikidata.org/wiki/Q2630107","display_name":"Granger causality","level":2,"score":0.4741503596305847},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3931342661380768},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.382117360830307},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.34640225768089294},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.34332647919654846},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.30615174770355225},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2028087079524994},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.19114524126052856},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.18713140487670898},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11676862835884094},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.08069533109664917},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btab126","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab126","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/16/2450/39947230/btab126.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33693548","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33693548","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8388030","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8388030","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btab126","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab126","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/16/2450/39947230/btab126.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1155803521","display_name":null,"funder_award_id":"SES-1534433","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7336094271","display_name":null,"funder_award_id":"176843","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G7473227215","display_name":null,"funder_award_id":"SES-182582","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8565579009","display_name":null,"funder_award_id":"SES-1853209","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3133585998.pdf","grobid_xml":"https://content.openalex.org/works/W3133585998.grobid-xml"},"referenced_works_count":107,"referenced_works":["https://openalex.org/W98106896","https://openalex.org/W1059838004","https://openalex.org/W1515620629","https://openalex.org/W1564768010","https://openalex.org/W1650504959","https://openalex.org/W1794041833","https://openalex.org/W1949139897","https://openalex.org/W1963843265","https://openalex.org/W1969191707","https://openalex.org/W1971099877","https://openalex.org/W1975238322","https://openalex.org/W1977512462","https://openalex.org/W1978829017","https://openalex.org/W1989921625","https://openalex.org/W1990775762","https://openalex.org/W2016758813","https://openalex.org/W2034750140","https://openalex.org/W2034940025","https://openalex.org/W2040575507","https://openalex.org/W2047694274","https://openalex.org/W2052510931","https://openalex.org/W2064827935","https://openalex.org/W2069508080","https://openalex.org/W2070539328","https://openalex.org/W2082171818","https://openalex.org/W2082480074","https://openalex.org/W2084819158","https://openalex.org/W2088410574","https://openalex.org/W2091192245","https://openalex.org/W2091471193","https://openalex.org/W2091484108","https://openalex.org/W2094490427","https://openalex.org/W2096195756","https://openalex.org/W2097818711","https://openalex.org/W2097879961","https://openalex.org/W2098225750","https://openalex.org/W2100453383","https://openalex.org/W2103453943","https://openalex.org/W2104388974","https://openalex.org/W2108934199","https://openalex.org/W2109110326","https://openalex.org/W2115021853","https://openalex.org/W2118843652","https://openalex.org/W2123836320","https://openalex.org/W2124080033","https://openalex.org/W2128827801","https://openalex.org/W2128901331","https://openalex.org/W2129506203","https://openalex.org/W2134536857","https://openalex.org/W2136905758","https://openalex.org/W2141314326","https://openalex.org/W2141806364","https://openalex.org/W2143103243","https://openalex.org/W2144738674","https://openalex.org/W2145241076","https://openalex.org/W2148636094","https://openalex.org/W2152563020","https://openalex.org/W2165557989","https://openalex.org/W2168936979","https://openalex.org/W2170094523","https://openalex.org/W2178225550","https://openalex.org/W2264908887","https://openalex.org/W2270163269","https://openalex.org/W2270573680","https://openalex.org/W2320741016","https://openalex.org/W2329462941","https://openalex.org/W2397362117","https://openalex.org/W2401562190","https://openalex.org/W2464741734","https://openalex.org/W2465917224","https://openalex.org/W2481151430","https://openalex.org/W2492078868","https://openalex.org/W2512336396","https://openalex.org/W2519651264","https://openalex.org/W2534005632","https://openalex.org/W2560684392","https://openalex.org/W2564898647","https://openalex.org/W2593181830","https://openalex.org/W2600663167","https://openalex.org/W2605231723","https://openalex.org/W2754282834","https://openalex.org/W2760188895","https://openalex.org/W2774591214","https://openalex.org/W2784007581","https://openalex.org/W2784400464","https://openalex.org/W2793300001","https://openalex.org/W2793341721","https://openalex.org/W2798058877","https://openalex.org/W2803763306","https://openalex.org/W2804964047","https://openalex.org/W2804983295","https://openalex.org/W2891430899","https://openalex.org/W2896055880","https://openalex.org/W2917928579","https://openalex.org/W2926872350","https://openalex.org/W2949950598","https://openalex.org/W2980443086","https://openalex.org/W2982727058","https://openalex.org/W3103967557","https://openalex.org/W3105664932","https://openalex.org/W3146166473","https://openalex.org/W3165771198","https://openalex.org/W4232297163","https://openalex.org/W4241115065","https://openalex.org/W4298872162","https://openalex.org/W6680722016","https://openalex.org/W6728568933"],"related_works":["https://openalex.org/W3147805512","https://openalex.org/W1976583488","https://openalex.org/W46439636","https://openalex.org/W3149522072","https://openalex.org/W2776744275","https://openalex.org/W2804364832","https://openalex.org/W4388695760","https://openalex.org/W4389574364","https://openalex.org/W3026522683","https://openalex.org/W3121434756"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}