{"id":"https://openalex.org/W3097372521","doi":"https://doi.org/10.1093/bioinformatics/btaa946","title":"Agile workflow for interactive analysis of mass cytometry data","display_name":"Agile workflow for interactive analysis of mass cytometry data","publication_year":2020,"publication_date":"2020-10-27","ids":{"openalex":"https://openalex.org/W3097372521","doi":"https://doi.org/10.1093/bioinformatics/btaa946","mag":"3097372521","pmid":"https://pubmed.ncbi.nlm.nih.gov/33135052"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa946","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa946","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/9/1263/38575192/btaa946.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/37/9/1263/38575192/btaa946.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016536227","display_name":"Julia Casado","orcid":"https://orcid.org/0000-0002-3662-8794"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Julia Casado","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland"],"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081196739","display_name":"Oskari Lehtonen","orcid":"https://orcid.org/0000-0001-7006-8877"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Oskari Lehtonen","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland"],"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061046234","display_name":"Ville Rantanen","orcid":"https://orcid.org/0000-0002-0105-7071"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Ville Rantanen","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland"],"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068244748","display_name":"Katja Kaipio","orcid":"https://orcid.org/0000-0001-5978-1217"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Katja Kaipio","raw_affiliation_strings":["Department of Pathology, University of Turku , Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, University of Turku , Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033041141","display_name":"Luca Pasquini","orcid":"https://orcid.org/0000-0002-3484-6288"},"institutions":[{"id":"https://openalex.org/I27897274","display_name":"Istituto Superiore di Sanit\u00e0","ror":"https://ror.org/02hssy432","country_code":"IT","type":"government","lineage":["https://openalex.org/I27897274"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Luca Pasquini","raw_affiliation_strings":["Istituto Superiore di Sanit\u00e0, Core Facilities , Rome, Italy"],"affiliations":[{"raw_affiliation_string":"Istituto Superiore di Sanit\u00e0, Core Facilities , Rome, Italy","institution_ids":["https://openalex.org/I27897274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033673376","display_name":"Antti H\u00e4kkinen","orcid":"https://orcid.org/0000-0002-8081-1588"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Antti H\u00e4kkinen","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland"],"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013989777","display_name":"Eleonora Petrucci","orcid":"https://orcid.org/0000-0001-6459-490X"},"institutions":[{"id":"https://openalex.org/I27897274","display_name":"Istituto Superiore di Sanit\u00e0","ror":"https://ror.org/02hssy432","country_code":"IT","type":"government","lineage":["https://openalex.org/I27897274"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Elenora Petrucci","raw_affiliation_strings":["Istituto Superiore di Sanit\u00e0, Department of Haematology , Rome, Italy"],"affiliations":[{"raw_affiliation_string":"Istituto Superiore di Sanit\u00e0, Department of Haematology , Rome, Italy","institution_ids":["https://openalex.org/I27897274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044104350","display_name":"Johanna Hynninen","orcid":"https://orcid.org/0000-0002-0854-7225"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I2801970007","display_name":"Turku University Hospital","ror":"https://ror.org/05dbzj528","country_code":"FI","type":"healthcare","lineage":["https://openalex.org/I2801970007","https://openalex.org/I4210127022"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Johanna Hynninen","raw_affiliation_strings":["Department of Obstetrics and Gynecology, Turku University Hospital, University of Turku , Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Turku University Hospital, University of Turku , Turku, Finland","institution_ids":["https://openalex.org/I2801970007","https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081022486","display_name":"Sakari Hietanen","orcid":"https://orcid.org/0000-0003-4734-4743"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I2801970007","display_name":"Turku University Hospital","ror":"https://ror.org/05dbzj528","country_code":"FI","type":"healthcare","lineage":["https://openalex.org/I2801970007","https://openalex.org/I4210127022"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Sakari Hietanen","raw_affiliation_strings":["Department of Obstetrics and Gynecology, Turku University Hospital, University of Turku , Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Turku University Hospital, University of Turku , Turku, Finland","institution_ids":["https://openalex.org/I2801970007","https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030148031","display_name":"Olli Carp\u00e9n","orcid":"https://orcid.org/0000-0002-7847-5706"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Olli Carp\u00e9n","raw_affiliation_strings":["Department of Pathology, University of Turku , Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, University of Turku , Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008502451","display_name":"Mauro Biffoni","orcid":"https://orcid.org/0000-0002-1304-9060"},"institutions":[{"id":"https://openalex.org/I27897274","display_name":"Istituto Superiore di Sanit\u00e0","ror":"https://ror.org/02hssy432","country_code":"IT","type":"government","lineage":["https://openalex.org/I27897274"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Mauro Biffoni","raw_affiliation_strings":["Istituto Superiore di Sanit\u00e0, Department of Haematology , Rome, Italy"],"affiliations":[{"raw_affiliation_string":"Istituto Superiore di Sanit\u00e0, Department of Haematology , Rome, Italy","institution_ids":["https://openalex.org/I27897274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077967611","display_name":"Anniina F\u00e4rkkil\u00e4","orcid":"https://orcid.org/0000-0002-3558-6617"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I2800394112","display_name":"Helsinki University Hospital","ror":"https://ror.org/02e8hzf44","country_code":"FI","type":"healthcare","lineage":["https://openalex.org/I2800394112","https://openalex.org/I4210166427"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]}],"countries":["FI","US"],"is_corresponding":false,"raw_author_name":"Anniina F\u00e4rkkil\u00e4","raw_affiliation_strings":["Department of Obstetrics and Gynecology, Helsinki University Hospital , Helsinki, Finland","Laboratory of Systems Pharmacology, Harvard Medical School and Dana-Farber Cancer Institute , Boston, MA, USA","Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Helsinki University Hospital , Helsinki, Finland","institution_ids":["https://openalex.org/I2800394112"]},{"raw_affiliation_string":"Laboratory of Systems Pharmacology, Harvard Medical School and Dana-Farber Cancer Institute , Boston, MA, USA","institution_ids":["https://openalex.org/I4210117453","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033102814","display_name":"Sampsa Hautaniemi","orcid":"https://orcid.org/0000-0002-7749-2694"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Sampsa Hautaniemi","raw_affiliation_strings":["Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland"],"affiliations":[{"raw_affiliation_string":"Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki , Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":13,"corresponding_author_ids":["https://openalex.org/A5033102814"],"corresponding_institution_ids":["https://openalex.org/I133731052"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.7524,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.70181993,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"37","issue":"9","first_page":"1263","last_page":"1268"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9761999845504761,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9542999863624573,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mass-cytometry","display_name":"Mass cytometry","score":0.8034318089485168},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.794927716255188},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6663765907287598},{"id":"https://openalex.org/keywords/agile-software-development","display_name":"Agile software development","score":0.6154294013977051},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4308450520038605},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4036991000175476},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.403106689453125},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.32127779722213745},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.26801878213882446},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.24854111671447754},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1668989658355713}],"concepts":[{"id":"https://openalex.org/C2778015335","wikidata":"https://www.wikidata.org/wiki/Q17051163","display_name":"Mass cytometry","level":4,"score":0.8034318089485168},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.794927716255188},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6663765907287598},{"id":"https://openalex.org/C14185376","wikidata":"https://www.wikidata.org/wiki/Q30232","display_name":"Agile software development","level":2,"score":0.6154294013977051},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4308450520038605},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4036991000175476},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.403106689453125},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.32127779722213745},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.26801878213882446},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.24854111671447754},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1668989658355713},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btaa946","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa946","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/9/1263/38575192/btaa946.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33135052","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33135052","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:helda.helsinki.fi:10138/339321","is_oa":true,"landing_page_url":"http://hdl.handle.net/10138/339321","pdf_url":null,"source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8189671","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8189671","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaa946","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa946","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/9/1263/38575192/btaa946.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2193812721","display_name":null,"funder_award_id":"322927","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G4956428346","display_name":null,"funder_award_id":"Horizon 2020 research and innovatio","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5036817778","display_name":null,"funder_award_id":"European Union's Horizon 2020 research and innov","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6602195238","display_name":null,"funder_award_id":"667403","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G7842005466","display_name":null,"funder_award_id":"Horizon 2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8633428685","display_name":null,"funder_award_id":"European Union's Horizon 2020 research and innovat","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320323760","display_name":"Sigrid Jus\u00e9liuksen S\u00e4\u00e4ti\u00f6","ror":"https://ror.org/00ckakm23"},{"id":"https://openalex.org/F4320325101","display_name":"Instrumentariumin Tiedes\u00e4\u00e4ti\u00f6","ror":"https://ror.org/02w907m39"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3097372521.pdf","grobid_xml":"https://content.openalex.org/works/W3097372521.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1980081406","https://openalex.org/W1982729887","https://openalex.org/W2073256527","https://openalex.org/W2075782148","https://openalex.org/W2158333823","https://openalex.org/W2187089797","https://openalex.org/W2387281789","https://openalex.org/W2464824038","https://openalex.org/W2522948376","https://openalex.org/W2590015116","https://openalex.org/W2618433578","https://openalex.org/W2768365920","https://openalex.org/W2899253101","https://openalex.org/W2908624452","https://openalex.org/W2917744165","https://openalex.org/W2951566836","https://openalex.org/W2951764674","https://openalex.org/W4240098044","https://openalex.org/W6683425649"],"related_works":["https://openalex.org/W2766989726","https://openalex.org/W2952723901","https://openalex.org/W2053129129","https://openalex.org/W4251194061","https://openalex.org/W4386301123","https://openalex.org/W2738798767","https://openalex.org/W4200474388","https://openalex.org/W2342330592","https://openalex.org/W2342183549","https://openalex.org/W3000152097"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
